RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 NTSR2O95665 410 aa13.16□□□□□ -0.3
CCM2-208ENST00000476594 C1QTNF8P60827 252 aa13.16□□□□□ -0.3
CCM2-208ENST00000476594 TCIRG1Q13488 830 aa13.16□□□□□ -0.3
CCM2-208ENST00000476594 ERFEQ4G0M1 354 aa13.16□□□□□ -0.3
CCM2-208ENST00000476594 GRIPAP1Q4V328 841 aa13.16□□□□□ -0.3
CCM2-208ENST00000476594 SUSD4Q5VX71 490 aa13.16□□□□□ -0.3
CCM2-208ENST00000476594 PPP4R3CPQ6ZMV5 832 aa13.16□□□□□ -0.3
CCM2-208ENST00000476594 NUTM1Q86Y26 1132 aa13.16□□□□□ -0.3
CCM2-208ENST00000476594 WDR63Q8IWG1 891 aa13.16□□□□□ -0.3
CCM2-208ENST00000476594 RBM17Q96I25 401 aaKnown RBP13.16□□□□□ -0.3
CCM2-208ENST00000476594 ZNF219Q9P2Y4 722 aaPredicted RBP13.16□□□□□ -0.3
CCM2-208ENST00000476594 ARFGEF2Q9Y6D5 1785 aa13.15□□□□□ -0.3
CCM2-208ENST00000476594 ELL2O00472 640 aaPredicted RBP13.15□□□□□ -0.3
CCM2-208ENST00000476594 RASSF7Q02833 373 aa13.15□□□□□ -0.3
CCM2-208ENST00000476594 CRY2Q49AN0 593 aa13.15□□□□□ -0.3
CCM2-208ENST00000476594 CC2D2BQ6DHV5 1058 aa13.15□□□□□ -0.3
CCM2-208ENST00000476594 RIC3Q7Z5B4 369 aa13.15□□□□□ -0.3
CCM2-208ENST00000476594 C16orf71Q8IYS4 520 aaPredicted RBP13.15□□□□□ -0.3
CCM2-208ENST00000476594 RTKN2Q8IZC4 609 aa13.15□□□□□ -0.3
CCM2-208ENST00000476594 TRMT112Q9UI30 125 aaKnown RBP13.15□□□□□ -0.3
CCM2-208ENST00000476594 SH3TC1Q8TE82 1336 aa13.14□□□□□ -0.31
CCM2-208ENST00000476594 DPY19L2Q6NUT2 758 aa13.14□□□□□ -0.31
CCM2-208ENST00000476594 ABCC12Q96J65 1359 aa13.14□□□□□ -0.31
CCM2-208ENST00000476594 ANKRD36CQ5JPF3 1778 aa13.14□□□□□ -0.31
CCM2-208ENST00000476594 NFKBIEO00221 500 aa13.13□□□□□ -0.31
CCM2-208ENST00000476594 TWISTNBQ3B726 338 aaPredicted RBP13.13□□□□□ -0.31
CCM2-208ENST00000476594 NLRP10Q86W26 655 aa13.13□□□□□ -0.31
CCM2-208ENST00000476594 CRAMP1Q96RY5 1269 aa13.13□□□□□ -0.31
CCM2-208ENST00000476594 MYH16Q9H6N6 1097 aa13.13□□□□□ -0.31
CCM2-208ENST00000476594 HOXA10P31260 410 aaPredicted RBP13.12□□□□□ -0.31
CCM2-208ENST00000476594 FKBP4Q02790 459 aaKnown RBP eCLIP13.12□□□□□ -0.31
CCM2-208ENST00000476594 SLC10A5Q5PT55 438 aa13.12□□□□□ -0.31
CCM2-208ENST00000476594 C8orf58Q8NAV2 365 aa13.12□□□□□ -0.31
CCM2-208ENST00000476594 TSR2Q969E8 191 aaKnown RBP13.12□□□□□ -0.31
CCM2-208ENST00000476594 SALL2Q9Y467 1007 aaPredicted RBP13.12□□□□□ -0.31
CCM2-208ENST00000476594 CACNA1SQ13698 1873 aa13.12□□□□□ -0.31
CCM2-208ENST00000476594 SBF1O95248 1867 aa13.11□□□□□ -0.31
CCM2-208ENST00000476594 NEXNQ0ZGT2 675 aa13.11□□□□□ -0.31
CCM2-208ENST00000476594 DDX46Q7L014 1031 aaKnown RBP13.11□□□□□ -0.31
CCM2-208ENST00000476594 SLX4Q8IY92 1834 aa13.11□□□□□ -0.31
CCM2-208ENST00000476594 FER1L6Q2WGJ9 1857 aa13.1□□□□□ -0.31
CCM2-208ENST00000476594 GLTPD2A6NH11 291 aa13.1□□□□□ -0.31
CCM2-208ENST00000476594 PPEF1O14829 653 aaPredicted RBP13.1□□□□□ -0.31
CCM2-208ENST00000476594 TOMM70O94826 608 aa13.1□□□□□ -0.31
CCM2-208ENST00000476594 TRIM28Q13263 835 aaKnown RBP13.1□□□□□ -0.31
CCM2-208ENST00000476594 TMC4Q7Z404 712 aa13.1□□□□□ -0.31
CCM2-208ENST00000476594 ISCA1Q9BUE6 129 aa13.1□□□□□ -0.31
CCM2-208ENST00000476594 FANCIQ9NVI1 1328 aa13.1□□□□□ -0.31
CCM2-208ENST00000476594 TNRC6CQ9HCJ0 1690 aaKnown RBP13.09□□□□□ -0.31
CCM2-208ENST00000476594 SENP3-EIF4A1A0A087X0R7 540 aa13.09□□□□□ -0.31
CCM2-208ENST00000476594 TIAM2Q8IVF5 1701 aa13.09□□□□□ -0.31
CCM2-208ENST00000476594 CCDC191Q8NCU4 936 aa13.09□□□□□ -0.31
CCM2-208ENST00000476594 C7orf43Q8WVR3 580 aa13.09□□□□□ -0.31
CCM2-208ENST00000476594 PSMD1Q99460 953 aa13.09□□□□□ -0.31
CCM2-208ENST00000476594 PHAXQ9H814 394 aaKnown RBP13.09□□□□□ -0.31
CCM2-208ENST00000476594 ATP5J2-PTCD1G3V325 749 aa13.08□□□□□ -0.32
CCM2-208ENST00000476594 CCER2I3L3R5 266 aa13.08□□□□□ -0.32
CCM2-208ENST00000476594 KIF3CO14782 793 aa13.08□□□□□ -0.32
CCM2-208ENST00000476594 BBOX1O75936 387 aa13.08□□□□□ -0.32
CCM2-208ENST00000476594 TSPYL6Q8N831 410 aa13.08□□□□□ -0.32
CCM2-208ENST00000476594 SUPT20HQ8NEM7 779 aa13.08□□□□□ -0.32
CCM2-208ENST00000476594 JDP2Q8WYK2 163 aa13.08□□□□□ -0.32
CCM2-208ENST00000476594 MYD88Q99836 296 aa13.08□□□□□ -0.32
CCM2-208ENST00000476594 SLC4A2P04920 1241 aa13.07□□□□□ -0.32
CCM2-208ENST00000476594 HCLS1P14317 486 aaPredicted RBP13.07□□□□□ -0.32
CCM2-208ENST00000476594 VEGFAP15692 232 aaPredicted RBP13.07□□□□□ -0.32
CCM2-208ENST00000476594 KSR2Q6VAB6 950 aa13.07□□□□□ -0.32
CCM2-208ENST00000476594 ZBTB38Q8NAP3 1195 aaPredicted RBP13.07□□□□□ -0.32
CCM2-208ENST00000476594 RBM46Q8TBY0 533 aaKnown RBP13.07□□□□□ -0.32
CCM2-208ENST00000476594 METTL22Q9BUU2 404 aaPredicted RBP13.07□□□□□ -0.32
CCM2-208ENST00000476594 NMRK2Q9NPI5 230 aa13.07□□□□□ -0.32
CCM2-208ENST00000476594 CWC25Q9NXE8 425 aaPredicted RBP13.07□□□□□ -0.32
CCM2-208ENST00000476594 DICER1Q9UPY3 1922 aaKnown RBP13.07□□□□□ -0.32
CCM2-208ENST00000476594 CCDC88AQ3V6T2 1871 aa13.06□□□□□ -0.32
CCM2-208ENST00000476594 IRS4O14654 1257 aaPredicted RBP13.06□□□□□ -0.32
CCM2-208ENST00000476594 IARSP41252 1262 aaKnown RBP13.06□□□□□ -0.32
CCM2-208ENST00000476594 GRAPQ13588 217 aa13.06□□□□□ -0.32
CCM2-208ENST00000476594 SYNE4Q8N205 404 aa13.06□□□□□ -0.32
CCM2-208ENST00000476594 GRAPLQ8TC17 118 aaPredicted RBP13.06□□□□□ -0.32
CCM2-208ENST00000476594 FAM89AQ96GI7 184 aa13.06□□□□□ -0.32
CCM2-208ENST00000476594 VPS33BQ9H267 617 aa13.06□□□□□ -0.32
CCM2-208ENST00000476594 RRAGCQ9HB90 399 aa13.06□□□□□ -0.32
CCM2-208ENST00000476594 MAP3K2Q9Y2U5 619 aa13.06□□□□□ -0.32
CCM2-208ENST00000476594 ABCC4O15439 1325 aa13.06□□□□□ -0.32
CCM2-208ENST00000476594 PI4KAP2A4QPH2 592 aa13.05□□□□□ -0.32
CCM2-208ENST00000476594 IQCA1LA6NCM1 817 aa13.05□□□□□ -0.32
CCM2-208ENST00000476594 PCCAP05165 728 aaPredicted RBP13.05□□□□□ -0.32
CCM2-208ENST00000476594 EXOSC9Q06265 439 aaKnown RBP13.05□□□□□ -0.32
CCM2-208ENST00000476594 FSTL1Q12841 308 aa13.05□□□□□ -0.32
CCM2-208ENST00000476594 FKBP5Q13451 457 aaPredicted RBP13.05□□□□□ -0.32
CCM2-208ENST00000476594 SF3B3Q15393 1217 aaKnown RBP13.05□□□□□ -0.32
CCM2-208ENST00000476594 PI4KAP1Q8N8J0 262 aa13.05□□□□□ -0.32
CCM2-208ENST00000476594 ZNF277Q9NRM2 450 aaPredicted RBP13.05□□□□□ -0.32
CCM2-208ENST00000476594 ATP6V0A2Q9Y487 856 aa13.05□□□□□ -0.32
CCM2-208ENST00000476594 CACNA1FO60840 1977 aa13.04□□□□□ -0.32
CCM2-208ENST00000476594 TCERG1O14776 1098 aaKnown RBP13.04□□□□□ -0.32
CCM2-208ENST00000476594 PRELPP51888 382 aa13.04□□□□□ -0.32
CCM2-208ENST00000476594 EIF6P56537 245 aaKnown RBP13.04□□□□□ -0.32
CCM2-208ENST00000476594 FLIIQ13045 1269 aa13.04□□□□□ -0.32
CCM2-208ENST00000476594 CCDC152Q4G0S7 254 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms