RNA–Protein interactions for RNA: ENST00000476126.1

SP140-209, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 463 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-209ENST00000476126 HOXB7P09629 217 aa8.99□□□□□ -0.97
SP140-209ENST00000476126 ERFEQ4G0M1 354 aa8.99□□□□□ -0.97
SP140-209ENST00000476126 PARP10Q53GL7 1025 aa8.99□□□□□ -0.97
SP140-209ENST00000476126 HSP90AB3PQ58FF7 597 aa8.99□□□□□ -0.97
SP140-209ENST00000476126 COPS6Q7L5N1 327 aa8.99□□□□□ -0.97
SP140-209ENST00000476126 XAGE3Q8WTP9 111 aa8.99□□□□□ -0.97
SP140-209ENST00000476126 TAOK3Q9H2K8 898 aa8.99□□□□□ -0.97
SP140-209ENST00000476126 DDX21Q9NR30 783 aaKnown RBP eCLIP8.99□□□□□ -0.97
SP140-209ENST00000476126 IFT57Q9NWB7 429 aa8.99□□□□□ -0.97
SP140-209ENST00000476126 ZC3H4Q9UPT8 1303 aaKnown RBP8.99□□□□□ -0.97
SP140-209ENST00000476126 NFKBIEO00221 500 aa8.98□□□□□ -0.97
SP140-209ENST00000476126 ALDH1B1P30837 517 aa8.98□□□□□ -0.97
SP140-209ENST00000476126 PDIA6Q15084 440 aa8.98□□□□□ -0.97
SP140-209ENST00000476126 CCDC93Q567U6 631 aa8.98□□□□□ -0.97
SP140-209ENST00000476126 SUSD4Q5VX71 490 aa8.98□□□□□ -0.97
SP140-209ENST00000476126 DUSP27Q5VZP5 1158 aa8.98□□□□□ -0.97
SP140-209ENST00000476126 NMRK2Q9NPI5 230 aa8.98□□□□□ -0.97
SP140-209ENST00000476126 DBF4Q9UBU7 674 aaPredicted RBP8.98□□□□□ -0.97
SP140-209ENST00000476126 LRRC37AA6NMS7 1700 aa8.97□□□□□ -0.97
SP140-209ENST00000476126 ELL2O00472 640 aaPredicted RBP8.97□□□□□ -0.97
SP140-209ENST00000476126 KIF3CO14782 793 aa8.97□□□□□ -0.97
SP140-209ENST00000476126 NTSR2O95665 410 aa8.97□□□□□ -0.97
SP140-209ENST00000476126 ZNF34Q8IZ26 560 aa8.97□□□□□ -0.97
SP140-209ENST00000476126 UTP14AQ9BVJ6 771 aaKnown RBP8.97□□□□□ -0.97
SP140-209ENST00000476126 GOLGA2Q08379 1002 aa8.96□□□□□ -0.98
SP140-209ENST00000476126 LRP10Q7Z4F1 713 aa8.96□□□□□ -0.98
SP140-209ENST00000476126 RBM17Q96I25 401 aaKnown RBP8.96□□□□□ -0.98
SP140-209ENST00000476126 NLRP3Q96P20 1036 aa8.96□□□□□ -0.98
SP140-209ENST00000476126 TMX4Q9H1E5 349 aaPredicted RBP8.96□□□□□ -0.98
SP140-209ENST00000476126 HYPKQ9NX55 129 aa8.96□□□□□ -0.98
SP140-209ENST00000476126 SALL2Q9Y467 1007 aaPredicted RBP8.96□□□□□ -0.98
SP140-209ENST00000476126 RNF123Q5XPI4 1314 aa8.96□□□□□ -0.98
SP140-209ENST00000476126 LTBP3Q9NS15 1303 aa8.96□□□□□ -0.98
SP140-209ENST00000476126 KLRG2A4D1S0 409 aaPredicted RBP8.95□□□□□ -0.98
SP140-209ENST00000476126 TCERG1O14776 1098 aaKnown RBP8.95□□□□□ -0.98
SP140-209ENST00000476126 TOMM70O94826 608 aa8.95□□□□□ -0.98
SP140-209ENST00000476126 ZNF853P0CG23 659 aa8.95□□□□□ -0.98
SP140-209ENST00000476126 PRELPP51888 382 aa8.95□□□□□ -0.98
SP140-209ENST00000476126 C1QBPQ07021 282 aaKnown RBP8.95□□□□□ -0.98
SP140-209ENST00000476126 TCIRG1Q13488 830 aa8.95□□□□□ -0.98
SP140-209ENST00000476126 DPY19L2Q6NUT2 758 aa8.95□□□□□ -0.98
SP140-209ENST00000476126 ANKRD13DQ6ZTN6 518 aa8.95□□□□□ -0.98
SP140-209ENST00000476126 RIC3Q7Z5B4 369 aa8.95□□□□□ -0.98
SP140-209ENST00000476126 FAM9BQ8IZU0 186 aa8.95□□□□□ -0.98
SP140-209ENST00000476126 PLBD2Q8NHP8 589 aa8.95□□□□□ -0.98
SP140-209ENST00000476126 TSR2Q969E8 191 aaKnown RBP8.95□□□□□ -0.98
SP140-209ENST00000476126 ZNF428Q96B54 188 aa8.95□□□□□ -0.98
SP140-209ENST00000476126 CHMP4AQ9BY43 222 aa8.95□□□□□ -0.98
SP140-209ENST00000476126 RRAGCQ9HB90 399 aa8.95□□□□□ -0.98
SP140-209ENST00000476126 TRMT112Q9UI30 125 aaKnown RBP8.95□□□□□ -0.98
SP140-209ENST00000476126 GLTPD2A6NH11 291 aa8.94□□□□□ -0.98
SP140-209ENST00000476126 PPEF1O14829 653 aaPredicted RBP8.94□□□□□ -0.98
SP140-209ENST00000476126 FKBP4Q02790 459 aaKnown RBP eCLIP8.94□□□□□ -0.98
SP140-209ENST00000476126 CCDC27Q2M243 656 aa8.94□□□□□ -0.98
SP140-209ENST00000476126 CRY2Q49AN0 593 aa8.94□□□□□ -0.98
SP140-209ENST00000476126 CCDC30Q5VVM6 783 aa8.94□□□□□ -0.98
SP140-209ENST00000476126 OLFM4Q6UX06 510 aa8.94□□□□□ -0.98
SP140-209ENST00000476126 NLRP10Q86W26 655 aa8.94□□□□□ -0.98
SP140-209ENST00000476126 RTKN2Q8IZC4 609 aa8.94□□□□□ -0.98
SP140-209ENST00000476126 STK31Q9BXU1 1019 aa8.94□□□□□ -0.98
SP140-209ENST00000476126 SH3TC1Q8TE82 1336 aa8.94□□□□□ -0.98
SP140-209ENST00000476126 ATP5J2-PTCD1G3V325 749 aa8.93□□□□□ -0.98
SP140-209ENST00000476126 DDX58O95786 925 aaKnown RBP8.93□□□□□ -0.98
SP140-209ENST00000476126 HSPA6P17066 643 aa8.93□□□□□ -0.98
SP140-209ENST00000476126 RTL5Q5HYW3 569 aaPredicted RBP8.93□□□□□ -0.98
SP140-209ENST00000476126 WWC1Q8IX03 1113 aa8.93□□□□□ -0.98
SP140-209ENST00000476126 C8orf58Q8NAV2 365 aa8.93□□□□□ -0.98
SP140-209ENST00000476126 PHAXQ9H814 394 aaKnown RBP8.93□□□□□ -0.98
SP140-209ENST00000476126 ZNF277Q9NRM2 450 aaPredicted RBP8.93□□□□□ -0.98
SP140-209ENST00000476126 TRPM7Q96QT4 1865 aa8.92□□□□□ -0.98
SP140-209ENST00000476126 PSME4Q14997 1843 aa8.92□□□□□ -0.98
SP140-209ENST00000476126 A0A1B0GUL6 1792 aa8.92□□□□□ -0.98
SP140-209ENST00000476126 ABCC4O15439 1325 aa8.92□□□□□ -0.98
SP140-209ENST00000476126 HCLS1P14317 486 aaPredicted RBP8.92□□□□□ -0.98
SP140-209ENST00000476126 VEGFAP15692 232 aaPredicted RBP8.92□□□□□ -0.98
SP140-209ENST00000476126 IARSP41252 1262 aaKnown RBP8.92□□□□□ -0.98
SP140-209ENST00000476126 TWISTNBQ3B726 338 aaPredicted RBP8.92□□□□□ -0.98
SP140-209ENST00000476126 CC2D2BQ6DHV5 1058 aa8.92□□□□□ -0.98
SP140-209ENST00000476126 C3orf67Q6ZVT6 689 aa8.92□□□□□ -0.98
SP140-209ENST00000476126 DDX46Q7L014 1031 aaKnown RBP8.92□□□□□ -0.98
SP140-209ENST00000476126 RBM46Q8TBY0 533 aaKnown RBP8.92□□□□□ -0.98
SP140-209ENST00000476126 CRAMP1Q96RY5 1269 aa8.92□□□□□ -0.98
SP140-209ENST00000476126 MYD88Q99836 296 aa8.92□□□□□ -0.98
SP140-209ENST00000476126 LTBP1Q14766 1721 aa8.91□□□□□ -0.98
SP140-209ENST00000476126 IL16Q14005 1332 aa8.91□□□□□ -0.98
SP140-209ENST00000476126 FANCIQ9NVI1 1328 aa8.91□□□□□ -0.98
SP140-209ENST00000476126 HOXA10P31260 410 aaPredicted RBP8.91□□□□□ -0.98
SP140-209ENST00000476126 SYNE4Q8N205 404 aa8.91□□□□□ -0.98
SP140-209ENST00000476126 TSPYL6Q8N831 410 aa8.91□□□□□ -0.98
SP140-209ENST00000476126 C7orf43Q8WVR3 580 aa8.91□□□□□ -0.98
SP140-209ENST00000476126 JDP2Q8WYK2 163 aa8.91□□□□□ -0.98
SP140-209ENST00000476126 FAM89AQ96GI7 184 aa8.91□□□□□ -0.98
SP140-209ENST00000476126 ISCA1Q9BUE6 129 aa8.91□□□□□ -0.98
SP140-209ENST00000476126 SNED1Q8TER0 1413 aa8.9□□□□□ -0.98
SP140-209ENST00000476126 DDNO94850 711 aaPredicted RBP8.9□□□□□ -0.98
SP140-209ENST00000476126 NEXNQ0ZGT2 675 aa8.9□□□□□ -0.98
SP140-209ENST00000476126 GRIPAP1Q4V328 841 aa8.9□□□□□ -0.98
SP140-209ENST00000476126 SLC10A5Q5PT55 438 aa8.9□□□□□ -0.98
SP140-209ENST00000476126 LARGE2Q8N3Y3 721 aa8.9□□□□□ -0.98
SP140-209ENST00000476126 SMC1BQ8NDV3 1235 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms