RNA–Protein interactions for RNA: ENST00000475795.5

UBE4B-208, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-208ENST00000475795 C19orf67A6NJJ6 358 aa9.53□□□□□ -0.88
UBE4B-208ENST00000475795 DDNO94850 711 aaPredicted RBP9.53□□□□□ -0.88
UBE4B-208ENST00000475795 NFE2L2Q16236 605 aa9.53□□□□□ -0.88
UBE4B-208ENST00000475795 FAM212AQ96EL1 285 aa9.53□□□□□ -0.88
UBE4B-208ENST00000475795 PCNTO95613 3336 aa9.53□□□□□ -0.88
UBE4B-208ENST00000475795 ABCC12Q96J65 1359 aa9.52□□□□□ -0.88
UBE4B-208ENST00000475795 FAM177BA6PVY3 158 aa9.52□□□□□ -0.89
UBE4B-208ENST00000475795 ERVV-1B6SEH8 477 aa9.52□□□□□ -0.89
UBE4B-208ENST00000475795 EIF4A1P60842 406 aaKnown RBP9.52□□□□□ -0.89
UBE4B-208ENST00000475795 FKBP4Q02790 459 aaKnown RBP eCLIP9.52□□□□□ -0.89
UBE4B-208ENST00000475795 RIC1Q4ADV7 1423 aa9.52□□□□□ -0.89
UBE4B-208ENST00000475795 DCAF8Q5TAQ9 597 aa9.52□□□□□ -0.89
UBE4B-208ENST00000475795 RTKN2Q8IZC4 609 aa9.52□□□□□ -0.89
UBE4B-208ENST00000475795 L3MBTL3Q96JM7 780 aaPredicted RBP9.52□□□□□ -0.89
UBE4B-208ENST00000475795 NYXQ9GZU5 481 aa9.52□□□□□ -0.89
UBE4B-208ENST00000475795 PNNQ9H307 717 aaKnown RBP9.52□□□□□ -0.89
UBE4B-208ENST00000475795 ANKRD36CQ5JPF3 1778 aa9.52□□□□□ -0.89
UBE4B-208ENST00000475795 ADAMTSL1Q8N6G6 1762 aa9.52□□□□□ -0.89
UBE4B-208ENST00000475795 MAP3K15Q6ZN16 1313 aa9.52□□□□□ -0.89
UBE4B-208ENST00000475795 IBTKQ9P2D0 1353 aaPredicted RBP9.51□□□□□ -0.89
UBE4B-208ENST00000475795 SNED1Q8TER0 1413 aa9.51□□□□□ -0.89
UBE4B-208ENST00000475795 IQCA1LA6NCM1 817 aa9.51□□□□□ -0.89
UBE4B-208ENST00000475795 POTEIP0CG38 1075 aa9.51□□□□□ -0.89
UBE4B-208ENST00000475795 POTEJP0CG39 1038 aa9.51□□□□□ -0.89
UBE4B-208ENST00000475795 GTF2E1P29083 439 aaPredicted RBP9.51□□□□□ -0.89
UBE4B-208ENST00000475795 ALDH1B1P30837 517 aa9.51□□□□□ -0.89
UBE4B-208ENST00000475795 CRY2Q49AN0 593 aa9.51□□□□□ -0.89
UBE4B-208ENST00000475795 OLFM4Q6UX06 510 aa9.51□□□□□ -0.89
UBE4B-208ENST00000475795 KIF6Q6ZMV9 814 aa9.51□□□□□ -0.89
UBE4B-208ENST00000475795 RASEFQ8IZ41 740 aa9.51□□□□□ -0.89
UBE4B-208ENST00000475795 NGEFQ8N5V2 710 aa9.51□□□□□ -0.89
UBE4B-208ENST00000475795 THUMPD2Q9BTF0 503 aaKnown RBP9.51□□□□□ -0.89
UBE4B-208ENST00000475795 ZNF277Q9NRM2 450 aaPredicted RBP9.51□□□□□ -0.89
UBE4B-208ENST00000475795 CIZ1Q9ULV3 898 aaPredicted RBP9.51□□□□□ -0.89
UBE4B-208ENST00000475795 RRP7AQ9Y3A4 280 aaKnown RBP9.51□□□□□ -0.89
UBE4B-208ENST00000475795 MAPK8IP3Q9UPT6 1336 aa9.51□□□□□ -0.89
UBE4B-208ENST00000475795 TTLL7Q6ZT98 887 aa9.5□□□□□ -0.89
UBE4B-208ENST00000475795 NUTM1Q86Y26 1132 aa9.5□□□□□ -0.89
UBE4B-208ENST00000475795 TAF1DQ9H5J8 278 aaPredicted RBP9.5□□□□□ -0.89
UBE4B-208ENST00000475795 ERBB4Q15303 1308 aa9.5□□□□□ -0.89
UBE4B-208ENST00000475795 UBN2Q6ZU65 1347 aa9.5□□□□□ -0.89
UBE4B-208ENST00000475795 ZNF541Q9H0D2 1346 aa9.5□□□□□ -0.89
UBE4B-208ENST00000475795 LAMB2P55268 1798 aa9.5□□□□□ -0.89
UBE4B-208ENST00000475795 MYL6BP14649 208 aa9.49□□□□□ -0.89
UBE4B-208ENST00000475795 IARSP41252 1262 aaKnown RBP9.49□□□□□ -0.89
UBE4B-208ENST00000475795 COL13A1Q5TAT6 717 aaPredicted RBP9.49□□□□□ -0.89
UBE4B-208ENST00000475795 LDHDQ86WU2 507 aa9.49□□□□□ -0.89
UBE4B-208ENST00000475795 SYNE4Q8N205 404 aa9.49□□□□□ -0.89
UBE4B-208ENST00000475795 PSMD1Q99460 953 aa9.49□□□□□ -0.89
UBE4B-208ENST00000475795 ZBTB3Q9H5J0 574 aa9.49□□□□□ -0.89
UBE4B-208ENST00000475795 FZD9O00144 591 aa9.48□□□□□ -0.89
UBE4B-208ENST00000475795 HSPA1AP0DMV8 641 aaKnown RBP9.48□□□□□ -0.89
UBE4B-208ENST00000475795 HSPA1BP0DMV9 641 aaKnown RBP9.48□□□□□ -0.89
UBE4B-208ENST00000475795 GPTP24298 496 aa9.48□□□□□ -0.89
UBE4B-208ENST00000475795 HOXA10P31260 410 aaPredicted RBP9.48□□□□□ -0.89
UBE4B-208ENST00000475795 NUBP1P53384 320 aa9.48□□□□□ -0.89
UBE4B-208ENST00000475795 SUSD4Q5VX71 490 aa9.48□□□□□ -0.89
UBE4B-208ENST00000475795 CC2D2BQ6DHV5 1058 aa9.48□□□□□ -0.89
UBE4B-208ENST00000475795 GIGYF2Q6Y7W6 1299 aaKnown RBP9.48□□□□□ -0.89
UBE4B-208ENST00000475795 ZNF34Q8IZ26 560 aa9.48□□□□□ -0.89
UBE4B-208ENST00000475795 RPGRQ92834 1020 aaKnown RBP9.48□□□□□ -0.89
UBE4B-208ENST00000475795 TSPYL4Q9UJ04 414 aa9.48□□□□□ -0.89
UBE4B-208ENST00000475795 PASKQ96RG2 1323 aa9.48□□□□□ -0.89
UBE4B-208ENST00000475795 COL4A5P29400 1685 aa9.48□□□□□ -0.89
UBE4B-208ENST00000475795 NTSR2O95665 410 aa9.47□□□□□ -0.89
UBE4B-208ENST00000475795 RIPK4P57078 832 aa9.47□□□□□ -0.89
UBE4B-208ENST00000475795 EVX2Q03828 476 aa9.47□□□□□ -0.89
UBE4B-208ENST00000475795 RALBP1Q15311 655 aa9.47□□□□□ -0.89
UBE4B-208ENST00000475795 GRIPAP1Q4V328 841 aa9.47□□□□□ -0.89
UBE4B-208ENST00000475795 LRP10Q7Z4F1 713 aa9.47□□□□□ -0.89
UBE4B-208ENST00000475795 BABAM1Q9NWV8 329 aa9.47□□□□□ -0.89
UBE4B-208ENST00000475795 HACL1Q9UJ83 578 aa9.47□□□□□ -0.89
UBE4B-208ENST00000475795 LTBP1Q14766 1721 aa9.47□□□□□ -0.89
UBE4B-208ENST00000475795 TRPM7Q96QT4 1865 aa9.47□□□□□ -0.89
UBE4B-208ENST00000475795 EPHX2P34913 555 aa9.46□□□□□ -0.9
UBE4B-208ENST00000475795 LMOD3Q0VAK6 560 aa9.46□□□□□ -0.9
UBE4B-208ENST00000475795 PDIA6Q15084 440 aa9.46□□□□□ -0.9
UBE4B-208ENST00000475795 PARP10Q53GL7 1025 aa9.46□□□□□ -0.9
UBE4B-208ENST00000475795 EAPPQ56P03 285 aaPredicted RBP9.46□□□□□ -0.9
UBE4B-208ENST00000475795 PPP1R42Q7Z4L9 355 aa9.46□□□□□ -0.9
UBE4B-208ENST00000475795 GPC2Q8N158 579 aa9.46□□□□□ -0.9
UBE4B-208ENST00000475795 JDP2Q8WYK2 163 aa9.46□□□□□ -0.9
UBE4B-208ENST00000475795 RBM17Q96I25 401 aaKnown RBP9.46□□□□□ -0.9
UBE4B-208ENST00000475795 CRAMP1Q96RY5 1269 aa9.46□□□□□ -0.9
UBE4B-208ENST00000475795 MKRN1Q9UHC7 482 aaKnown RBP9.46□□□□□ -0.9
UBE4B-208ENST00000475795 RNF123Q5XPI4 1314 aa9.46□□□□□ -0.9
UBE4B-208ENST00000475795 TAF1P21675 1872 aa9.46□□□□□ -0.9
UBE4B-208ENST00000475795 CNTNAP1P78357 1384 aa9.46□□□□□ -0.9
UBE4B-208ENST00000475795 PPEF1O14829 653 aaPredicted RBP9.45□□□□□ -0.9
UBE4B-208ENST00000475795 ITGBL1O95965 494 aaPredicted RBP9.45□□□□□ -0.9
UBE4B-208ENST00000475795 EIF2S2P20042 333 aaKnown RBP9.45□□□□□ -0.9
UBE4B-208ENST00000475795 TMPOP42166 694 aaKnown RBP9.45□□□□□ -0.9
UBE4B-208ENST00000475795 PROSER3Q2NL68 480 aa9.45□□□□□ -0.9
UBE4B-208ENST00000475795 C3orf67Q6ZVT6 689 aa9.45□□□□□ -0.9
UBE4B-208ENST00000475795 PNMA8AQ86V59 439 aaPredicted RBP9.45□□□□□ -0.9
UBE4B-208ENST00000475795 TNS4Q8IZW8 715 aa9.45□□□□□ -0.9
UBE4B-208ENST00000475795 TMEM88BA6NKF7 163 aa9.44□□□□□ -0.9
UBE4B-208ENST00000475795 ANXA1P04083 346 aa9.44□□□□□ -0.9
UBE4B-208ENST00000475795 EIF6P56537 245 aaKnown RBP9.44□□□□□ -0.9
UBE4B-208ENST00000475795 SLC10A5Q5PT55 438 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms