RNA–Protein interactions for RNA: ENST00000477692.6

EXOSC1-209, Transcript of exosome component 1, humanhuman

TSL 5

Gene EXOSC1, Length 480 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-209ENST00000477692 CCDC191Q8NCU4 936 aa16.79■□□□□ 0.28
EXOSC1-209ENST00000477692 TNRC6CQ9HCJ0 1690 aaKnown RBP16.78■□□□□ 0.28
EXOSC1-209ENST00000477692 NEURL1BA8MQ27 555 aa16.78■□□□□ 0.28
EXOSC1-209ENST00000477692 NPHP1O15259 732 aa16.78■□□□□ 0.28
EXOSC1-209ENST00000477692 CWF19L2Q2TBE0 894 aaKnown RBP16.78■□□□□ 0.28
EXOSC1-209ENST00000477692 ERFEQ4G0M1 354 aa16.78■□□□□ 0.28
EXOSC1-209ENST00000477692 BEND3Q5T5X7 828 aa16.78■□□□□ 0.28
EXOSC1-209ENST00000477692 NUTM1Q86Y26 1132 aa16.78■□□□□ 0.28
EXOSC1-209ENST00000477692 LINS1Q8NG48 757 aa16.78■□□□□ 0.28
EXOSC1-209ENST00000477692 ARHGAP45Q92619 1136 aa16.78■□□□□ 0.28
EXOSC1-209ENST00000477692 BRIP1Q9BX63 1249 aa16.78■□□□□ 0.28
EXOSC1-209ENST00000477692 CWC25Q9NXE8 425 aaPredicted RBP16.78■□□□□ 0.28
EXOSC1-209ENST00000477692 DLEC1Q9Y238 1755 aa16.78■□□□□ 0.28
EXOSC1-209ENST00000477692 PXDNLA1KZ92 1463 aa16.78■□□□□ 0.28
EXOSC1-209ENST00000477692 RIC1Q4ADV7 1423 aa16.78■□□□□ 0.28
EXOSC1-209ENST00000477692 ABCC12Q96J65 1359 aa16.77■□□□□ 0.28
EXOSC1-209ENST00000477692 LAMB2P55268 1798 aa16.77■□□□□ 0.28
EXOSC1-209ENST00000477692 COL11A2P13942 1736 aaPredicted RBP16.77■□□□□ 0.28
EXOSC1-209ENST00000477692 DDX60Q8IY21 1712 aaKnown RBP16.77■□□□□ 0.28
EXOSC1-209ENST00000477692 GTF2E1P29083 439 aaPredicted RBP16.77■□□□□ 0.28
EXOSC1-209ENST00000477692 TGFB2P61812 414 aa16.77■□□□□ 0.28
EXOSC1-209ENST00000477692 NLGN2Q8NFZ4 835 aa16.77■□□□□ 0.28
EXOSC1-209ENST00000477692 API5Q9BZZ5 524 aaKnown RBP16.77■□□□□ 0.28
EXOSC1-209ENST00000477692 TRMT112Q9UI30 125 aaKnown RBP16.77■□□□□ 0.28
EXOSC1-209ENST00000477692 BRCA1P38398 1863 aaKnown RBP16.76■□□□□ 0.27
EXOSC1-209ENST00000477692 SLC10A5Q5PT55 438 aa16.76■□□□□ 0.27
EXOSC1-209ENST00000477692 RCAN3Q9UKA8 241 aa16.76■□□□□ 0.27
EXOSC1-209ENST00000477692 SH3TC1Q8TE82 1336 aa16.75■□□□□ 0.27
EXOSC1-209ENST00000477692 IPO8O15397 1037 aaKnown RBP16.75■□□□□ 0.27
EXOSC1-209ENST00000477692 PDE6BP35913 854 aa16.75■□□□□ 0.27
EXOSC1-209ENST00000477692 SLC4A10Q6U841 1118 aa16.75■□□□□ 0.27
EXOSC1-209ENST00000477692 SYNE4Q8N205 404 aa16.75■□□□□ 0.27
EXOSC1-209ENST00000477692 ZBTB38Q8NAP3 1195 aaPredicted RBP16.75■□□□□ 0.27
EXOSC1-209ENST00000477692 FAM89AQ96GI7 184 aa16.75■□□□□ 0.27
EXOSC1-209ENST00000477692 KLRG2A4D1S0 409 aaPredicted RBP16.74■□□□□ 0.27
EXOSC1-209ENST00000477692 ALDH1L1O75891 902 aa16.74■□□□□ 0.27
EXOSC1-209ENST00000477692 PCCAP05165 728 aaPredicted RBP16.74■□□□□ 0.27
EXOSC1-209ENST00000477692 GCKRQ14397 625 aa16.74■□□□□ 0.27
EXOSC1-209ENST00000477692 ATF7IPQ6VMQ6 1270 aa16.74■□□□□ 0.27
EXOSC1-209ENST00000477692 FRAT1Q92837 279 aaPredicted RBP16.74■□□□□ 0.27
EXOSC1-209ENST00000477692 SRCIN1Q9C0H9 1055 aa16.74■□□□□ 0.27
EXOSC1-209ENST00000477692 PDZRN3Q9UPQ7 1066 aa16.74■□□□□ 0.27
EXOSC1-209ENST00000477692 A0A0G2JLW4 131 aa16.73■□□□□ 0.27
EXOSC1-209ENST00000477692 TRIM27P14373 513 aa16.73■□□□□ 0.27
EXOSC1-209ENST00000477692 DPEP1P16444 411 aa16.73■□□□□ 0.27
EXOSC1-209ENST00000477692 CHRNA5P30532 468 aa16.73■□□□□ 0.27
EXOSC1-209ENST00000477692 ZKSCAN2Q63HK3 967 aa16.73■□□□□ 0.27
EXOSC1-209ENST00000477692 C2CD5Q86YS7 1000 aa16.73■□□□□ 0.27
EXOSC1-209ENST00000477692 H7C1W4 665 aa16.72■□□□□ 0.27
EXOSC1-209ENST00000477692 KCNA3P22001 575 aa16.72■□□□□ 0.27
EXOSC1-209ENST00000477692 ABCC4O15439 1325 aa16.71■□□□□ 0.27
EXOSC1-209ENST00000477692 CDHR2Q9BYE9 1310 aa16.71■□□□□ 0.27
EXOSC1-209ENST00000477692 H0YIN7 160 aa16.71■□□□□ 0.27
EXOSC1-209ENST00000477692 IRS4O14654 1257 aaPredicted RBP16.71■□□□□ 0.27
EXOSC1-209ENST00000477692 HCLS1P14317 486 aaPredicted RBP16.71■□□□□ 0.27
EXOSC1-209ENST00000477692 CCT4P50991 539 aaKnown RBP16.71■□□□□ 0.27
EXOSC1-209ENST00000477692 RTL5Q5HYW3 569 aaPredicted RBP16.71■□□□□ 0.27
EXOSC1-209ENST00000477692 C3orf67Q6ZVT6 689 aa16.71■□□□□ 0.27
EXOSC1-209ENST00000477692 JARID2Q92833 1246 aaPredicted RBP16.71■□□□□ 0.27
EXOSC1-209ENST00000477692 NLRP3Q96P20 1036 aa16.71■□□□□ 0.27
EXOSC1-209ENST00000477692 TNNQ9UQP3 1299 aa16.71■□□□□ 0.27
EXOSC1-209ENST00000477692 MYH3P11055 1940 aa16.7■□□□□ 0.26
EXOSC1-209ENST00000477692 SRGNP10124 158 aa16.7■□□□□ 0.26
EXOSC1-209ENST00000477692 CASP7P55210 303 aa16.7■□□□□ 0.26
EXOSC1-209ENST00000477692 CRY2Q49AN0 593 aa16.7■□□□□ 0.26
EXOSC1-209ENST00000477692 UBE3BQ7Z3V4 1068 aa16.7■□□□□ 0.26
EXOSC1-209ENST00000477692 CACNA1SQ13698 1873 aa16.69■□□□□ 0.26
EXOSC1-209ENST00000477692 GRM8O00222 908 aa16.69■□□□□ 0.26
EXOSC1-209ENST00000477692 HSP90B1P14625 803 aaKnown RBP16.69■□□□□ 0.26
EXOSC1-209ENST00000477692 INTS3Q68E01 1043 aaKnown RBP16.69■□□□□ 0.26
EXOSC1-209ENST00000477692 STYK1Q6J9G0 422 aa16.68■□□□□ 0.26
EXOSC1-209ENST00000477692 MASTLQ96GX5 879 aa16.68■□□□□ 0.26
EXOSC1-209ENST00000477692 C9orf78Q9NZ63 289 aaPredicted RBP16.68■□□□□ 0.26
EXOSC1-209ENST00000477692 PIM2Q9P1W9 311 aa16.68■□□□□ 0.26
EXOSC1-209ENST00000477692 ARFGEF1Q9Y6D6 1849 aa16.68■□□□□ 0.26
EXOSC1-209ENST00000477692 UTYO14607 1347 aa16.68■□□□□ 0.26
EXOSC1-209ENST00000477692 PDE8AO60658 829 aa16.67■□□□□ 0.26
EXOSC1-209ENST00000477692 NPR1P16066 1061 aa16.67■□□□□ 0.26
EXOSC1-209ENST00000477692 HOXA10P31260 410 aaPredicted RBP16.67■□□□□ 0.26
EXOSC1-209ENST00000477692 SF3B3Q15393 1217 aaKnown RBP16.67■□□□□ 0.26
EXOSC1-209ENST00000477692 ZNF622Q969S3 477 aaKnown RBP eCLIP16.67■□□□□ 0.26
EXOSC1-209ENST00000477692 CLUAP1Q96AJ1 413 aa16.67■□□□□ 0.26
EXOSC1-209ENST00000477692 PLA2G12BQ9BX93 195 aa16.67■□□□□ 0.26
EXOSC1-209ENST00000477692 NBPF7P0C2Y1 421 aaPredicted RBP16.66■□□□□ 0.26
EXOSC1-209ENST00000477692 DZIP1LQ8IYY4 767 aaKnown RBP16.66■□□□□ 0.26
EXOSC1-209ENST00000477692 RPGRQ92834 1020 aaKnown RBP16.66■□□□□ 0.26
EXOSC1-209ENST00000477692 USP44Q9H0E7 712 aa16.66■□□□□ 0.26
EXOSC1-209ENST00000477692 SLX4Q8IY92 1834 aa16.66■□□□□ 0.26
EXOSC1-209ENST00000477692 DALRD3Q5D0E6 543 aaKnown RBP16.65■□□□□ 0.26
EXOSC1-209ENST00000477692 TMEM57Q8N5G2 664 aa16.65■□□□□ 0.26
EXOSC1-209ENST00000477692 TTLL6Q8N841 843 aa16.65■□□□□ 0.26
EXOSC1-209ENST00000477692 CNKSR1Q969H4 720 aa16.65■□□□□ 0.26
EXOSC1-209ENST00000477692 RBM17Q96I25 401 aaKnown RBP16.65■□□□□ 0.26
EXOSC1-209ENST00000477692 WWC3Q9ULE0 1092 aa16.65■□□□□ 0.26
EXOSC1-209ENST00000477692 TAF1P21675 1872 aa16.65■□□□□ 0.26
EXOSC1-209ENST00000477692 PLIN1O60240 522 aa16.64■□□□□ 0.25
EXOSC1-209ENST00000477692 MS4A1P11836 297 aa16.64■□□□□ 0.25
EXOSC1-209ENST00000477692 RLBP1P12271 317 aa16.64■□□□□ 0.25
EXOSC1-209ENST00000477692 ALDH1B1P30837 517 aa16.64■□□□□ 0.25
EXOSC1-209ENST00000477692 FTSJ3Q8IY81 847 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms