RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 PPP1R42Q7Z4L9 355 aa28.12■■■□□ 2.09
MCF2L2-209ENST00000475664 NYXQ9GZU5 481 aa28.12■■■□□ 2.09
MCF2L2-209ENST00000475664 CWC25Q9NXE8 425 aaPredicted RBP28.12■■■□□ 2.09
MCF2L2-209ENST00000475664 C10orf71Q711Q0 1435 aa28.11■■■□□ 2.09
MCF2L2-209ENST00000475664 CNBD1Q8NA66 436 aa28.11■■■□□ 2.09
MCF2L2-209ENST00000475664 UTP14AQ9BVJ6 771 aaKnown RBP28.11■■■□□ 2.09
MCF2L2-209ENST00000475664 SRCIN1Q9C0H9 1055 aa28.11■■■□□ 2.09
MCF2L2-209ENST00000475664 ANKRD31Q8N7Z5 1873 aa28.1■■■□□ 2.09
MCF2L2-209ENST00000475664 ALDH1L1O75891 902 aa28.1■■■□□ 2.09
MCF2L2-209ENST00000475664 TPTE2Q6XPS3 522 aa28.1■■■□□ 2.09
MCF2L2-209ENST00000475664 RNF123Q5XPI4 1314 aa28.1■■■□□ 2.09
MCF2L2-209ENST00000475664 GCKRQ14397 625 aa28.09■■■□□ 2.09
MCF2L2-209ENST00000475664 LAMB2P55268 1798 aa28.09■■■□□ 2.09
MCF2L2-209ENST00000475664 PLIN1O60240 522 aa28.08■■■□□ 2.09
MCF2L2-209ENST00000475664 CCT4P50991 539 aaKnown RBP28.08■■■□□ 2.09
MCF2L2-209ENST00000475664 NUTM1Q86Y26 1132 aa28.08■■■□□ 2.09
MCF2L2-209ENST00000475664 CLUAP1Q96AJ1 413 aa28.08■■■□□ 2.09
MCF2L2-209ENST00000475664 TRMT112Q9UI30 125 aaKnown RBP28.08■■■□□ 2.09
MCF2L2-209ENST00000475664 ABCC12Q96J65 1359 aa28.08■■■□□ 2.09
MCF2L2-209ENST00000475664 DDX60Q8IY21 1712 aaKnown RBP28.07■■■□□ 2.08
MCF2L2-209ENST00000475664 INTS3Q68E01 1043 aaKnown RBP28.07■■■□□ 2.08
MCF2L2-209ENST00000475664 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.07■■■□□ 2.08
MCF2L2-209ENST00000475664 PCCAP05165 728 aaPredicted RBP28.06■■■□□ 2.08
MCF2L2-209ENST00000475664 ERFEQ4G0M1 354 aa28.06■■■□□ 2.08
MCF2L2-209ENST00000475664 DZIP1LQ8IYY4 767 aaKnown RBP28.06■■■□□ 2.08
MCF2L2-209ENST00000475664 CCDC24Q8N4L8 307 aa28.06■■■□□ 2.08
MCF2L2-209ENST00000475664 ZBTB38Q8NAP3 1195 aaPredicted RBP28.06■■■□□ 2.08
MCF2L2-209ENST00000475664 SH3TC1Q8TE82 1336 aa28.06■■■□□ 2.08
MCF2L2-209ENST00000475664 RIC1Q4ADV7 1423 aa28.06■■■□□ 2.08
MCF2L2-209ENST00000475664 TNRC6CQ9HCJ0 1690 aaKnown RBP28.06■■■□□ 2.08
MCF2L2-209ENST00000475664 NPHP1O15259 732 aa28.05■■■□□ 2.08
MCF2L2-209ENST00000475664 RLBP1P12271 317 aa28.05■■■□□ 2.08
MCF2L2-209ENST00000475664 ST5P78524 1137 aa28.05■■■□□ 2.08
MCF2L2-209ENST00000475664 KIAA1551Q9HCM1 1747 aa28.04■■■□□ 2.08
MCF2L2-209ENST00000475664 GTF2E1P29083 439 aaPredicted RBP28.04■■■□□ 2.08
MCF2L2-209ENST00000475664 RRP1P56182 461 aaKnown RBP28.04■■■□□ 2.08
MCF2L2-209ENST00000475664 FTSJ3Q8IY81 847 aaKnown RBP28.04■■■□□ 2.08
MCF2L2-209ENST00000475664 SYNE4Q8N205 404 aa28.04■■■□□ 2.08
MCF2L2-209ENST00000475664 TMEM57Q8N5G2 664 aa28.04■■■□□ 2.08
MCF2L2-209ENST00000475664 FAM89AQ96GI7 184 aa28.04■■■□□ 2.08
MCF2L2-209ENST00000475664 H7C1W4 665 aa28.03■■■□□ 2.08
MCF2L2-209ENST00000475664 MS4A1P11836 297 aa28.03■■■□□ 2.08
MCF2L2-209ENST00000475664 GRM8O00222 908 aa28.02■■■□□ 2.08
MCF2L2-209ENST00000475664 RTL5Q5HYW3 569 aaPredicted RBP28.02■■■□□ 2.08
MCF2L2-209ENST00000475664 SLC10A5Q5PT55 438 aa28.02■■■□□ 2.08
MCF2L2-209ENST00000475664 PPP1R1BQ9UD71 204 aaPredicted RBP28.02■■■□□ 2.08
MCF2L2-209ENST00000475664 CDHR2Q9BYE9 1310 aa28.01■■■□□ 2.07
MCF2L2-209ENST00000475664 CASP7P55210 303 aa28.01■■■□□ 2.07
MCF2L2-209ENST00000475664 UBE3BQ7Z3V4 1068 aa28.01■■■□□ 2.07
MCF2L2-209ENST00000475664 PANK1Q8TE04 598 aa28.01■■■□□ 2.07
MCF2L2-209ENST00000475664 JARID2Q92833 1246 aaPredicted RBP28.01■■■□□ 2.07
MCF2L2-209ENST00000475664 BRIP1Q9BX63 1249 aa28.01■■■□□ 2.07
MCF2L2-209ENST00000475664 CD2APQ9Y5K6 639 aa28.01■■■□□ 2.07
MCF2L2-209ENST00000475664 COL11A2P13942 1736 aaPredicted RBP28.01■■■□□ 2.07
MCF2L2-209ENST00000475664 UTYO14607 1347 aa28■■■□□ 2.07
MCF2L2-209ENST00000475664 PDE3AQ14432 1141 aa28■■■□□ 2.07
MCF2L2-209ENST00000475664 MYH3P11055 1940 aa27.99■■■□□ 2.07
MCF2L2-209ENST00000475664 USP44Q9H0E7 712 aa27.99■■■□□ 2.07
MCF2L2-209ENST00000475664 C9orf78Q9NZ63 289 aaPredicted RBP27.99■■■□□ 2.07
MCF2L2-209ENST00000475664 IRS4O14654 1257 aaPredicted RBP27.98■■■□□ 2.07
MCF2L2-209ENST00000475664 HCLS1P14317 486 aaPredicted RBP27.98■■■□□ 2.07
MCF2L2-209ENST00000475664 C20orf194Q5TEA3 1177 aa27.98■■■□□ 2.07
MCF2L2-209ENST00000475664 DLEC1Q9Y238 1755 aa27.98■■■□□ 2.07
MCF2L2-209ENST00000475664 KLHL34Q8N239 644 aa27.97■■■□□ 2.07
MCF2L2-209ENST00000475664 FHDC1Q9C0D6 1143 aaPredicted RBP27.97■■■□□ 2.07
MCF2L2-209ENST00000475664 KLRG2A4D1S0 409 aaPredicted RBP27.96■■■□□ 2.07
MCF2L2-209ENST00000475664 NBPF7P0C2Y1 421 aaPredicted RBP27.96■■■□□ 2.07
MCF2L2-209ENST00000475664 PDE6BP35913 854 aa27.96■■■□□ 2.07
MCF2L2-209ENST00000475664 SUPT16HQ9Y5B9 1047 aaKnown RBP27.96■■■□□ 2.07
MCF2L2-209ENST00000475664 C3orf67Q6ZVT6 689 aa27.95■■■□□ 2.06
MCF2L2-209ENST00000475664 ITPRIPQ8IWB1 547 aa27.95■■■□□ 2.06
MCF2L2-209ENST00000475664 HSP90B1P14625 803 aaKnown RBP27.94■■■□□ 2.06
MCF2L2-209ENST00000475664 MEIS3Q99687 375 aa27.94■■■□□ 2.06
MCF2L2-209ENST00000475664 PLA2G12BQ9BX93 195 aa27.94■■■□□ 2.06
MCF2L2-209ENST00000475664 PDE8AO60658 829 aa27.93■■■□□ 2.06
MCF2L2-209ENST00000475664 CENPBP07199 599 aaPredicted RBP27.93■■■□□ 2.06
MCF2L2-209ENST00000475664 TGFB2P61812 414 aa27.93■■■□□ 2.06
MCF2L2-209ENST00000475664 MVPQ14764 893 aaKnown RBP27.93■■■□□ 2.06
MCF2L2-209ENST00000475664 NLRP3Q96P20 1036 aa27.93■■■□□ 2.06
MCF2L2-209ENST00000475664 BRCA1P38398 1863 aaKnown RBP27.93■■■□□ 2.06
MCF2L2-209ENST00000475664 CRY2Q49AN0 593 aa27.92■■■□□ 2.06
MCF2L2-209ENST00000475664 PDZRN3Q9UPQ7 1066 aa27.92■■■□□ 2.06
MCF2L2-209ENST00000475664 COG6Q9Y2V7 657 aa27.92■■■□□ 2.06
MCF2L2-209ENST00000475664 C2CD5Q86YS7 1000 aa27.91■■■□□ 2.06
MCF2L2-209ENST00000475664 NLGN2Q8NFZ4 835 aa27.91■■■□□ 2.06
MCF2L2-209ENST00000475664 SUCLG2Q96I99 432 aa27.91■■■□□ 2.06
MCF2L2-209ENST00000475664 SYT17Q9BSW7 474 aa27.91■■■□□ 2.06
MCF2L2-209ENST00000475664 CHRNA5P30532 468 aa27.9■■■□□ 2.06
MCF2L2-209ENST00000475664 KAZALD1Q96I82 304 aa27.9■■■□□ 2.06
MCF2L2-209ENST00000475664 SRCAPQ6ZRS2 3230 aa27.89■■■□□ 2.06
MCF2L2-209ENST00000475664 H0YIN7 160 aa27.89■■■□□ 2.06
MCF2L2-209ENST00000475664 GNAI3P08754 354 aa27.89■■■□□ 2.06
MCF2L2-209ENST00000475664 UBTFL1P0CB47 393 aaPredicted RBP27.89■■■□□ 2.06
MCF2L2-209ENST00000475664 SRGNP10124 158 aa27.89■■■□□ 2.06
MCF2L2-209ENST00000475664 DPEP1P16444 411 aa27.89■■■□□ 2.06
MCF2L2-209ENST00000475664 CTSWP56202 376 aa27.89■■■□□ 2.06
MCF2L2-209ENST00000475664 SF3B3Q15393 1217 aaKnown RBP27.89■■■□□ 2.06
MCF2L2-209ENST00000475664 ZBTB7BO15156 539 aaPredicted RBP27.88■■■□□ 2.05
MCF2L2-209ENST00000475664 FOXO4P98177 505 aa27.88■■■□□ 2.05
MCF2L2-209ENST00000475664 EPHA10Q5JZY3 1008 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms