RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, human

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD3-208	ENST00000475912	KCNQ4	P56696	695 aa		9.41	□□□□□ -0.9
PRKD3-208	ENST00000475912	SNRPN	P63162	240 aa	Known RBP	9.41	□□□□□ -0.9
PRKD3-208	ENST00000475912	SPEM2	Q0P670	501 aa		9.41	□□□□□ -0.9
PRKD3-208	ENST00000475912	IER5	Q5VY09	327 aa		9.41	□□□□□ -0.9
PRKD3-208	ENST00000475912	RRAGC	Q9HB90	399 aa		9.41	□□□□□ -0.9
PRKD3-208	ENST00000475912	RASSF7	Q02833	373 aa		9.4	□□□□□ -0.9
PRKD3-208	ENST00000475912	PODN	Q7Z5L7	613 aa		9.4	□□□□□ -0.9
PRKD3-208	ENST00000475912	MYO19	Q96H55	970 aa		9.4	□□□□□ -0.9
PRKD3-208	ENST00000475912	MKNK1	Q9BUB5	465 aa		9.4	□□□□□ -0.9
PRKD3-208	ENST00000475912	CXXC1	Q9P0U4	656 aa	Predicted RBP	9.4	□□□□□ -0.9
PRKD3-208	ENST00000475912	SLAIN2	Q9P270	581 aa		9.4	□□□□□ -0.9
PRKD3-208	ENST00000475912	DMGDH	Q9UI17	866 aa	Known RBP	9.4	□□□□□ -0.9
PRKD3-208	ENST00000475912	LRFN2	Q9ULH4	789 aa		9.4	□□□□□ -0.9
PRKD3-208	ENST00000475912	CLP1	Q92989	425 aa	Known RBP	9.39	□□□□□ -0.91
PRKD3-208	ENST00000475912	BTBD6	Q96KE9	485 aa		9.39	□□□□□ -0.91
PRKD3-208	ENST00000475912	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	9.39	□□□□□ -0.91
PRKD3-208	ENST00000475912	C11orf91	Q3C1V1	193 aa		9.38	□□□□□ -0.91
PRKD3-208	ENST00000475912	KCTD17	Q8N5Z5	321 aa		9.38	□□□□□ -0.91
PRKD3-208	ENST00000475912	BEND7	Q8N7W2	519 aa	Predicted RBP	9.38	□□□□□ -0.91
PRKD3-208	ENST00000475912	PHF20L1	A8MW92	1017 aa		9.37	□□□□□ -0.91
PRKD3-208	ENST00000475912	HOXB4	P17483	251 aa	Predicted RBP	9.37	□□□□□ -0.91
PRKD3-208	ENST00000475912	IDH3A	P50213	366 aa		9.37	□□□□□ -0.91
PRKD3-208	ENST00000475912	COX20	Q5RI15	118 aa		9.37	□□□□□ -0.91
PRKD3-208	ENST00000475912	CAPN12	Q6ZSI9	719 aa		9.37	□□□□□ -0.91
PRKD3-208	ENST00000475912	CHSY3	Q70JA7	882 aa		9.37	□□□□□ -0.91
PRKD3-208	ENST00000475912	SIN3B	O75182	1162 aa		9.36	□□□□□ -0.91
PRKD3-208	ENST00000475912	GDF11	O95390	407 aa		9.36	□□□□□ -0.91
PRKD3-208	ENST00000475912	TMEM151A	Q8N4L1	468 aa		9.36	□□□□□ -0.91
PRKD3-208	ENST00000475912	BHMT	Q93088	406 aa		9.36	□□□□□ -0.91
PRKD3-208	ENST00000475912	SAP130	Q9H0E3	1048 aa		9.36	□□□□□ -0.91
PRKD3-208	ENST00000475912	PPP1R15A	O75807	674 aa	Predicted RBP	9.35	□□□□□ -0.91
PRKD3-208	ENST00000475912	MICAL2	O94851	1124 aa		9.35	□□□□□ -0.91
PRKD3-208	ENST00000475912	GRN	P28799	593 aa	Known RBP	9.35	□□□□□ -0.91
PRKD3-208	ENST00000475912	INPP5B	P32019	993 aa		9.35	□□□□□ -0.91
PRKD3-208	ENST00000475912	NEUROD1	Q13562	356 aa		9.35	□□□□□ -0.91
PRKD3-208	ENST00000475912	KANK3	Q6NY19	840 aa		9.35	□□□□□ -0.91
PRKD3-208	ENST00000475912	IFT43	Q96FT9	208 aa		9.35	□□□□□ -0.91
PRKD3-208	ENST00000475912	MKL2	Q9ULH7	1088 aa		9.35	□□□□□ -0.91
PRKD3-208	ENST00000475912	ELOA3C	A0A087WX78	387 aa	Predicted RBP	9.34	□□□□□ -0.91
PRKD3-208	ENST00000475912	ELOA3D	A6NLF2	546 aa	Predicted RBP	9.34	□□□□□ -0.91
PRKD3-208	ENST00000475912	SUPT5H	O00267	1087 aa	Known RBP	9.34	□□□□□ -0.91
PRKD3-208	ENST00000475912	ATP2B4	P23634	1241 aa		9.34	□□□□□ -0.91
PRKD3-208	ENST00000475912	ARSD	P51689	593 aa		9.34	□□□□□ -0.91
PRKD3-208	ENST00000475912	NAA30	Q147X3	362 aa	Predicted RBP	9.34	□□□□□ -0.91
PRKD3-208	ENST00000475912	ELOA3B	Q3SY89	546 aa		9.34	□□□□□ -0.91
PRKD3-208	ENST00000475912	ERICH6	Q7L0X2	663 aa		9.34	□□□□□ -0.91
PRKD3-208	ENST00000475912	ELOA3	Q8NG57	546 aa		9.34	□□□□□ -0.91
PRKD3-208	ENST00000475912	COL26A1	Q96A83	441 aa		9.34	□□□□□ -0.91
PRKD3-208	ENST00000475912	MDFI	Q99750	246 aa		9.34	□□□□□ -0.91
PRKD3-208	ENST00000475912	TIMELESS	Q9UNS1	1208 aa		9.34	□□□□□ -0.91
PRKD3-208	ENST00000475912	EPB42	P16452	691 aa		9.33	□□□□□ -0.92
PRKD3-208	ENST00000475912	DGKG	P49619	791 aa		9.33	□□□□□ -0.92
PRKD3-208	ENST00000475912	C16orf46	Q6P387	395 aa		9.33	□□□□□ -0.92
PRKD3-208	ENST00000475912	LINC00114	Q6XXX2	140 aa		9.33	□□□□□ -0.92
PRKD3-208	ENST00000475912	TNFRSF25	Q93038	417 aa		9.33	□□□□□ -0.92
PRKD3-208	ENST00000475912	GSX2	Q9BZM3	304 aa		9.33	□□□□□ -0.92
PRKD3-208	ENST00000475912	PTCD1	O75127	700 aa	Known RBP	9.32	□□□□□ -0.92
PRKD3-208	ENST00000475912	ALAS2	P22557	587 aa		9.32	□□□□□ -0.92
PRKD3-208	ENST00000475912	TREML1	Q86YW5	311 aa		9.32	□□□□□ -0.92
PRKD3-208	ENST00000475912	ARID3A	Q99856	593 aa		9.32	□□□□□ -0.92
PRKD3-208	ENST00000475912	USP20	Q9Y2K6	914 aa		9.32	□□□□□ -0.92
PRKD3-208	ENST00000475912	RB1CC1	Q8TDY2	1594 aa		9.32	□□□□□ -0.92
PRKD3-208	ENST00000475912	TMEM88B	A6NKF7	163 aa		9.31	□□□□□ -0.92
PRKD3-208	ENST00000475912	ADARB2-AS1	A8MUL3	147 aa		9.31	□□□□□ -0.92
PRKD3-208	ENST00000475912	OPLAH	O14841	1288 aa		9.31	□□□□□ -0.92
PRKD3-208	ENST00000475912	TBC1D8B	Q0IIM8	1120 aa		9.31	□□□□□ -0.92
PRKD3-208	ENST00000475912	CCIN	Q13939	588 aa		9.31	□□□□□ -0.92
PRKD3-208	ENST00000475912	PNMA5	Q96PV4	448 aa		9.31	□□□□□ -0.92
PRKD3-208	ENST00000475912	TNFRSF10B	O14763	440 aa		9.3	□□□□□ -0.92
PRKD3-208	ENST00000475912	NFKB1	P19838	968 aa		9.3	□□□□□ -0.92
PRKD3-208	ENST00000475912	ADH7	P40394	386 aa		9.3	□□□□□ -0.92
PRKD3-208	ENST00000475912	FAM26D	Q5JW98	314 aa		9.3	□□□□□ -0.92
PRKD3-208	ENST00000475912	ETFBKMT	Q8IXQ9	262 aa		9.3	□□□□□ -0.92
PRKD3-208	ENST00000475912	IGFLR1	Q9H665	355 aa		9.3	□□□□□ -0.92
PRKD3-208	ENST00000475912	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	9.3	□□□□□ -0.92
PRKD3-208	ENST00000475912	CARNS1	A5YM72	827 aa		9.29	□□□□□ -0.92
PRKD3-208	ENST00000475912	BRD2	P25440	801 aa	Known RBP	9.29	□□□□□ -0.92
PRKD3-208	ENST00000475912	KRT25	Q7Z3Z0	450 aa		9.29	□□□□□ -0.92
PRKD3-208	ENST00000475912	RGL4	Q8IZJ4	473 aa		9.29	□□□□□ -0.92
PRKD3-208	ENST00000475912	UBE2O	Q9C0C9	1292 aa	Known RBP	9.29	□□□□□ -0.92
PRKD3-208	ENST00000475912	SUV39H2	Q9H5I1	410 aa		9.29	□□□□□ -0.92
PRKD3-208	ENST00000475912	SEPT3	Q9UH03	358 aa		9.29	□□□□□ -0.92
PRKD3-208	ENST00000475912	STARD13	Q9Y3M8	1113 aa		9.29	□□□□□ -0.92
PRKD3-208	ENST00000475912	GNB5	O14775	395 aa		9.28	□□□□□ -0.92
PRKD3-208	ENST00000475912	SCNN1A	P37088	669 aa		9.28	□□□□□ -0.92
PRKD3-208	ENST00000475912	DCAF5	Q96JK2	942 aa		9.28	□□□□□ -0.92
PRKD3-208	ENST00000475912	RTCB	Q9Y3I0	505 aa	Known RBP	9.28	□□□□□ -0.92
PRKD3-208	ENST00000475912	COL8A1	P27658	744 aa		9.27	□□□□□ -0.93
PRKD3-208	ENST00000475912	CMTR1	Q8N1G2	835 aa	Known RBP	9.27	□□□□□ -0.93
PRKD3-208	ENST00000475912	EFCC1	Q9HA90	598 aa		9.27	□□□□□ -0.93
PRKD3-208	ENST00000475912	ZFAT	Q9P243	1243 aa		9.27	□□□□□ -0.93
PRKD3-208	ENST00000475912	SASH3	O75995	380 aa		9.26	□□□□□ -0.93
PRKD3-208	ENST00000475912	ALB	P02768	609 aa		9.26	□□□□□ -0.93
PRKD3-208	ENST00000475912	C8orf86	Q6ZUL3	223 aa		9.26	□□□□□ -0.93
PRKD3-208	ENST00000475912		M0R082	166 aa		9.25	□□□□□ -0.93
PRKD3-208	ENST00000475912	PIK3R2	O00459	728 aa		9.25	□□□□□ -0.93
PRKD3-208	ENST00000475912	TARS	P26639	723 aa	Known RBP	9.25	□□□□□ -0.93
PRKD3-208	ENST00000475912	ZNF417	Q8TAU3	575 aa		9.25	□□□□□ -0.93
PRKD3-208	ENST00000475912	ZNF587	Q96SQ5	575 aa	Predicted RBP	9.25	□□□□□ -0.93
PRKD3-208	ENST00000475912	DNAJB12	Q9NXW2	375 aa	Known RBP	9.25	□□□□□ -0.93

Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms