RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 GRIPAP1Q4V328 841 aa15.85■□□□□ 0.13
CLCNKA-205ENST00000477360 KSR2Q6VAB6 950 aa15.85■□□□□ 0.13
CLCNKA-205ENST00000477360 RIC3Q7Z5B4 369 aa15.85■□□□□ 0.13
CLCNKA-205ENST00000477360 TRMT2AQ8IZ69 625 aaKnown RBP15.85■□□□□ 0.13
CLCNKA-205ENST00000477360 CCDC191Q8NCU4 936 aa15.85■□□□□ 0.13
CLCNKA-205ENST00000477360 CHD4Q14839 1912 aa15.85■□□□□ 0.13
CLCNKA-205ENST00000477360 CACNA1FO60840 1977 aa15.84■□□□□ 0.13
CLCNKA-205ENST00000477360 SLC4A2P04920 1241 aa15.84■□□□□ 0.13
CLCNKA-205ENST00000477360 METTL22Q9BUU2 404 aaPredicted RBP15.84■□□□□ 0.13
CLCNKA-205ENST00000477360 PHAXQ9H814 394 aaKnown RBP15.84■□□□□ 0.13
CLCNKA-205ENST00000477360 SH3TC1Q8TE82 1336 aa15.84■□□□□ 0.13
CLCNKA-205ENST00000477360 ANKRD36CQ5JPF3 1778 aa15.84■□□□□ 0.13
CLCNKA-205ENST00000477360 GOLGB1Q14789 3259 aaKnown RBP15.84■□□□□ 0.13
CLCNKA-205ENST00000477360 ERFEQ4G0M1 354 aa15.83■□□□□ 0.12
CLCNKA-205ENST00000477360 CC2D2BQ6DHV5 1058 aa15.83■□□□□ 0.12
CLCNKA-205ENST00000477360 NLRP3Q96P20 1036 aa15.83■□□□□ 0.12
CLCNKA-205ENST00000477360 LTBP3Q9NS15 1303 aa15.83■□□□□ 0.12
CLCNKA-205ENST00000477360 ZC3H4Q9UPT8 1303 aaKnown RBP15.83■□□□□ 0.12
CLCNKA-205ENST00000477360 FLIIQ13045 1269 aa15.82■□□□□ 0.12
CLCNKA-205ENST00000477360 ZNF622Q969S3 477 aaKnown RBP eCLIP15.82■□□□□ 0.12
CLCNKA-205ENST00000477360 CRAMP1Q96RY5 1269 aa15.82■□□□□ 0.12
CLCNKA-205ENST00000477360 TRMT112Q9UI30 125 aaKnown RBP15.82■□□□□ 0.12
CLCNKA-205ENST00000477360 ABCC12Q96J65 1359 aa15.82■□□□□ 0.12
CLCNKA-205ENST00000477360 SENP3-EIF4A1A0A087X0R7 540 aa15.81■□□□□ 0.12
CLCNKA-205ENST00000477360 PI4KAP2A4QPH2 592 aa15.81■□□□□ 0.12
CLCNKA-205ENST00000477360 ADCY9O60503 1353 aa15.81■□□□□ 0.12
CLCNKA-205ENST00000477360 NEXNQ0ZGT2 675 aa15.81■□□□□ 0.12
CLCNKA-205ENST00000477360 PRPF40BQ6NWY9 871 aaKnown RBP15.81■□□□□ 0.12
CLCNKA-205ENST00000477360 NUTM1Q86Y26 1132 aa15.81■□□□□ 0.12
CLCNKA-205ENST00000477360 PI4KAP1Q8N8J0 262 aa15.81■□□□□ 0.12
CLCNKA-205ENST00000477360 ZBTB38Q8NAP3 1195 aaPredicted RBP15.81■□□□□ 0.12
CLCNKA-205ENST00000477360 ARHGAP27Q6ZUM4 889 aa15.8■□□□□ 0.12
CLCNKA-205ENST00000477360 C7orf43Q8WVR3 580 aa15.8■□□□□ 0.12
CLCNKA-205ENST00000477360 COL11A2P13942 1736 aaPredicted RBP15.8■□□□□ 0.12
CLCNKA-205ENST00000477360 FAM177BA6PVY3 158 aa15.79■□□□□ 0.12
CLCNKA-205ENST00000477360 TMC4Q7Z404 712 aa15.79■□□□□ 0.12
CLCNKA-205ENST00000477360 CCDC24Q8N4L8 307 aa15.79■□□□□ 0.12
CLCNKA-205ENST00000477360 RPGRQ92834 1020 aaKnown RBP15.79■□□□□ 0.12
CLCNKA-205ENST00000477360 RBM17Q96I25 401 aaKnown RBP15.79■□□□□ 0.12
CLCNKA-205ENST00000477360 CWC25Q9NXE8 425 aaPredicted RBP15.79■□□□□ 0.12
CLCNKA-205ENST00000477360 MAP3K2Q9Y2U5 619 aa15.79■□□□□ 0.12
CLCNKA-205ENST00000477360 ARFGEF2Q9Y6D5 1785 aa15.79■□□□□ 0.12
CLCNKA-205ENST00000477360 PCCAP05165 728 aaPredicted RBP15.78■□□□□ 0.12
CLCNKA-205ENST00000477360 SF3B3Q15393 1217 aaKnown RBP15.78■□□□□ 0.12
CLCNKA-205ENST00000477360 ALDH1L2Q3SY69 923 aa15.78■□□□□ 0.12
CLCNKA-205ENST00000477360 RTKN2Q8IZC4 609 aa15.78■□□□□ 0.12
CLCNKA-205ENST00000477360 CDHR2Q9BYE9 1310 aa15.77■□□□□ 0.12
CLCNKA-205ENST00000477360 BBOX1O75936 387 aa15.77■□□□□ 0.12
CLCNKA-205ENST00000477360 LMNB1P20700 586 aa15.77■□□□□ 0.12
CLCNKA-205ENST00000477360 BRPF1P55201 1214 aaPredicted RBP15.77■□□□□ 0.12
CLCNKA-205ENST00000477360 FKBP5Q13451 457 aaPredicted RBP15.77■□□□□ 0.12
CLCNKA-205ENST00000477360 G2E3Q7L622 706 aa15.77■□□□□ 0.12
CLCNKA-205ENST00000477360 LINS1Q8NG48 757 aa15.77■□□□□ 0.12
CLCNKA-205ENST00000477360 MYD88Q99836 296 aa15.77■□□□□ 0.12
CLCNKA-205ENST00000477360 PTPRCP08575 1304 aa15.76■□□□□ 0.11
CLCNKA-205ENST00000477360 ATP5J2-PTCD1G3V325 749 aa15.76■□□□□ 0.11
CLCNKA-205ENST00000477360 CCDC93Q567U6 631 aa15.76■□□□□ 0.11
CLCNKA-205ENST00000477360 DNAAF4Q8WXU2 420 aa15.76■□□□□ 0.11
CLCNKA-205ENST00000477360 NEURL1BA8MQ27 555 aa15.75■□□□□ 0.11
CLCNKA-205ENST00000477360 NFKBIEO00221 500 aa15.75■□□□□ 0.11
CLCNKA-205ENST00000477360 C21orf2O43822 256 aa15.75■□□□□ 0.11
CLCNKA-205ENST00000477360 IGKV5-2P06315 115 aa15.75■□□□□ 0.11
CLCNKA-205ENST00000477360 ZNF784Q8NCA9 323 aaPredicted RBP15.75■□□□□ 0.11
CLCNKA-205ENST00000477360 FAM89AQ96GI7 184 aa15.75■□□□□ 0.11
CLCNKA-205ENST00000477360 WWC3Q9ULE0 1092 aa15.75■□□□□ 0.11
CLCNKA-205ENST00000477360 TNRC6CQ9HCJ0 1690 aaKnown RBP15.75■□□□□ 0.11
CLCNKA-205ENST00000477360 IRS4O14654 1257 aaPredicted RBP15.74■□□□□ 0.11
CLCNKA-205ENST00000477360 DDX46Q7L014 1031 aaKnown RBP15.74■□□□□ 0.11
CLCNKA-205ENST00000477360 CDCA7LQ96GN5 454 aa15.74■□□□□ 0.11
CLCNKA-205ENST00000477360 PSMD1Q99460 953 aa15.74■□□□□ 0.11
CLCNKA-205ENST00000477360 TMX4Q9H1E5 349 aaPredicted RBP15.74■□□□□ 0.11
CLCNKA-205ENST00000477360 VPS33BQ9H267 617 aa15.74■□□□□ 0.11
CLCNKA-205ENST00000477360 TAOK3Q9H2K8 898 aa15.74■□□□□ 0.11
CLCNKA-205ENST00000477360 SNED1Q8TER0 1413 aa15.74■□□□□ 0.11
CLCNKA-205ENST00000477360 ZBED9Q6R2W3 1325 aa15.73■□□□□ 0.11
CLCNKA-205ENST00000477360 H7C1W4 665 aa15.73■□□□□ 0.11
CLCNKA-205ENST00000477360 TCERG1O14776 1098 aaKnown RBP15.73■□□□□ 0.11
CLCNKA-205ENST00000477360 PDE8AO60658 829 aa15.73■□□□□ 0.11
CLCNKA-205ENST00000477360 HCLS1P14317 486 aaPredicted RBP15.73■□□□□ 0.11
CLCNKA-205ENST00000477360 C9orf131Q5VYM1 1079 aa15.73■□□□□ 0.11
CLCNKA-205ENST00000477360 PLA2G12BQ9BX93 195 aa15.73■□□□□ 0.11
CLCNKA-205ENST00000477360 RTL9Q8NET4 1388 aa15.73■□□□□ 0.11
CLCNKA-205ENST00000477360 ALDH1L1O75891 902 aa15.72■□□□□ 0.11
CLCNKA-205ENST00000477360 FKBP4Q02790 459 aaKnown RBP eCLIP15.72■□□□□ 0.11
CLCNKA-205ENST00000477360 GRAPQ13588 217 aa15.72■□□□□ 0.11
CLCNKA-205ENST00000477360 GCKRQ14397 625 aa15.72■□□□□ 0.11
CLCNKA-205ENST00000477360 C3orf67Q6ZVT6 689 aa15.72■□□□□ 0.11
CLCNKA-205ENST00000477360 SP8Q8IXZ3 490 aa15.72■□□□□ 0.11
CLCNKA-205ENST00000477360 MRPL50Q8N5N7 158 aaKnown RBP15.72■□□□□ 0.11
CLCNKA-205ENST00000477360 GRAPLQ8TC17 118 aaPredicted RBP15.72■□□□□ 0.11
CLCNKA-205ENST00000477360 ATP6V0A2Q9Y487 856 aa15.72■□□□□ 0.11
CLCNKA-205ENST00000477360 SLX4Q8IY92 1834 aa15.72■□□□□ 0.11
CLCNKA-205ENST00000477360 FER1L6Q2WGJ9 1857 aa15.71■□□□□ 0.11
CLCNKA-205ENST00000477360 ABCC4O15439 1325 aa15.71■□□□□ 0.11
CLCNKA-205ENST00000477360 PPEF1O14829 653 aaPredicted RBP15.71■□□□□ 0.11
CLCNKA-205ENST00000477360 HNRNPUQ00839 825 aaKnown RBP eCLIP15.71■□□□□ 0.11
CLCNKA-205ENST00000477360 CCDC152Q4G0S7 254 aa15.71■□□□□ 0.11
CLCNKA-205ENST00000477360 BEND3Q5T5X7 828 aa15.71■□□□□ 0.11
CLCNKA-205ENST00000477360 SSH1Q8WYL5 1049 aa15.71■□□□□ 0.11
CLCNKA-205ENST00000477360 LAMB2P55268 1798 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms