RNA–Protein interactions for RNA: ENST00000476743.5

MSL3-213, Transcript of MSL complex subunit 3, humanhuman

TSL 4

Gene MSL3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-213ENST00000476743 C7orf43Q8WVR3 580 aa17.73■□□□□ 0.43
MSL3-213ENST00000476743 ISCA1Q9BUE6 129 aa17.73■□□□□ 0.43
MSL3-213ENST00000476743 UTP14AQ9BVJ6 771 aaKnown RBP17.73■□□□□ 0.43
MSL3-213ENST00000476743 CCDC88AQ3V6T2 1871 aa17.73■□□□□ 0.43
MSL3-213ENST00000476743 ZNF521Q96K83 1311 aa17.72■□□□□ 0.43
MSL3-213ENST00000476743 CACNA1FO60840 1977 aa17.72■□□□□ 0.43
MSL3-213ENST00000476743 LAMB2P55268 1798 aa17.72■□□□□ 0.43
MSL3-213ENST00000476743 CCER2I3L3R5 266 aa17.72■□□□□ 0.43
MSL3-213ENST00000476743 C21orf2O43822 256 aa17.72■□□□□ 0.43
MSL3-213ENST00000476743 HOXA10P31260 410 aaPredicted RBP17.72■□□□□ 0.43
MSL3-213ENST00000476743 PRELPP51888 382 aa17.72■□□□□ 0.43
MSL3-213ENST00000476743 PHAXQ9H814 394 aaKnown RBP17.72■□□□□ 0.43
MSL3-213ENST00000476743 SALL2Q9Y467 1007 aaPredicted RBP17.72■□□□□ 0.43
MSL3-213ENST00000476743 DICER1Q9UPY3 1922 aaKnown RBP17.72■□□□□ 0.43
MSL3-213ENST00000476743 LTBP3Q9NS15 1303 aa17.72■□□□□ 0.43
MSL3-213ENST00000476743 ALDH1B1P30837 517 aa17.71■□□□□ 0.43
MSL3-213ENST00000476743 RASSF7Q02833 373 aa17.71■□□□□ 0.43
MSL3-213ENST00000476743 TRIM28Q13263 835 aaKnown RBP17.71■□□□□ 0.43
MSL3-213ENST00000476743 TWISTNBQ3B726 338 aaPredicted RBP17.71■□□□□ 0.43
MSL3-213ENST00000476743 SOGA3Q5TF21 947 aa17.71■□□□□ 0.43
MSL3-213ENST00000476743 ZC3H4Q9UPT8 1303 aaKnown RBP17.71■□□□□ 0.42
MSL3-213ENST00000476743 TIAM2Q8IVF5 1701 aa17.7■□□□□ 0.42
MSL3-213ENST00000476743 LMNB1P20700 586 aa17.7■□□□□ 0.42
MSL3-213ENST00000476743 SPINK5Q9NQ38 1064 aaPredicted RBP17.7■□□□□ 0.42
MSL3-213ENST00000476743 RNF181Q9P0P0 153 aa17.7■□□□□ 0.42
MSL3-213ENST00000476743 SNED1Q8TER0 1413 aa17.7■□□□□ 0.42
MSL3-213ENST00000476743 DDX60Q8IY21 1712 aaKnown RBP17.69■□□□□ 0.42
MSL3-213ENST00000476743 GOLGA2Q08379 1002 aa17.69■□□□□ 0.42
MSL3-213ENST00000476743 GPBP1L1Q9HC44 474 aaPredicted RBP17.69■□□□□ 0.42
MSL3-213ENST00000476743 C3orf67Q6ZVT6 689 aa17.68■□□□□ 0.42
MSL3-213ENST00000476743 NLRP3Q96P20 1036 aa17.68■□□□□ 0.42
MSL3-213ENST00000476743 CRAMP1Q96RY5 1269 aa17.68■□□□□ 0.42
MSL3-213ENST00000476743 SH3TC1Q8TE82 1336 aa17.68■□□□□ 0.42
MSL3-213ENST00000476743 VAMP4O75379 141 aa17.67■□□□□ 0.42
MSL3-213ENST00000476743 MYH16Q9H6N6 1097 aa17.67■□□□□ 0.42
MSL3-213ENST00000476743 TRMT112Q9UI30 125 aaKnown RBP17.67■□□□□ 0.42
MSL3-213ENST00000476743 EXOSC9Q06265 439 aaKnown RBP17.66■□□□□ 0.42
MSL3-213ENST00000476743 CCDC93Q567U6 631 aa17.66■□□□□ 0.42
MSL3-213ENST00000476743 RIC3Q7Z5B4 369 aa17.66■□□□□ 0.42
MSL3-213ENST00000476743 SYNE4Q8N205 404 aa17.66■□□□□ 0.42
MSL3-213ENST00000476743 RPGRQ92834 1020 aaKnown RBP17.66■□□□□ 0.42
MSL3-213ENST00000476743 STK31Q9BXU1 1019 aa17.66■□□□□ 0.42
MSL3-213ENST00000476743 TAOK3Q9H2K8 898 aa17.66■□□□□ 0.42
MSL3-213ENST00000476743 ZNF219Q9P2Y4 722 aaPredicted RBP17.66■□□□□ 0.42
MSL3-213ENST00000476743 ATP5J2-PTCD1G3V325 749 aa17.65■□□□□ 0.42
MSL3-213ENST00000476743 DDX58O95786 925 aaKnown RBP17.65■□□□□ 0.42
MSL3-213ENST00000476743 ZNF526Q8TF50 670 aaPredicted RBP17.65■□□□□ 0.42
MSL3-213ENST00000476743 RBM17Q96I25 401 aaKnown RBP17.65■□□□□ 0.42
MSL3-213ENST00000476743 METTL22Q9BUU2 404 aaPredicted RBP17.65■□□□□ 0.42
MSL3-213ENST00000476743 CC2D2BQ6DHV5 1058 aa17.64■□□□□ 0.41
MSL3-213ENST00000476743 KSR2Q6VAB6 950 aa17.64■□□□□ 0.41
MSL3-213ENST00000476743 RTKN2Q8IZC4 609 aa17.64■□□□□ 0.41
MSL3-213ENST00000476743 KIF3CO14782 793 aa17.63■□□□□ 0.41
MSL3-213ENST00000476743 SLC4A2P04920 1241 aa17.63■□□□□ 0.41
MSL3-213ENST00000476743 HCLS1P14317 486 aaPredicted RBP17.63■□□□□ 0.41
MSL3-213ENST00000476743 C1QTNF8P60827 252 aa17.63■□□□□ 0.41
MSL3-213ENST00000476743 FKBP4Q02790 459 aaKnown RBP eCLIP17.63■□□□□ 0.41
MSL3-213ENST00000476743 CCDC191Q8NCU4 936 aa17.63■□□□□ 0.41
MSL3-213ENST00000476743 PI4KAP2A4QPH2 592 aa17.62■□□□□ 0.41
MSL3-213ENST00000476743 TCERG1O14776 1098 aaKnown RBP17.62■□□□□ 0.41
MSL3-213ENST00000476743 GRIPAP1Q4V328 841 aa17.62■□□□□ 0.41
MSL3-213ENST00000476743 OLFM4Q6UX06 510 aa17.62■□□□□ 0.41
MSL3-213ENST00000476743 G2E3Q7L622 706 aa17.62■□□□□ 0.41
MSL3-213ENST00000476743 PI4KAP1Q8N8J0 262 aa17.62■□□□□ 0.41
MSL3-213ENST00000476743 ZBTB38Q8NAP3 1195 aaPredicted RBP17.62■□□□□ 0.41
MSL3-213ENST00000476743 FAM89AQ96GI7 184 aa17.62■□□□□ 0.41
MSL3-213ENST00000476743 MYD88Q99836 296 aa17.62■□□□□ 0.41
MSL3-213ENST00000476743 MAP3K2Q9Y2U5 619 aa17.62■□□□□ 0.41
MSL3-213ENST00000476743 ABCC4O15439 1325 aa17.62■□□□□ 0.41
MSL3-213ENST00000476743 SF3B3Q15393 1217 aaKnown RBP17.61■□□□□ 0.41
MSL3-213ENST00000476743 PSMD1Q99460 953 aa17.61■□□□□ 0.41
MSL3-213ENST00000476743 KDM2BQ8NHM5 1336 aa17.61■□□□□ 0.41
MSL3-213ENST00000476743 GLTPD2A6NH11 291 aa17.6■□□□□ 0.41
MSL3-213ENST00000476743 PPEF1O14829 653 aaPredicted RBP17.6■□□□□ 0.41
MSL3-213ENST00000476743 PCCAP05165 728 aaPredicted RBP17.6■□□□□ 0.41
MSL3-213ENST00000476743 IGKV5-2P06315 115 aa17.6■□□□□ 0.41
MSL3-213ENST00000476743 FLIIQ13045 1269 aa17.6■□□□□ 0.41
MSL3-213ENST00000476743 LRRC37AA6NMS7 1700 aa17.6■□□□□ 0.41
MSL3-213ENST00000476743 TAF1P21675 1872 aa17.6■□□□□ 0.41
MSL3-213ENST00000476743 WDR90Q96KV7 1748 aa17.59■□□□□ 0.41
MSL3-213ENST00000476743 E9PSI1 815 aa17.59■□□□□ 0.41
MSL3-213ENST00000476743 IRS4O14654 1257 aaPredicted RBP17.59■□□□□ 0.41
MSL3-213ENST00000476743 BBOX1O75936 387 aa17.59■□□□□ 0.41
MSL3-213ENST00000476743 NMRK2Q9NPI5 230 aa17.59■□□□□ 0.41
MSL3-213ENST00000476743 CWC25Q9NXE8 425 aaPredicted RBP17.59■□□□□ 0.41
MSL3-213ENST00000476743 ATP6V0A2Q9Y487 856 aa17.59■□□□□ 0.41
MSL3-213ENST00000476743 GRAPQ13588 217 aa17.58■□□□□ 0.4
MSL3-213ENST00000476743 DIEXFQ68CQ4 756 aaKnown RBP17.58■□□□□ 0.4
MSL3-213ENST00000476743 DDX46Q7L014 1031 aaKnown RBP17.58■□□□□ 0.4
MSL3-213ENST00000476743 GRAPLQ8TC17 118 aaPredicted RBP17.58■□□□□ 0.4
MSL3-213ENST00000476743 ZNF428Q96B54 188 aa17.58■□□□□ 0.4
MSL3-213ENST00000476743 CDHR2Q9BYE9 1310 aa17.57■□□□□ 0.4
MSL3-213ENST00000476743 HSP90B1P14625 803 aaKnown RBP17.57■□□□□ 0.4
MSL3-213ENST00000476743 SLFN5Q08AF3 891 aa17.57■□□□□ 0.4
MSL3-213ENST00000476743 SLC51AQ86UW1 340 aa17.57■□□□□ 0.4
MSL3-213ENST00000476743 ZNF277Q9NRM2 450 aaPredicted RBP17.57■□□□□ 0.4
MSL3-213ENST00000476743 COL4A1P02462 1669 aa17.57■□□□□ 0.4
MSL3-213ENST00000476743 NEURL1BA8MQ27 555 aa17.56■□□□□ 0.4
MSL3-213ENST00000476743 NEXNQ0ZGT2 675 aa17.56■□□□□ 0.4
MSL3-213ENST00000476743 TMC4Q7Z404 712 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms