RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 FZD9O00144 591 aa13.19□□□□□ -0.3
COL4A5-204ENST00000477429 NPHP1O15259 732 aa13.19□□□□□ -0.3
COL4A5-204ENST00000477429 ATXN8OSP0DMR3 200 aa13.19□□□□□ -0.3
COL4A5-204ENST00000477429 NPR1P16066 1061 aa13.19□□□□□ -0.3
COL4A5-204ENST00000477429 DCTN1Q14203 1278 aa13.19□□□□□ -0.3
COL4A5-204ENST00000477429 MCM10Q7L590 875 aa13.19□□□□□ -0.3
COL4A5-204ENST00000477429 SYNE4Q8N205 404 aa13.19□□□□□ -0.3
COL4A5-204ENST00000477429 PRKAR2BP31323 418 aa13.18□□□□□ -0.3
COL4A5-204ENST00000477429 GAS2L2Q8NHY3 880 aa13.18□□□□□ -0.3
COL4A5-204ENST00000477429 RSPH6AQ9H0K4 717 aa13.18□□□□□ -0.3
COL4A5-204ENST00000477429 TRAF5O00463 557 aa13.17□□□□□ -0.3
COL4A5-204ENST00000477429 IARSP41252 1262 aaKnown RBP13.17□□□□□ -0.3
COL4A5-204ENST00000477429 DEFB115Q30KQ5 88 aa13.17□□□□□ -0.3
COL4A5-204ENST00000477429 SOGA3Q5TF21 947 aa13.17□□□□□ -0.3
COL4A5-204ENST00000477429 MPNDQ8N594 471 aa13.17□□□□□ -0.3
COL4A5-204ENST00000477429 NIP7Q9Y221 180 aaKnown RBP eCLIP13.17□□□□□ -0.3
COL4A5-204ENST00000477429 CLSPNQ9HAW4 1339 aa13.16□□□□□ -0.3
COL4A5-204ENST00000477429 EPS15P42566 896 aa13.16□□□□□ -0.3
COL4A5-204ENST00000477429 CST9Q5W186 159 aa13.16□□□□□ -0.3
COL4A5-204ENST00000477429 CLEC4GQ6UXB4 293 aa13.16□□□□□ -0.3
COL4A5-204ENST00000477429 C3orf67Q6ZVT6 689 aa13.16□□□□□ -0.3
COL4A5-204ENST00000477429 NUTM1Q86Y26 1132 aa13.16□□□□□ -0.3
COL4A5-204ENST00000477429 MIS18AQ9NYP9 233 aa13.16□□□□□ -0.3
COL4A5-204ENST00000477429 SCNN1DP51172 638 aa13.15□□□□□ -0.3
COL4A5-204ENST00000477429 CYP4F22Q6NT55 531 aa13.15□□□□□ -0.3
COL4A5-204ENST00000477429 DDX21Q9NR30 783 aaKnown RBP eCLIP13.15□□□□□ -0.3
COL4A5-204ENST00000477429 AOC2O75106 756 aa13.14□□□□□ -0.31
COL4A5-204ENST00000477429 MYCNP04198 464 aaPredicted RBP13.14□□□□□ -0.31
COL4A5-204ENST00000477429 SNRPA1P09661 255 aaKnown RBP13.14□□□□□ -0.31
COL4A5-204ENST00000477429 CRY2Q49AN0 593 aa13.14□□□□□ -0.31
COL4A5-204ENST00000477429 GPC2Q8N158 579 aa13.14□□□□□ -0.31
COL4A5-204ENST00000477429 ABT1Q9ULW3 272 aaKnown RBP13.14□□□□□ -0.31
COL4A5-204ENST00000477429 GJA3Q9Y6H8 435 aa13.14□□□□□ -0.31
COL4A5-204ENST00000477429 TPTE2Q6XPS3 522 aa13.13□□□□□ -0.31
COL4A5-204ENST00000477429 RTKN2Q8IZC4 609 aa13.13□□□□□ -0.31
COL4A5-204ENST00000477429 MKI67P46013 3256 aaKnown RBP13.13□□□□□ -0.31
COL4A5-204ENST00000477429 UBN2Q6ZU65 1347 aa13.13□□□□□ -0.31
COL4A5-204ENST00000477429 TCERG1O14776 1098 aaKnown RBP13.12□□□□□ -0.31
COL4A5-204ENST00000477429 GRM1Q13255 1194 aa13.12□□□□□ -0.31
COL4A5-204ENST00000477429 TTLL7Q6ZT98 887 aa13.12□□□□□ -0.31
COL4A5-204ENST00000477429 NGEFQ8N5V2 710 aa13.12□□□□□ -0.31
COL4A5-204ENST00000477429 CAPNS2Q96L46 248 aa13.12□□□□□ -0.31
COL4A5-204ENST00000477429 PSMD1Q99460 953 aa13.12□□□□□ -0.31
COL4A5-204ENST00000477429 DLK2Q6UY11 383 aa13.11□□□□□ -0.31
COL4A5-204ENST00000477429 NPM2Q86SE8 214 aaKnown RBP13.11□□□□□ -0.31
COL4A5-204ENST00000477429 PNMA8AQ86V59 439 aaPredicted RBP13.11□□□□□ -0.31
COL4A5-204ENST00000477429 BEGAINQ9BUH8 593 aa13.11□□□□□ -0.31
COL4A5-204ENST00000477429 TRIOBPQ9H2D6 2365 aa13.11□□□□□ -0.31
COL4A5-204ENST00000477429 NPC1L1Q9UHC9 1359 aa13.1□□□□□ -0.31
COL4A5-204ENST00000477429 GPTP24298 496 aa13.1□□□□□ -0.31
COL4A5-204ENST00000477429 SUSD4Q5VX71 490 aa13.1□□□□□ -0.31
COL4A5-204ENST00000477429 ZIC5Q96T25 663 aa13.1□□□□□ -0.31
COL4A5-204ENST00000477429 ZNF652Q9Y2D9 606 aa13.1□□□□□ -0.31
COL4A5-204ENST00000477429 SHTN1A0MZ66 631 aa13.09□□□□□ -0.31
COL4A5-204ENST00000477429 ALDH1B1P30837 517 aa13.09□□□□□ -0.31
COL4A5-204ENST00000477429 HOXA10P31260 410 aaPredicted RBP13.09□□□□□ -0.31
COL4A5-204ENST00000477429 GPR101Q96P66 508 aaPredicted RBP13.09□□□□□ -0.31
COL4A5-204ENST00000477429 AOC3Q16853 763 aa13.08□□□□□ -0.32
COL4A5-204ENST00000477429 PAXIP1Q6ZW49 1069 aaPredicted RBP13.08□□□□□ -0.32
COL4A5-204ENST00000477429 LARGE2Q8N3Y3 721 aa13.08□□□□□ -0.32
COL4A5-204ENST00000477429 JDP2Q8WYK2 163 aa13.08□□□□□ -0.32
COL4A5-204ENST00000477429 THUMPD2Q9BTF0 503 aaKnown RBP13.08□□□□□ -0.32
COL4A5-204ENST00000477429 GLIS2Q9BZE0 524 aaPredicted RBP13.08□□□□□ -0.32
COL4A5-204ENST00000477429 TLL2Q9Y6L7 1015 aa13.08□□□□□ -0.32
COL4A5-204ENST00000477429 RIC1Q4ADV7 1423 aa13.07□□□□□ -0.32
COL4A5-204ENST00000477429 RGL2O15211 777 aa13.07□□□□□ -0.32
COL4A5-204ENST00000477429 NTSR2O95665 410 aa13.07□□□□□ -0.32
COL4A5-204ENST00000477429 U2AF1L5P0DN76 240 aaPredicted RBP13.07□□□□□ -0.32
COL4A5-204ENST00000477429 HIRAP54198 1017 aaPredicted RBP13.07□□□□□ -0.32
COL4A5-204ENST00000477429 EIF6P56537 245 aaKnown RBP13.07□□□□□ -0.32
COL4A5-204ENST00000477429 U2AF1Q01081 240 aaKnown RBP eCLIP13.07□□□□□ -0.32
COL4A5-204ENST00000477429 ZBTB3Q9H5J0 574 aa13.07□□□□□ -0.32
COL4A5-204ENST00000477429 NUP98P52948 1817 aa13.06□□□□□ -0.32
COL4A5-204ENST00000477429 MYL6BP14649 208 aa13.06□□□□□ -0.32
COL4A5-204ENST00000477429 GTF2E1P29083 439 aaPredicted RBP13.06□□□□□ -0.32
COL4A5-204ENST00000477429 RRP7AQ9Y3A4 280 aaKnown RBP13.06□□□□□ -0.32
COL4A5-204ENST00000477429 MAP3K15Q6ZN16 1313 aa13.06□□□□□ -0.32
COL4A5-204ENST00000477429 LAMB4A4D0S4 1761 aa13.05□□□□□ -0.32
COL4A5-204ENST00000477429 PPEF1O14829 653 aaPredicted RBP13.05□□□□□ -0.32
COL4A5-204ENST00000477429 PPP2R1AP30153 589 aa13.05□□□□□ -0.32
COL4A5-204ENST00000477429 CXCL9Q07325 125 aa13.05□□□□□ -0.32
COL4A5-204ENST00000477429 TAF7Q15545 349 aaPredicted RBP13.05□□□□□ -0.32
COL4A5-204ENST00000477429 LRP10Q7Z4F1 713 aa13.05□□□□□ -0.32
COL4A5-204ENST00000477429 SAPCD2Q86UD0 394 aa13.05□□□□□ -0.32
COL4A5-204ENST00000477429 ZNF34Q8IZ26 560 aa13.05□□□□□ -0.32
COL4A5-204ENST00000477429 TRPM4Q8TD43 1214 aa13.05□□□□□ -0.32
COL4A5-204ENST00000477429 CRAMP1Q96RY5 1269 aa13.05□□□□□ -0.32
COL4A5-204ENST00000477429 GPRC5DQ9NZD1 345 aa13.05□□□□□ -0.32
COL4A5-204ENST00000477429 ERVV-1B6SEH8 477 aa13.04□□□□□ -0.32
COL4A5-204ENST00000477429 CELF2O95319 508 aaKnown RBP13.04□□□□□ -0.32
COL4A5-204ENST00000477429 LMOD1P29536 600 aaPredicted RBP13.04□□□□□ -0.32
COL4A5-204ENST00000477429 GMPSP49915 693 aaPredicted RBP13.04□□□□□ -0.32
COL4A5-204ENST00000477429 EIF4A1P60842 406 aaKnown RBP13.04□□□□□ -0.32
COL4A5-204ENST00000477429 USP50Q70EL3 339 aaPredicted RBP13.04□□□□□ -0.32
COL4A5-204ENST00000477429 CCER1Q8TC90 406 aaPredicted RBP13.04□□□□□ -0.32
COL4A5-204ENST00000477429 RTF1Q92541 710 aaKnown RBP13.04□□□□□ -0.32
COL4A5-204ENST00000477429 RPGRQ92834 1020 aaKnown RBP13.04□□□□□ -0.32
COL4A5-204ENST00000477429 ZNF428Q96B54 188 aa13.04□□□□□ -0.32
COL4A5-204ENST00000477429 KDM3BQ7LBC6 1761 aa13.04□□□□□ -0.32
COL4A5-204ENST00000477429 TRPM7Q96QT4 1865 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 121.2 ms