RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 BCS1LQ9Y276 419 aa9.21□□□□□ -0.94
PTCD3-211ENST00000476215 CNTNAP5Q8WYK1 1306 aa9.21□□□□□ -0.94
PTCD3-211ENST00000476215 ADARB2-AS1A8MUL3 147 aa9.2□□□□□ -0.94
PTCD3-211ENST00000476215 LGR5O75473 907 aa9.2□□□□□ -0.94
PTCD3-211ENST00000476215 GDF11O95390 407 aa9.2□□□□□ -0.94
PTCD3-211ENST00000476215 SNRPNP63162 240 aaKnown RBP9.2□□□□□ -0.94
PTCD3-211ENST00000476215 LINC00114Q6XXX2 140 aa9.2□□□□□ -0.94
PTCD3-211ENST00000476215 PODNQ7Z5L7 613 aa9.2□□□□□ -0.94
PTCD3-211ENST00000476215 SLC30A3Q99726 388 aa9.2□□□□□ -0.94
PTCD3-211ENST00000476215 EFCC1Q9HA90 598 aa9.2□□□□□ -0.94
PTCD3-211ENST00000476215 DGKGP49619 791 aa9.19□□□□□ -0.94
PTCD3-211ENST00000476215 GRIN2CQ14957 1233 aa9.19□□□□□ -0.94
PTCD3-211ENST00000476215 TNFRSF25Q93038 417 aa9.19□□□□□ -0.94
PTCD3-211ENST00000476215 COL26A1Q96A83 441 aa9.19□□□□□ -0.94
PTCD3-211ENST00000476215 CEP63Q96MT8 703 aa9.19□□□□□ -0.94
PTCD3-211ENST00000476215 TRAIPQ9BWF2 469 aa9.19□□□□□ -0.94
PTCD3-211ENST00000476215 KCNH4Q9UQ05 1017 aa9.19□□□□□ -0.94
PTCD3-211ENST00000476215 NGLY1Q96IV0 654 aa9.18□□□□□ -0.94
PTCD3-211ENST00000476215 MKL2Q9ULH7 1088 aa9.18□□□□□ -0.94
PTCD3-211ENST00000476215 PRR12Q9ULL5 1215 aa9.18□□□□□ -0.94
PTCD3-211ENST00000476215 PRMT3O60678 531 aa9.17□□□□□ -0.94
PTCD3-211ENST00000476215 PCBP4P57723 403 aaKnown RBP9.17□□□□□ -0.94
PTCD3-211ENST00000476215 SPEM2Q0P670 501 aa9.17□□□□□ -0.94
PTCD3-211ENST00000476215 FKBP5Q13451 457 aaPredicted RBP9.17□□□□□ -0.94
PTCD3-211ENST00000476215 CHSY3Q70JA7 882 aa9.17□□□□□ -0.94
PTCD3-211ENST00000476215 SYT9Q86SS6 491 aa9.17□□□□□ -0.94
PTCD3-211ENST00000476215 ALYREFQ86V81 257 aaKnown RBP9.17□□□□□ -0.94
PTCD3-211ENST00000476215 CLP1Q92989 425 aaKnown RBP9.17□□□□□ -0.94
PTCD3-211ENST00000476215 C11orf16Q9NQ32 467 aa9.17□□□□□ -0.94
PTCD3-211ENST00000476215 ELOA3CA0A087WX78 387 aaPredicted RBP9.16□□□□□ -0.94
PTCD3-211ENST00000476215 ELOA3DA6NLF2 546 aaPredicted RBP9.16□□□□□ -0.94
PTCD3-211ENST00000476215 ELOA3BQ3SY89 546 aa9.16□□□□□ -0.94
PTCD3-211ENST00000476215 ELOA3Q8NG57 546 aa9.16□□□□□ -0.94
PTCD3-211ENST00000476215 PRIMPOLQ96LW4 560 aa9.16□□□□□ -0.94
PTCD3-211ENST00000476215 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.16□□□□□ -0.94
PTCD3-211ENST00000476215 ATP2B4P23634 1241 aa9.15□□□□□ -0.94
PTCD3-211ENST00000476215 GRNP28799 593 aaKnown RBP9.15□□□□□ -0.94
PTCD3-211ENST00000476215 INPP5BP32019 993 aa9.15□□□□□ -0.94
PTCD3-211ENST00000476215 CXXC1Q9P0U4 656 aaPredicted RBP9.15□□□□□ -0.94
PTCD3-211ENST00000476215 SLAIN2Q9P270 581 aa9.15□□□□□ -0.94
PTCD3-211ENST00000476215 C11orf91Q3C1V1 193 aa9.14□□□□□ -0.95
PTCD3-211ENST00000476215 DCAF5Q96JK2 942 aa9.14□□□□□ -0.95
PTCD3-211ENST00000476215 LRFN2Q9ULH4 789 aa9.14□□□□□ -0.95
PTCD3-211ENST00000476215 PIK3R2O00459 728 aa9.13□□□□□ -0.95
PTCD3-211ENST00000476215 DGKZQ13574 1117 aa9.13□□□□□ -0.95
PTCD3-211ENST00000476215 KCTD17Q8N5Z5 321 aa9.13□□□□□ -0.95
PTCD3-211ENST00000476215 VTI1AQ96AJ9 217 aa9.13□□□□□ -0.95
PTCD3-211ENST00000476215 GSX2Q9BZM3 304 aa9.13□□□□□ -0.95
PTCD3-211ENST00000476215 PRDM6Q9NQX0 595 aa9.13□□□□□ -0.95
PTCD3-211ENST00000476215 KLK14Q9P0G3 267 aa9.13□□□□□ -0.95
PTCD3-211ENST00000476215 GNB5O14775 395 aa9.12□□□□□ -0.95
PTCD3-211ENST00000476215 NEUROD1Q13562 356 aa9.12□□□□□ -0.95
PTCD3-211ENST00000476215 B4GALNT3Q6L9W6 998 aa9.12□□□□□ -0.95
PTCD3-211ENST00000476215 BRD1O95696 1058 aa9.11□□□□□ -0.95
PTCD3-211ENST00000476215 ITGB2P05107 769 aa9.11□□□□□ -0.95
PTCD3-211ENST00000476215 AMPD1P23109 780 aa9.11□□□□□ -0.95
PTCD3-211ENST00000476215 COL8A1P27658 744 aa9.11□□□□□ -0.95
PTCD3-211ENST00000476215 SSFA2P28290 1259 aa9.11□□□□□ -0.95
PTCD3-211ENST00000476215 IDH3AP50213 366 aa9.11□□□□□ -0.95
PTCD3-211ENST00000476215 COX20Q5RI15 118 aa9.11□□□□□ -0.95
PTCD3-211ENST00000476215 MICAL2O94851 1124 aa9.1□□□□□ -0.95
PTCD3-211ENST00000476215 IGHA1P01876 353 aa9.1□□□□□ -0.95
PTCD3-211ENST00000476215 EPB42P16452 691 aa9.1□□□□□ -0.95
PTCD3-211ENST00000476215 ARSDP51689 593 aa9.1□□□□□ -0.95
PTCD3-211ENST00000476215 AEBP1Q8IUX7 1158 aa9.1□□□□□ -0.95
PTCD3-211ENST00000476215 RRAGCQ9HB90 399 aa9.1□□□□□ -0.95
PTCD3-211ENST00000476215 STARD13Q9Y3M8 1113 aa9.1□□□□□ -0.95
PTCD3-211ENST00000476215 PHLDB3Q6NSJ2 640 aa9.09□□□□□ -0.95
PTCD3-211ENST00000476215 OPLAHO14841 1288 aa9.08□□□□□ -0.96
PTCD3-211ENST00000476215 PTCD1O75127 700 aaKnown RBP9.08□□□□□ -0.96
PTCD3-211ENST00000476215 MAP3K6O95382 1288 aa9.08□□□□□ -0.96
PTCD3-211ENST00000476215 EGFRP00533 1210 aa9.08□□□□□ -0.96
PTCD3-211ENST00000476215 ALAS2P22557 587 aa9.08□□□□□ -0.96
PTCD3-211ENST00000476215 ADH7P40394 386 aa9.08□□□□□ -0.96
PTCD3-211ENST00000476215 CCINQ13939 588 aa9.08□□□□□ -0.96
PTCD3-211ENST00000476215 COL9A3Q14050 684 aaPredicted RBP9.08□□□□□ -0.96
PTCD3-211ENST00000476215 C20orf204Q6ZNR8 217 aa9.08□□□□□ -0.96
PTCD3-211ENST00000476215 IFT43Q96FT9 208 aa9.08□□□□□ -0.96
PTCD3-211ENST00000476215 TNFRSF10BO14763 440 aa9.07□□□□□ -0.96
PTCD3-211ENST00000476215 C16orf46Q6P387 395 aa9.07□□□□□ -0.96
PTCD3-211ENST00000476215 RAB44Q7Z6P3 723 aaPredicted RBP9.07□□□□□ -0.96
PTCD3-211ENST00000476215 TRIM11Q96F44 468 aa9.07□□□□□ -0.96
PTCD3-211ENST00000476215 MKNK1Q9BUB5 465 aa9.07□□□□□ -0.96
PTCD3-211ENST00000476215 SUV39H2Q9H5I1 410 aa9.07□□□□□ -0.96
PTCD3-211ENST00000476215 NOP53Q9NZM5 478 aaKnown RBP9.07□□□□□ -0.96
PTCD3-211ENST00000476215 SCNN1AP37088 669 aa9.06□□□□□ -0.96
PTCD3-211ENST00000476215 PLA2G4EQ3MJ16 856 aa9.06□□□□□ -0.96
PTCD3-211ENST00000476215 BHMTQ93088 406 aa9.06□□□□□ -0.96
PTCD3-211ENST00000476215 SAP130Q9H0E3 1048 aa9.06□□□□□ -0.96
PTCD3-211ENST00000476215 KRBA1A5PL33 1030 aa9.05□□□□□ -0.96
PTCD3-211ENST00000476215 MICALL1Q8N3F8 863 aa9.05□□□□□ -0.96
PTCD3-211ENST00000476215 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.05□□□□□ -0.96
PTCD3-211ENST00000476215 ALBP02768 609 aa9.04□□□□□ -0.96
PTCD3-211ENST00000476215 KCNA1Q09470 495 aa9.04□□□□□ -0.96
PTCD3-211ENST00000476215 CAPN12Q6ZSI9 719 aa9.04□□□□□ -0.96
PTCD3-211ENST00000476215 TREML1Q86YW5 311 aa9.04□□□□□ -0.96
PTCD3-211ENST00000476215 ETFBKMTQ8IXQ9 262 aa9.04□□□□□ -0.96
PTCD3-211ENST00000476215 NFKB1P19838 968 aa9.03□□□□□ -0.96
PTCD3-211ENST00000476215 BRD2P25440 801 aaKnown RBP9.03□□□□□ -0.96
PTCD3-211ENST00000476215 ARID4AP29374 1257 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms