RNA–Protein interactions for RNA: ENST00000475580.5

VPS8-222, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 318 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-222ENST00000475580 CCDC30Q5VVM6 783 aa21.39■■□□□ 1.01
VPS8-222ENST00000475580 C9orf131Q5VYM1 1079 aa21.39■■□□□ 1.01
VPS8-222ENST00000475580 PRPF40BQ6NWY9 871 aaKnown RBP21.39■■□□□ 1.01
VPS8-222ENST00000475580 ZNF521Q96K83 1311 aa21.38■■□□□ 1.01
VPS8-222ENST00000475580 TWISTNBQ3B726 338 aaPredicted RBP21.38■■□□□ 1.01
VPS8-222ENST00000475580 C3orf67Q6ZVT6 689 aa21.38■■□□□ 1.01
VPS8-222ENST00000475580 C7orf43Q8WVR3 580 aa21.38■■□□□ 1.01
VPS8-222ENST00000475580 UTP14AQ9BVJ6 771 aaKnown RBP21.38■■□□□ 1.01
VPS8-222ENST00000475580 ZNF219Q9P2Y4 722 aaPredicted RBP21.38■■□□□ 1.01
VPS8-222ENST00000475580 CCER2I3L3R5 266 aa21.37■■□□□ 1.01
VPS8-222ENST00000475580 ISCA1Q9BUE6 129 aa21.37■■□□□ 1.01
VPS8-222ENST00000475580 RNF123Q5XPI4 1314 aa21.36■■□□□ 1.01
VPS8-222ENST00000475580 SLC10A5Q5PT55 438 aa21.36■■□□□ 1.01
VPS8-222ENST00000475580 LAMB2P55268 1798 aa21.36■■□□□ 1.01
VPS8-222ENST00000475580 CCDC88AQ3V6T2 1871 aa21.35■■□□□ 1.01
VPS8-222ENST00000475580 SYNE4Q8N205 404 aa21.35■■□□□ 1.01
VPS8-222ENST00000475580 RNF181Q9P0P0 153 aa21.35■■□□□ 1.01
VPS8-222ENST00000475580 TCERG1O14776 1098 aaKnown RBP21.34■■□□□ 1.01
VPS8-222ENST00000475580 HOXA10P31260 410 aaPredicted RBP21.34■■□□□ 1.01
VPS8-222ENST00000475580 GOLGA2Q08379 1002 aa21.34■■□□□ 1.01
VPS8-222ENST00000475580 CHMP4AQ9BY43 222 aa21.34■■□□□ 1.01
VPS8-222ENST00000475580 DDX60Q8IY21 1712 aaKnown RBP21.33■■□□□ 1.01
VPS8-222ENST00000475580 ATP5J2-PTCD1G3V325 749 aa21.33■■□□□ 1.01
VPS8-222ENST00000475580 EXOSC9Q06265 439 aaKnown RBP21.33■■□□□ 1.01
VPS8-222ENST00000475580 ZNF526Q8TF50 670 aaPredicted RBP21.33■■□□□ 1.01
VPS8-222ENST00000475580 ZNF428Q96B54 188 aa21.33■■□□□ 1.01
VPS8-222ENST00000475580 VAMP4O75379 141 aa21.32■■□□□ 1
VPS8-222ENST00000475580 LMNB1P20700 586 aa21.32■■□□□ 1
VPS8-222ENST00000475580 ALDH1B1P30837 517 aa21.32■■□□□ 1
VPS8-222ENST00000475580 TRIM28Q13263 835 aaKnown RBP21.32■■□□□ 1
VPS8-222ENST00000475580 OLFM4Q6UX06 510 aa21.32■■□□□ 1
VPS8-222ENST00000475580 RIC3Q7Z5B4 369 aa21.32■■□□□ 1
VPS8-222ENST00000475580 TRMT112Q9UI30 125 aaKnown RBP21.32■■□□□ 1
VPS8-222ENST00000475580 TIAM2Q8IVF5 1701 aa21.32■■□□□ 1
VPS8-222ENST00000475580 SH3TC1Q8TE82 1336 aa21.31■■□□□ 1
VPS8-222ENST00000475580 LTBP3Q9NS15 1303 aa21.31■■□□□ 1
VPS8-222ENST00000475580 SNED1Q8TER0 1413 aa21.31■■□□□ 1
VPS8-222ENST00000475580 G2E3Q7L622 706 aa21.31■■□□□ 1
VPS8-222ENST00000475580 NLRP3Q96P20 1036 aa21.31■■□□□ 1
VPS8-222ENST00000475580 GPBP1L1Q9HC44 474 aaPredicted RBP21.31■■□□□ 1
VPS8-222ENST00000475580 DICER1Q9UPY3 1922 aaKnown RBP21.3■■□□□ 1
VPS8-222ENST00000475580 HCLS1P14317 486 aaPredicted RBP21.3■■□□□ 1
VPS8-222ENST00000475580 SOGA3Q5TF21 947 aa21.3■■□□□ 1
VPS8-222ENST00000475580 RPGRQ92834 1020 aaKnown RBP21.3■■□□□ 1
VPS8-222ENST00000475580 STK31Q9BXU1 1019 aa21.3■■□□□ 1
VPS8-222ENST00000475580 MYH16Q9H6N6 1097 aa21.3■■□□□ 1
VPS8-222ENST00000475580 SLC51AQ86UW1 340 aa21.29■■□□□ 1
VPS8-222ENST00000475580 CRAMP1Q96RY5 1269 aa21.29■■□□□ 1
VPS8-222ENST00000475580 METTL22Q9BUU2 404 aaPredicted RBP21.29■■□□□ 1
VPS8-222ENST00000475580 TAOK3Q9H2K8 898 aa21.29■■□□□ 1
VPS8-222ENST00000475580 CACNA1FO60840 1977 aa21.28■■□□□ 1
VPS8-222ENST00000475580 SLC4A2P04920 1241 aa21.28■■□□□ 1
VPS8-222ENST00000475580 CCDC93Q567U6 631 aa21.28■■□□□ 1
VPS8-222ENST00000475580 FAM89AQ96GI7 184 aa21.28■■□□□ 1
VPS8-222ENST00000475580 RBM17Q96I25 401 aaKnown RBP21.28■■□□□ 1
VPS8-222ENST00000475580 MYD88Q99836 296 aa21.28■■□□□ 1
VPS8-222ENST00000475580 DDX58O95786 925 aaKnown RBP21.27■■□□□ 1
VPS8-222ENST00000475580 KSR2Q6VAB6 950 aa21.27■■□□□ 1
VPS8-222ENST00000475580 MAP3K2Q9Y2U5 619 aa21.27■■□□□ 1
VPS8-222ENST00000475580 ZC3H4Q9UPT8 1303 aaKnown RBP21.27■□□□□ 0.99
VPS8-222ENST00000475580 PI4KAP2A4QPH2 592 aa21.26■□□□□ 0.99
VPS8-222ENST00000475580 DIEXFQ68CQ4 756 aaKnown RBP21.26■□□□□ 0.99
VPS8-222ENST00000475580 PI4KAP1Q8N8J0 262 aa21.26■□□□□ 0.99
VPS8-222ENST00000475580 ABCC4O15439 1325 aa21.26■□□□□ 0.99
VPS8-222ENST00000475580 KIF3CO14782 793 aa21.25■□□□□ 0.99
VPS8-222ENST00000475580 FLIIQ13045 1269 aa21.25■□□□□ 0.99
VPS8-222ENST00000475580 TAF1P21675 1872 aa21.24■□□□□ 0.99
VPS8-222ENST00000475580 IGKV5-2P06315 115 aa21.24■□□□□ 0.99
VPS8-222ENST00000475580 FKBP4Q02790 459 aaKnown RBP eCLIP21.24■□□□□ 0.99
VPS8-222ENST00000475580 RTL5Q5HYW3 569 aaPredicted RBP21.24■□□□□ 0.99
VPS8-222ENST00000475580 MIER1Q8N108 512 aa21.24■□□□□ 0.99
VPS8-222ENST00000475580 CCDC191Q8NCU4 936 aa21.24■□□□□ 0.99
VPS8-222ENST00000475580 PPEF1O14829 653 aaPredicted RBP21.23■□□□□ 0.99
VPS8-222ENST00000475580 C1QTNF8P60827 252 aa21.23■□□□□ 0.99
VPS8-222ENST00000475580 RTKN2Q8IZC4 609 aa21.23■□□□□ 0.99
VPS8-222ENST00000475580 ZBTB38Q8NAP3 1195 aaPredicted RBP21.23■□□□□ 0.99
VPS8-222ENST00000475580 NMRK2Q9NPI5 230 aa21.23■□□□□ 0.99
VPS8-222ENST00000475580 COL4A1P02462 1669 aa21.23■□□□□ 0.99
VPS8-222ENST00000475580 IRS4O14654 1257 aaPredicted RBP21.22■□□□□ 0.99
VPS8-222ENST00000475580 CWC25Q9NXE8 425 aaPredicted RBP21.22■□□□□ 0.99
VPS8-222ENST00000475580 E9PSI1 815 aa21.21■□□□□ 0.99
VPS8-222ENST00000475580 PCCAP05165 728 aaPredicted RBP21.21■□□□□ 0.99
VPS8-222ENST00000475580 SLFN5Q08AF3 891 aa21.21■□□□□ 0.99
VPS8-222ENST00000475580 SF3B3Q15393 1217 aaKnown RBP21.21■□□□□ 0.99
VPS8-222ENST00000475580 CC2D2BQ6DHV5 1058 aa21.21■□□□□ 0.99
VPS8-222ENST00000475580 ZNF277Q9NRM2 450 aaPredicted RBP21.21■□□□□ 0.99
VPS8-222ENST00000475580 GLTPD2A6NH11 291 aa21.2■□□□□ 0.98
VPS8-222ENST00000475580 JARID2Q92833 1246 aaPredicted RBP21.2■□□□□ 0.98
VPS8-222ENST00000475580 PSMD1Q99460 953 aa21.2■□□□□ 0.98
VPS8-222ENST00000475580 FKBP5Q13451 457 aaPredicted RBP21.19■□□□□ 0.98
VPS8-222ENST00000475580 GRAPQ13588 217 aa21.19■□□□□ 0.98
VPS8-222ENST00000475580 CWF19L2Q2TBE0 894 aaKnown RBP21.19■□□□□ 0.98
VPS8-222ENST00000475580 DDX46Q7L014 1031 aaKnown RBP21.19■□□□□ 0.98
VPS8-222ENST00000475580 GRAPLQ8TC17 118 aaPredicted RBP21.19■□□□□ 0.98
VPS8-222ENST00000475580 CDCA7LQ96GN5 454 aa21.19■□□□□ 0.98
VPS8-222ENST00000475580 ATP6V0A2Q9Y487 856 aa21.19■□□□□ 0.98
VPS8-222ENST00000475580 KDM2BQ8NHM5 1336 aa21.19■□□□□ 0.98
VPS8-222ENST00000475580 COL4A5P29400 1685 aa21.18■□□□□ 0.98
VPS8-222ENST00000475580 LRRC37AA6NMS7 1700 aa21.18■□□□□ 0.98
VPS8-222ENST00000475580 NEURL1BA8MQ27 555 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms