RNA–Protein interactions for RNA: ENST00000477696.5

CD40-205, Transcript of CD40 molecule, humanhuman

TSL 5

Gene CD40, Length 771 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-205ENST00000477696 CCDC30Q5VVM6 783 aa11.1□□□□□ -0.63
CD40-205ENST00000477696 ANKRD13DQ6ZTN6 518 aa11.1□□□□□ -0.63
CD40-205ENST00000477696 PLBD2Q8NHP8 589 aa11.1□□□□□ -0.63
CD40-205ENST00000477696 CNKSR2Q8WXI2 1034 aa11.1□□□□□ -0.63
CD40-205ENST00000477696 NMRK2Q9NPI5 230 aa11.1□□□□□ -0.63
CD40-205ENST00000477696 ELL2O00472 640 aaPredicted RBP11.09□□□□□ -0.63
CD40-205ENST00000477696 TCIRG1Q13488 830 aa11.09□□□□□ -0.63
CD40-205ENST00000477696 SUSD4Q5VX71 490 aa11.09□□□□□ -0.63
CD40-205ENST00000477696 C8orf58Q8NAV2 365 aa11.09□□□□□ -0.63
CD40-205ENST00000477696 UTP14AQ9BVJ6 771 aaKnown RBP11.09□□□□□ -0.63
CD40-205ENST00000477696 UBN2Q6ZU65 1347 aa11.09□□□□□ -0.63
CD40-205ENST00000477696 DDX58O95786 925 aaKnown RBP11.08□□□□□ -0.64
CD40-205ENST00000477696 LMNB1P20700 586 aa11.08□□□□□ -0.64
CD40-205ENST00000477696 GOLGA2Q08379 1002 aa11.08□□□□□ -0.64
CD40-205ENST00000477696 ERFEQ4G0M1 354 aa11.08□□□□□ -0.64
CD40-205ENST00000477696 STK31Q9BXU1 1019 aa11.08□□□□□ -0.64
CD40-205ENST00000477696 RNF181Q9P0P0 153 aa11.08□□□□□ -0.64
CD40-205ENST00000477696 CCER2I3L3R5 266 aa11.07□□□□□ -0.64
CD40-205ENST00000477696 C21orf2O43822 256 aa11.07□□□□□ -0.64
CD40-205ENST00000477696 NTSR2O95665 410 aa11.07□□□□□ -0.64
CD40-205ENST00000477696 PRELPP51888 382 aa11.07□□□□□ -0.64
CD40-205ENST00000477696 RASSF7Q02833 373 aa11.07□□□□□ -0.64
CD40-205ENST00000477696 TWISTNBQ3B726 338 aaPredicted RBP11.07□□□□□ -0.64
CD40-205ENST00000477696 SLC10A5Q5PT55 438 aa11.07□□□□□ -0.64
CD40-205ENST00000477696 PRPF40BQ6NWY9 871 aaKnown RBP11.07□□□□□ -0.64
CD40-205ENST00000477696 NLRP10Q86W26 655 aa11.07□□□□□ -0.64
CD40-205ENST00000477696 NUTM1Q86Y26 1132 aa11.07□□□□□ -0.64
CD40-205ENST00000477696 RBM46Q8TBY0 533 aaKnown RBP11.07□□□□□ -0.64
CD40-205ENST00000477696 RPGRQ92834 1020 aaKnown RBP11.07□□□□□ -0.64
CD40-205ENST00000477696 TSR2Q969E8 191 aaKnown RBP11.07□□□□□ -0.64
CD40-205ENST00000477696 NLRP3Q96P20 1036 aa11.07□□□□□ -0.64
CD40-205ENST00000477696 MYH16Q9H6N6 1097 aa11.07□□□□□ -0.64
CD40-205ENST00000477696 SALL2Q9Y467 1007 aaPredicted RBP11.07□□□□□ -0.64
CD40-205ENST00000477696 ANKRD36CQ5JPF3 1778 aa11.07□□□□□ -0.64
CD40-205ENST00000477696 RIC1Q4ADV7 1423 aa11.07□□□□□ -0.64
CD40-205ENST00000477696 KDM2BQ8NHM5 1336 aa11.07□□□□□ -0.64
CD40-205ENST00000477696 HSP90B1P14625 803 aaKnown RBP11.06□□□□□ -0.64
CD40-205ENST00000477696 HOXA10P31260 410 aaPredicted RBP11.06□□□□□ -0.64
CD40-205ENST00000477696 APLP1P51693 650 aa11.06□□□□□ -0.64
CD40-205ENST00000477696 CRY2Q49AN0 593 aa11.06□□□□□ -0.64
CD40-205ENST00000477696 RIC3Q7Z5B4 369 aa11.06□□□□□ -0.64
CD40-205ENST00000477696 RBM17Q96I25 401 aaKnown RBP11.06□□□□□ -0.64
CD40-205ENST00000477696 RNF216Q9NWF9 866 aaPredicted RBP11.06□□□□□ -0.64
CD40-205ENST00000477696 TRMT112Q9UI30 125 aaKnown RBP11.06□□□□□ -0.64
CD40-205ENST00000477696 SCN4AP35499 1836 aa11.05□□□□□ -0.64
CD40-205ENST00000477696 NFKBIEO00221 500 aa11.05□□□□□ -0.64
CD40-205ENST00000477696 TRIM28Q13263 835 aaKnown RBP11.05□□□□□ -0.64
CD40-205ENST00000477696 GRIPAP1Q4V328 841 aa11.05□□□□□ -0.64
CD40-205ENST00000477696 CC2D2BQ6DHV5 1058 aa11.05□□□□□ -0.64
CD40-205ENST00000477696 RTKN2Q8IZC4 609 aa11.05□□□□□ -0.64
CD40-205ENST00000477696 CRAMP1Q96RY5 1269 aa11.05□□□□□ -0.64
CD40-205ENST00000477696 TMX4Q9H1E5 349 aaPredicted RBP11.05□□□□□ -0.64
CD40-205ENST00000477696 TAOK3Q9H2K8 898 aa11.05□□□□□ -0.64
CD40-205ENST00000477696 ZNF219Q9P2Y4 722 aaPredicted RBP11.05□□□□□ -0.64
CD40-205ENST00000477696 SH3TC1Q8TE82 1336 aa11.05□□□□□ -0.64
CD40-205ENST00000477696 LTBP3Q9NS15 1303 aa11.05□□□□□ -0.64
CD40-205ENST00000477696 FANCIQ9NVI1 1328 aa11.05□□□□□ -0.64
CD40-205ENST00000477696 ABCC12Q96J65 1359 aa11.04□□□□□ -0.64
CD40-205ENST00000477696 FSTL1Q12841 308 aa11.04□□□□□ -0.64
CD40-205ENST00000477696 CCDC93Q567U6 631 aa11.04□□□□□ -0.64
CD40-205ENST00000477696 TSPYL6Q8N831 410 aa11.04□□□□□ -0.64
CD40-205ENST00000477696 ISCA1Q9BUE6 129 aa11.04□□□□□ -0.64
CD40-205ENST00000477696 ADAMTSL1Q8N6G6 1762 aa11.03□□□□□ -0.64
CD40-205ENST00000477696 CACNA1FO60840 1977 aa11.03□□□□□ -0.64
CD40-205ENST00000477696 SLC4A2P04920 1241 aa11.03□□□□□ -0.64
CD40-205ENST00000477696 DNAJC5GQ8N7S2 189 aa11.03□□□□□ -0.64
CD40-205ENST00000477696 C7orf43Q8WVR3 580 aa11.03□□□□□ -0.64
CD40-205ENST00000477696 PHAXQ9H814 394 aaKnown RBP11.03□□□□□ -0.64
CD40-205ENST00000477696 LAMB2P55268 1798 aa11.03□□□□□ -0.64
CD40-205ENST00000477696 GLTPD2A6NH11 291 aa11.02□□□□□ -0.65
CD40-205ENST00000477696 ATP5J2-PTCD1G3V325 749 aa11.02□□□□□ -0.65
CD40-205ENST00000477696 EXOSC9Q06265 439 aaKnown RBP11.02□□□□□ -0.65
CD40-205ENST00000477696 NEXNQ0ZGT2 675 aa11.02□□□□□ -0.65
CD40-205ENST00000477696 KSR2Q6VAB6 950 aa11.02□□□□□ -0.65
CD40-205ENST00000477696 DDX46Q7L014 1031 aaKnown RBP11.02□□□□□ -0.65
CD40-205ENST00000477696 CCDC191Q8NCU4 936 aa11.02□□□□□ -0.65
CD40-205ENST00000477696 METTL22Q9BUU2 404 aaPredicted RBP11.02□□□□□ -0.65
CD40-205ENST00000477696 SNED1Q8TER0 1413 aa11.01□□□□□ -0.65
CD40-205ENST00000477696 VAMP4O75379 141 aa11.01□□□□□ -0.65
CD40-205ENST00000477696 BBOX1O75936 387 aa11.01□□□□□ -0.65
CD40-205ENST00000477696 HCLS1P14317 486 aaPredicted RBP11.01□□□□□ -0.65
CD40-205ENST00000477696 FKBP4Q02790 459 aaKnown RBP eCLIP11.01□□□□□ -0.65
CD40-205ENST00000477696 DPY19L2Q6NUT2 758 aa11.01□□□□□ -0.65
CD40-205ENST00000477696 C16orf71Q8IYS4 520 aaPredicted RBP11.01□□□□□ -0.65
CD40-205ENST00000477696 CWC25Q9NXE8 425 aaPredicted RBP11.01□□□□□ -0.65
CD40-205ENST00000477696 MAP3K2Q9Y2U5 619 aa11.01□□□□□ -0.65
CD40-205ENST00000477696 E9PSI1 815 aa11□□□□□ -0.65
CD40-205ENST00000477696 PPEF1O14829 653 aaPredicted RBP11□□□□□ -0.65
CD40-205ENST00000477696 DIEXFQ68CQ4 756 aaKnown RBP11□□□□□ -0.65
CD40-205ENST00000477696 TMC4Q7Z404 712 aa11□□□□□ -0.65
CD40-205ENST00000477696 ZBTB38Q8NAP3 1195 aaPredicted RBP11□□□□□ -0.65
CD40-205ENST00000477696 FAM89AQ96GI7 184 aa11□□□□□ -0.65
CD40-205ENST00000477696 PSMD1Q99460 953 aa11□□□□□ -0.65
CD40-205ENST00000477696 MYD88Q99836 296 aa11□□□□□ -0.65
CD40-205ENST00000477696 RRAGCQ9HB90 399 aa11□□□□□ -0.65
CD40-205ENST00000477696 ZNF521Q96K83 1311 aa11□□□□□ -0.65
CD40-205ENST00000477696 PI4KAP2A4QPH2 592 aa10.99□□□□□ -0.65
CD40-205ENST00000477696 IRS4O14654 1257 aaPredicted RBP10.99□□□□□ -0.65
CD40-205ENST00000477696 TCERG1O14776 1098 aaKnown RBP10.99□□□□□ -0.65
CD40-205ENST00000477696 FLIIQ13045 1269 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms