RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 PRPF40BQ6NWY9 871 aaKnown RBP17.02■□□□□ 0.31
UBXN11-214ENST00000475591 ZCRB1Q8TBF4 217 aaKnown RBP17.02■□□□□ 0.31
UBXN11-214ENST00000475591 INTS4Q96HW7 963 aaKnown RBP17.02■□□□□ 0.31
UBXN11-214ENST00000475591 RBM27Q9P2N5 1060 aaKnown RBP17.02■□□□□ 0.31
UBXN11-214ENST00000475591 A0A087WZG4 1122 aa17.01■□□□□ 0.31
UBXN11-214ENST00000475591 CASTP20810 708 aaKnown RBP17.01■□□□□ 0.31
UBXN11-214ENST00000475591 RFX5P48382 616 aaPredicted RBP17.01■□□□□ 0.31
UBXN11-214ENST00000475591 NMIQ13287 307 aaPredicted RBP17.01■□□□□ 0.31
UBXN11-214ENST00000475591 RUFY3Q7L099 469 aa17.01■□□□□ 0.31
UBXN11-214ENST00000475591 NSFL1CQ9UNZ2 370 aaKnown RBP17.01■□□□□ 0.31
UBXN11-214ENST00000475591 NDUFB9Q9Y6M9 179 aa17.01■□□□□ 0.31
UBXN11-214ENST00000475591 TTLL7Q6ZT98 887 aa17.01■□□□□ 0.31
UBXN11-214ENST00000475591 RUFY2Q8WXA3 655 aa17.01■□□□□ 0.31
UBXN11-214ENST00000475591 STRN4Q9NRL3 753 aa17.01■□□□□ 0.31
UBXN11-214ENST00000475591 ZNF335Q9H4Z2 1342 aaPredicted RBP17.01■□□□□ 0.31
UBXN11-214ENST00000475591 ARFGEF2Q9Y6D5 1785 aa17■□□□□ 0.31
UBXN11-214ENST00000475591 PTPN12Q05209 780 aaKnown RBP17■□□□□ 0.31
UBXN11-214ENST00000475591 COL9A3Q14050 684 aaPredicted RBP17■□□□□ 0.31
UBXN11-214ENST00000475591 AFDNP55196 1824 aaKnown RBP17■□□□□ 0.31
UBXN11-214ENST00000475591 A0A0D9SFI3 127 aa17■□□□□ 0.31
UBXN11-214ENST00000475591 TFCP2Q12800 502 aa17■□□□□ 0.31
UBXN11-214ENST00000475591 RRAGDQ9NQL2 400 aaPredicted RBP17■□□□□ 0.31
UBXN11-214ENST00000475591 SLAIN2Q9P270 581 aa17■□□□□ 0.31
UBXN11-214ENST00000475591 COL5A2P05997 1499 aaPredicted RBP16.99■□□□□ 0.31
UBXN11-214ENST00000475591 PCDH11XQ9BZA7 1347 aa16.99■□□□□ 0.31
UBXN11-214ENST00000475591 PCDH11YQ9BZA8 1340 aa16.99■□□□□ 0.31
UBXN11-214ENST00000475591 LARGE1O95461 756 aa16.99■□□□□ 0.31
UBXN11-214ENST00000475591 A1BGP04217 495 aa16.99■□□□□ 0.31
UBXN11-214ENST00000475591 FAM43AQ8N2R8 423 aa16.99■□□□□ 0.31
UBXN11-214ENST00000475591 PLBD2Q8NHP8 589 aa16.99■□□□□ 0.31
UBXN11-214ENST00000475591 JAKMIP1Q96N16 626 aaKnown RBP16.99■□□□□ 0.31
UBXN11-214ENST00000475591 FSD1Q9BTV5 496 aa16.99■□□□□ 0.31
UBXN11-214ENST00000475591 ISY1Q9ULR0 285 aaKnown RBP16.99■□□□□ 0.31
UBXN11-214ENST00000475591 SOS2Q07890 1332 aaPredicted RBP16.98■□□□□ 0.31
UBXN11-214ENST00000475591 CCDC171Q6TFL3 1326 aa16.98■□□□□ 0.31
UBXN11-214ENST00000475591 CASP7P55210 303 aa16.98■□□□□ 0.31
UBXN11-214ENST00000475591 ZSCAN23Q3MJ62 389 aa16.98■□□□□ 0.31
UBXN11-214ENST00000475591 COPRSQ9NQ92 184 aa16.98■□□□□ 0.31
UBXN11-214ENST00000475591 DBNLQ9UJU6 430 aaKnown RBP16.98■□□□□ 0.31
UBXN11-214ENST00000475591 CHGBP05060 677 aa16.98■□□□□ 0.31
UBXN11-214ENST00000475591 DNAJC5Q9H3Z4 198 aa16.98■□□□□ 0.31
UBXN11-214ENST00000475591 RABL6Q3YEC7 729 aaPredicted RBP16.97■□□□□ 0.31
UBXN11-214ENST00000475591 CCDC9Q9Y3X0 531 aaKnown RBP16.97■□□□□ 0.31
UBXN11-214ENST00000475591 RBM8AQ9Y5S9 174 aaKnown RBP16.97■□□□□ 0.31
UBXN11-214ENST00000475591 RPAP1Q9BWH6 1393 aaPredicted RBP16.97■□□□□ 0.31
UBXN11-214ENST00000475591 PARP4Q9UKK3 1724 aaKnown RBP16.97■□□□□ 0.31
UBXN11-214ENST00000475591 NECTIN1Q15223 517 aa16.97■□□□□ 0.31
UBXN11-214ENST00000475591 TNNI3KQ59H18 835 aa16.97■□□□□ 0.31
UBXN11-214ENST00000475591 LMBR1LQ6UX01 489 aa16.97■□□□□ 0.31
UBXN11-214ENST00000475591 GDPD2Q9HCC8 539 aa16.97■□□□□ 0.31
UBXN11-214ENST00000475591 CHMP3Q9Y3E7 222 aa16.97■□□□□ 0.31
UBXN11-214ENST00000475591 TAF6LQ9Y6J9 622 aa16.97■□□□□ 0.31
UBXN11-214ENST00000475591 FPGT-TNNI3KV9GXZ4 949 aa16.97■□□□□ 0.31
UBXN11-214ENST00000475591 LAMB4A4D0S4 1761 aa16.96■□□□□ 0.31
UBXN11-214ENST00000475591 PLEKHG2Q9H7P9 1386 aa16.96■□□□□ 0.31
UBXN11-214ENST00000475591 ZNF589Q86UQ0 364 aaPredicted RBP16.96■□□□□ 0.31
UBXN11-214ENST00000475591 ZBTB3Q9H5J0 574 aa16.96■□□□□ 0.31
UBXN11-214ENST00000475591 IL2RBP14784 551 aa16.96■□□□□ 0.3
UBXN11-214ENST00000475591 LIMCH1Q9UPQ0 1083 aa16.96■□□□□ 0.3
UBXN11-214ENST00000475591 KCNJ4P48050 445 aa16.95■□□□□ 0.3
UBXN11-214ENST00000475591 CREB3L3Q68CJ9 461 aa16.95■□□□□ 0.3
UBXN11-214ENST00000475591 TMEM63CQ9P1W3 806 aa16.95■□□□□ 0.3
UBXN11-214ENST00000475591 DBNDD2Q9BQY9 259 aa16.95■□□□□ 0.3
UBXN11-214ENST00000475591 PDRG1Q9NUG6 133 aa16.95■□□□□ 0.3
UBXN11-214ENST00000475591 KCPQ6ZWJ8 1503 aa16.95■□□□□ 0.3
UBXN11-214ENST00000475591 STRCQ7RTU9 1775 aa16.95■□□□□ 0.3
UBXN11-214ENST00000475591 FOXO4P98177 505 aa16.94■□□□□ 0.3
UBXN11-214ENST00000475591 MAP4K1Q92918 833 aa16.94■□□□□ 0.3
UBXN11-214ENST00000475591 ERVV-2B6SEH9 535 aa16.94■□□□□ 0.3
UBXN11-214ENST00000475591 ZNF445P59923 1031 aa16.94■□□□□ 0.3
UBXN11-214ENST00000475591 CCDC83Q8IWF9 413 aa16.94■□□□□ 0.3
UBXN11-214ENST00000475591 KCNB2Q92953 911 aa16.94■□□□□ 0.3
UBXN11-214ENST00000475591 SLC27A2O14975 620 aa16.93■□□□□ 0.3
UBXN11-214ENST00000475591 TCEANC2Q96MN5 208 aa16.93■□□□□ 0.3
UBXN11-214ENST00000475591 DNAJC2Q99543 621 aaKnown RBP16.93■□□□□ 0.3
UBXN11-214ENST00000475591 CARD10Q9BWT7 1032 aa16.93■□□□□ 0.3
UBXN11-214ENST00000475591 ZSWIM6Q9HCJ5 1215 aa16.93■□□□□ 0.3
UBXN11-214ENST00000475591 CYP46A1Q9Y6A2 500 aa16.93■□□□□ 0.3
UBXN11-214ENST00000475591 MED23Q9ULK4 1368 aa16.92■□□□□ 0.3
UBXN11-214ENST00000475591 H7C1W4 665 aa16.92■□□□□ 0.3
UBXN11-214ENST00000475591 HIP1O00291 1037 aa16.92■□□□□ 0.3
UBXN11-214ENST00000475591 EVA1CP58658 441 aa16.92■□□□□ 0.3
UBXN11-214ENST00000475591 ST3GAL1Q11201 340 aa16.92■□□□□ 0.3
UBXN11-214ENST00000475591 UBE2Q2Q8WVN8 375 aa16.92■□□□□ 0.3
UBXN11-214ENST00000475591 ZNF330Q9Y3S2 320 aaPredicted RBP16.92■□□□□ 0.3
UBXN11-214ENST00000475591 SHANK3Q9BYB0 1731 aa16.92■□□□□ 0.3
UBXN11-214ENST00000475591 COL15A1P39059 1388 aa16.92■□□□□ 0.3
UBXN11-214ENST00000475591 UBR2Q8IWV8 1755 aa16.92■□□□□ 0.3
UBXN11-214ENST00000475591 GADD45BO75293 160 aaPredicted RBP16.92■□□□□ 0.3
UBXN11-214ENST00000475591 NASPP49321 788 aaPredicted RBP16.92■□□□□ 0.3
UBXN11-214ENST00000475591 PRIM1P49642 420 aaKnown RBP16.92■□□□□ 0.3
UBXN11-214ENST00000475591 NKX1-1Q15270 411 aaPredicted RBP16.92■□□□□ 0.3
UBXN11-214ENST00000475591 WDR33Q9C0J8 1336 aaKnown RBP16.91■□□□□ 0.3
UBXN11-214ENST00000475591 ZKSCAN1P17029 563 aaPredicted RBP16.91■□□□□ 0.3
UBXN11-214ENST00000475591 ATP5JP18859 108 aa16.91■□□□□ 0.3
UBXN11-214ENST00000475591 VPS53Q5VIR6 699 aa16.91■□□□□ 0.3
UBXN11-214ENST00000475591 NECAB1Q8N987 351 aa16.91■□□□□ 0.3
UBXN11-214ENST00000475591 ZNF594Q96JF6 807 aaPredicted RBP16.91■□□□□ 0.3
UBXN11-214ENST00000475591 SEC62Q99442 399 aaKnown RBP16.91■□□□□ 0.3
UBXN11-214ENST00000475591 ABCA3Q99758 1704 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms