RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 OPLAHO14841 1288 aa5.99□□□□□ -1.45
TARDBP-208ENST00000477447 VSIG8P0DPA2 414 aa5.99□□□□□ -1.45
TARDBP-208ENST00000477447 ARHGAP4P98171 946 aa5.99□□□□□ -1.45
TARDBP-208ENST00000477447 DNM1Q05193 864 aaKnown RBP5.99□□□□□ -1.45
TARDBP-208ENST00000477447 TNP2Q05952 138 aa5.99□□□□□ -1.45
TARDBP-208ENST00000477447 SFSWAPQ12872 951 aaKnown RBP5.99□□□□□ -1.45
TARDBP-208ENST00000477447 GPR161Q8N6U8 529 aaKnown RBP5.99□□□□□ -1.45
TARDBP-208ENST00000477447 EDEM1Q92611 657 aa5.99□□□□□ -1.45
TARDBP-208ENST00000477447 IRF7Q92985 503 aa5.99□□□□□ -1.45
TARDBP-208ENST00000477447 CFHR5Q9BXR6 569 aa5.99□□□□□ -1.45
TARDBP-208ENST00000477447 STRN4Q9NRL3 753 aa5.99□□□□□ -1.45
TARDBP-208ENST00000477447 FAM13BQ9NYF5 915 aa5.99□□□□□ -1.45
TARDBP-208ENST00000477447 NFX1Q12986 1120 aaKnown RBP5.98□□□□□ -1.45
TARDBP-208ENST00000477447 ECM1Q16610 540 aa5.98□□□□□ -1.45
TARDBP-208ENST00000477447 CMTR1Q8N1G2 835 aaKnown RBP5.98□□□□□ -1.45
TARDBP-208ENST00000477447 PIK3R5Q8WYR1 880 aa5.98□□□□□ -1.45
TARDBP-208ENST00000477447 CCDC87Q9NVE4 849 aa5.98□□□□□ -1.45
TARDBP-208ENST00000477447 MARK1Q9P0L2 795 aa5.98□□□□□ -1.45
TARDBP-208ENST00000477447 HCN2Q9UL51 889 aa5.98□□□□□ -1.45
TARDBP-208ENST00000477447 KCNH4Q9UQ05 1017 aa5.98□□□□□ -1.45
TARDBP-208ENST00000477447 RTCBQ9Y3I0 505 aaKnown RBP5.98□□□□□ -1.45
TARDBP-208ENST00000477447 NDUFB5O43674 189 aa5.97□□□□□ -1.45
TARDBP-208ENST00000477447 FZD6O60353 706 aa5.97□□□□□ -1.45
TARDBP-208ENST00000477447 PDGFAP04085 211 aa5.97□□□□□ -1.45
TARDBP-208ENST00000477447 PCSK2P16519 638 aa5.97□□□□□ -1.45
TARDBP-208ENST00000477447 MX2P20592 715 aa5.97□□□□□ -1.45
TARDBP-208ENST00000477447 GRNP28799 593 aaKnown RBP5.97□□□□□ -1.45
TARDBP-208ENST00000477447 LAMC2Q13753 1193 aa5.97□□□□□ -1.45
TARDBP-208ENST00000477447 GAS6Q14393 721 aa5.97□□□□□ -1.45
TARDBP-208ENST00000477447 GRIN2CQ14957 1233 aa5.97□□□□□ -1.45
TARDBP-208ENST00000477447 ZNF775Q96BV0 537 aaPredicted RBP5.97□□□□□ -1.45
TARDBP-208ENST00000477447 NUDT16Q96DE0 195 aaKnown RBP5.97□□□□□ -1.45
TARDBP-208ENST00000477447 COL25A1Q9BXS0 654 aaPredicted RBP5.97□□□□□ -1.45
TARDBP-208ENST00000477447 BRPF3Q9ULD4 1205 aa5.97□□□□□ -1.45
TARDBP-208ENST00000477447 POLIQ9UNA4 740 aa5.97□□□□□ -1.45
TARDBP-208ENST00000477447 WFS1O76024 890 aa5.96□□□□□ -1.46
TARDBP-208ENST00000477447 BMP4P12644 408 aa5.96□□□□□ -1.46
TARDBP-208ENST00000477447 MAPK1P28482 360 aa5.96□□□□□ -1.46
TARDBP-208ENST00000477447 MZF1P28698 734 aaPredicted RBP5.96□□□□□ -1.46
TARDBP-208ENST00000477447 KCNQ4P56696 695 aa5.96□□□□□ -1.46
TARDBP-208ENST00000477447 CTBSQ01459 385 aa5.96□□□□□ -1.46
TARDBP-208ENST00000477447 TRIP4Q15650 581 aaPredicted RBP5.96□□□□□ -1.46
TARDBP-208ENST00000477447 RNFT1Q5M7Z0 435 aa5.96□□□□□ -1.46
TARDBP-208ENST00000477447 RAB44Q7Z6P3 723 aaPredicted RBP5.96□□□□□ -1.46
TARDBP-208ENST00000477447 MBIPQ9NS73 344 aa5.96□□□□□ -1.46
TARDBP-208ENST00000477447 UBAP1LF5GYI3 381 aa5.95□□□□□ -1.46
TARDBP-208ENST00000477447 XYLBO75191 536 aa5.95□□□□□ -1.46
TARDBP-208ENST00000477447 SPEM2Q0P670 501 aa5.95□□□□□ -1.46
TARDBP-208ENST00000477447 C8orf34Q49A92 452 aa5.95□□□□□ -1.46
TARDBP-208ENST00000477447 TMCO4Q5TGY1 634 aa5.95□□□□□ -1.46
TARDBP-208ENST00000477447 KRT25Q7Z3Z0 450 aa5.95□□□□□ -1.46
TARDBP-208ENST00000477447 TTC16Q8NEE8 873 aa5.95□□□□□ -1.46
TARDBP-208ENST00000477447 SLC30A3Q99726 388 aa5.95□□□□□ -1.46
TARDBP-208ENST00000477447 DCTN4Q9UJW0 460 aa5.95□□□□□ -1.46
TARDBP-208ENST00000477447 KCNMB2Q9Y691 235 aa5.95□□□□□ -1.46
TARDBP-208ENST00000477447 A6NHS1 94 aa5.94□□□□□ -1.46
TARDBP-208ENST00000477447 MARSP56192 900 aaKnown RBP5.94□□□□□ -1.46
TARDBP-208ENST00000477447 CCDC27Q2M243 656 aa5.94□□□□□ -1.46
TARDBP-208ENST00000477447 FAM182BQ5T319 152 aa5.94□□□□□ -1.46
TARDBP-208ENST00000477447 LCE2CQ5TA81 110 aa5.94□□□□□ -1.46
TARDBP-208ENST00000477447 TMC1Q8TDI8 760 aa5.94□□□□□ -1.46
TARDBP-208ENST00000477447 BHMTQ93088 406 aa5.94□□□□□ -1.46
TARDBP-208ENST00000477447 CNTNAP3BQ96NU0 1288 aa5.94□□□□□ -1.46
TARDBP-208ENST00000477447 PNMA5Q96PV4 448 aa5.94□□□□□ -1.46
TARDBP-208ENST00000477447 CNTNAP3Q9BZ76 1288 aa5.94□□□□□ -1.46
TARDBP-208ENST00000477447 PRR12Q9ULL5 1215 aa5.94□□□□□ -1.46
TARDBP-208ENST00000477447 NSFL1CQ9UNZ2 370 aaKnown RBP5.94□□□□□ -1.46
TARDBP-208ENST00000477447 FNDC3AQ9Y2H6 1198 aaKnown RBP5.94□□□□□ -1.46
TARDBP-208ENST00000477447 C2CD2LO14523 706 aa5.93□□□□□ -1.46
TARDBP-208ENST00000477447 RPLP1P05386 114 aaKnown RBP5.93□□□□□ -1.46
TARDBP-208ENST00000477447 NFKB1P19838 968 aa5.93□□□□□ -1.46
TARDBP-208ENST00000477447 GMPRP36959 345 aa5.93□□□□□ -1.46
TARDBP-208ENST00000477447 USP5P45974 858 aa5.93□□□□□ -1.46
TARDBP-208ENST00000477447 KRT76Q01546 638 aa5.93□□□□□ -1.46
TARDBP-208ENST00000477447 CCINQ13939 588 aa5.93□□□□□ -1.46
TARDBP-208ENST00000477447 GJD3Q8N144 294 aa5.93□□□□□ -1.46
TARDBP-208ENST00000477447 GSX2Q9BZM3 304 aa5.93□□□□□ -1.46
TARDBP-208ENST00000477447 IGF1RP08069 1367 aa5.93□□□□□ -1.46
TARDBP-208ENST00000477447 SASH3O75995 380 aa5.92□□□□□ -1.46
TARDBP-208ENST00000477447 MAP2K3P46734 347 aa5.92□□□□□ -1.46
TARDBP-208ENST00000477447 NEUROD1Q13562 356 aa5.92□□□□□ -1.46
TARDBP-208ENST00000477447 TREML4Q6UXN2 200 aa5.92□□□□□ -1.46
TARDBP-208ENST00000477447 ZNF438Q7Z4V0 828 aa5.92□□□□□ -1.46
TARDBP-208ENST00000477447 GGNBP2Q9H3C7 697 aa5.92□□□□□ -1.46
TARDBP-208ENST00000477447 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.92□□□□□ -1.46
TARDBP-208ENST00000477447 EGFRP00533 1210 aa5.91□□□□□ -1.46
TARDBP-208ENST00000477447 RARAP10276 462 aa5.91□□□□□ -1.46
TARDBP-208ENST00000477447 PCBP4P57723 403 aaKnown RBP5.91□□□□□ -1.46
TARDBP-208ENST00000477447 EHHADHQ08426 723 aa5.91□□□□□ -1.46
TARDBP-208ENST00000477447 PDE3BQ13370 1112 aa5.91□□□□□ -1.46
TARDBP-208ENST00000477447 ZNF468Q5VIY5 522 aaPredicted RBP5.91□□□□□ -1.46
TARDBP-208ENST00000477447 TMC7Q7Z402 723 aa5.91□□□□□ -1.46
TARDBP-208ENST00000477447 FAM129BQ96TA1 746 aa5.91□□□□□ -1.46
TARDBP-208ENST00000477447 RBCK1Q9BYM8 510 aa5.91□□□□□ -1.46
TARDBP-208ENST00000477447 PODXL2Q9NZ53 605 aa5.91□□□□□ -1.46
TARDBP-208ENST00000477447 GPR182O15218 404 aa5.9□□□□□ -1.46
TARDBP-208ENST00000477447 ADAMTS2O95450 1211 aa5.9□□□□□ -1.46
TARDBP-208ENST00000477447 TARSP26639 723 aaKnown RBP5.9□□□□□ -1.46
TARDBP-208ENST00000477447 MFAP1P55081 439 aaKnown RBP5.9□□□□□ -1.46
TARDBP-208ENST00000477447 SRSF11Q05519 484 aaKnown RBP5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 141.2 ms