RNA–Protein interactions for RNA: ENST00000475488.3

SSPO-205, Transcript of SCO-spondin, humanhuman

TSL 1 (best)

Gene SSPO, Length 7,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPO-205ENST00000475488 MRVI1Q9Y6F6 885 aa16.33■□□□□ 0.2
SSPO-205ENST00000475488 UBA7P41226 1012 aa16.32■□□□□ 0.2
SSPO-205ENST00000475488 NBPF6Q5VWK0 638 aa16.32■□□□□ 0.2
SSPO-205ENST00000475488 NBPF5PQ86XG9 351 aaPredicted RBP16.32■□□□□ 0.2
SSPO-205ENST00000475488 NBPF4Q96M43 638 aa16.32■□□□□ 0.2
SSPO-205ENST00000475488 SYCE3A1L190 88 aa16.32■□□□□ 0.2
SSPO-205ENST00000475488 NFE2L2Q16236 605 aa16.32■□□□□ 0.2
SSPO-205ENST00000475488 MCM10Q7L590 875 aa16.32■□□□□ 0.2
SSPO-205ENST00000475488 JADE2Q9NQC1 790 aa16.32■□□□□ 0.2
SSPO-205ENST00000475488 RPGRIP1LQ68CZ1 1315 aa16.31■□□□□ 0.2
SSPO-205ENST00000475488 FGD6Q6ZV73 1430 aa16.31■□□□□ 0.2
SSPO-205ENST00000475488 CTAGE5O15320 804 aa16.31■□□□□ 0.2
SSPO-205ENST00000475488 POLD1P28340 1107 aa16.31■□□□□ 0.2
SSPO-205ENST00000475488 ATP2B3Q16720 1220 aa16.31■□□□□ 0.2
SSPO-205ENST00000475488 SMARCA5O60264 1052 aaPredicted RBP16.31■□□□□ 0.2
SSPO-205ENST00000475488 ATAD2Q6PL18 1390 aa16.31■□□□□ 0.2
SSPO-205ENST00000475488 TMEM110-MUSTN1A8MSY1 372 aa16.31■□□□□ 0.2
SSPO-205ENST00000475488 CCDC183Q5T5S1 534 aa16.31■□□□□ 0.2
SSPO-205ENST00000475488 DAAM2Q86T65 1068 aa16.31■□□□□ 0.2
SSPO-205ENST00000475488 MX1P20591 662 aa16.3■□□□□ 0.2
SSPO-205ENST00000475488 TPD52P55327 224 aaPredicted RBP16.3■□□□□ 0.2
SSPO-205ENST00000475488 ZGPATQ8N5A5 531 aaKnown RBP16.3■□□□□ 0.2
SSPO-205ENST00000475488 PLEKHH2Q8IVE3 1493 aa16.3■□□□□ 0.2
SSPO-205ENST00000475488 CALM1P0DP23 149 aa16.3■□□□□ 0.2
SSPO-205ENST00000475488 CALM2P0DP24 149 aa16.3■□□□□ 0.2
SSPO-205ENST00000475488 CALM3P0DP25 149 aa16.3■□□□□ 0.2
SSPO-205ENST00000475488 TERF1P54274 439 aa16.3■□□□□ 0.2
SSPO-205ENST00000475488 TCHPQ9BT92 498 aa16.3■□□□□ 0.2
SSPO-205ENST00000475488 VEZTQ9HBM0 779 aa16.3■□□□□ 0.2
SSPO-205ENST00000475488 CWC25Q9NXE8 425 aaPredicted RBP16.3■□□□□ 0.2
SSPO-205ENST00000475488 CLIP2Q9UDT6 1046 aa16.3■□□□□ 0.2
SSPO-205ENST00000475488 PPP4R3BQ5MIZ7 849 aa16.3■□□□□ 0.2
SSPO-205ENST00000475488 PRPF31Q8WWY3 499 aaKnown RBP16.3■□□□□ 0.2
SSPO-205ENST00000475488 SIRT1Q96EB6 747 aa16.3■□□□□ 0.2
SSPO-205ENST00000475488 PICALMQ13492 652 aa16.3■□□□□ 0.2
SSPO-205ENST00000475488 CKAP4Q07065 602 aaKnown RBP16.3■□□□□ 0.2
SSPO-205ENST00000475488 CCDC152Q4G0S7 254 aa16.3■□□□□ 0.2
SSPO-205ENST00000475488 CEP112Q8N8E3 955 aa16.3■□□□□ 0.2
SSPO-205ENST00000475488 SMC1BQ8NDV3 1235 aa16.3■□□□□ 0.2
SSPO-205ENST00000475488 SETDB2Q96T68 719 aa16.3■□□□□ 0.2
SSPO-205ENST00000475488 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.3■□□□□ 0.2
SSPO-205ENST00000475488 V9GYY5 206 aaPredicted RBP16.3■□□□□ 0.2
SSPO-205ENST00000475488 RBM26Q5T8P6 1007 aaKnown RBP16.3■□□□□ 0.2
SSPO-205ENST00000475488 ANAPC4Q9UJX5 808 aa16.3■□□□□ 0.2
SSPO-205ENST00000475488 GJC1P36383 396 aa16.29■□□□□ 0.2
SSPO-205ENST00000475488 TRAF1Q13077 416 aa16.29■□□□□ 0.2
SSPO-205ENST00000475488 HAUS7Q99871 368 aa16.29■□□□□ 0.2
SSPO-205ENST00000475488 KMT5BQ4FZB7 885 aa16.29■□□□□ 0.2
SSPO-205ENST00000475488 CFAP58Q5T655 872 aa16.29■□□□□ 0.2
SSPO-205ENST00000475488 SLC26A6Q9BXS9 759 aa16.29■□□□□ 0.2
SSPO-205ENST00000475488 KANK3Q6NY19 840 aa16.29■□□□□ 0.2
SSPO-205ENST00000475488 PROCA1Q8NCQ7 364 aaPredicted RBP16.29■□□□□ 0.2
SSPO-205ENST00000475488 STX8Q9UNK0 236 aa16.29■□□□□ 0.2
SSPO-205ENST00000475488 HSF2BPO75031 334 aa16.29■□□□□ 0.2
SSPO-205ENST00000475488 TEX13AQ9BXU3 409 aaPredicted RBP16.29■□□□□ 0.2
SSPO-205ENST00000475488 EEF2P13639 858 aaKnown RBP16.29■□□□□ 0.2
SSPO-205ENST00000475488 METAP2P50579 478 aaKnown RBP eCLIP16.29■□□□□ 0.2
SSPO-205ENST00000475488 CCDC14Q49A88 953 aa16.29■□□□□ 0.2
SSPO-205ENST00000475488 SELENOOQ9BVL4 669 aa16.29■□□□□ 0.2
SSPO-205ENST00000475488 SH2B1Q9NRF2 756 aaPredicted RBP16.29■□□□□ 0.2
SSPO-205ENST00000475488 RASAL2Q9UJF2 1139 aa16.29■□□□□ 0.2
SSPO-205ENST00000475488 FCHSD2O94868 740 aa16.28■□□□□ 0.2
SSPO-205ENST00000475488 IFIT1BQ5T764 474 aaKnown RBP16.28■□□□□ 0.2
SSPO-205ENST00000475488 FSIP1Q8NA03 581 aa16.28■□□□□ 0.2
SSPO-205ENST00000475488 RPAP2Q8IXW5 612 aaPredicted RBP16.28■□□□□ 0.2
SSPO-205ENST00000475488 TXNDC16Q9P2K2 825 aa16.28■□□□□ 0.2
SSPO-205ENST00000475488 ISM2Q6H9L7 571 aa16.28■□□□□ 0.2
SSPO-205ENST00000475488 LDHAL6AQ6ZMR3 332 aa16.28■□□□□ 0.2
SSPO-205ENST00000475488 PDCL2Q8N4E4 241 aa16.28■□□□□ 0.2
SSPO-205ENST00000475488 FBF1Q8TES7 1133 aa16.28■□□□□ 0.2
SSPO-205ENST00000475488 ZBTB3Q9H5J0 574 aa16.28■□□□□ 0.2
SSPO-205ENST00000475488 CEP83Q9Y592 693 aa16.28■□□□□ 0.2
SSPO-205ENST00000475488 DMRT2Q9Y5R5 561 aa16.28■□□□□ 0.2
SSPO-205ENST00000475488 GOLIM4O00461 696 aa16.28■□□□□ 0.2
SSPO-205ENST00000475488 HEATR3Q7Z4Q2 680 aa16.28■□□□□ 0.2
SSPO-205ENST00000475488 NAIPQ13075 1403 aa16.28■□□□□ 0.2
SSPO-205ENST00000475488 BEGAINQ9BUH8 593 aa16.28■□□□□ 0.2
SSPO-205ENST00000475488 MAK16Q9BXY0 300 aaKnown RBP16.28■□□□□ 0.2
SSPO-205ENST00000475488 SCAND2PQ9GZW5 306 aaPredicted RBP16.28■□□□□ 0.2
SSPO-205ENST00000475488 FAM13AO94988 1023 aa16.28■□□□□ 0.2
SSPO-205ENST00000475488 STAT6P42226 847 aa16.28■□□□□ 0.2
SSPO-205ENST00000475488 HECW1Q76N89 1606 aa16.27■□□□□ 0.2
SSPO-205ENST00000475488 CCDC50Q8IVM0 306 aa16.27■□□□□ 0.2
SSPO-205ENST00000475488 TRIM47Q96LD4 638 aa16.27■□□□□ 0.2
SSPO-205ENST00000475488 POLR3GO15318 223 aaPredicted RBP16.27■□□□□ 0.19
SSPO-205ENST00000475488 IARSP41252 1262 aaKnown RBP16.27■□□□□ 0.19
SSPO-205ENST00000475488 WWC3Q9ULE0 1092 aa16.27■□□□□ 0.19
SSPO-205ENST00000475488 MICU3Q86XE3 530 aa16.26■□□□□ 0.19
SSPO-205ENST00000475488 TMEM57Q8N5G2 664 aa16.26■□□□□ 0.19
SSPO-205ENST00000475488 TRMT1Q9NXH9 659 aaKnown RBP16.26■□□□□ 0.19
SSPO-205ENST00000475488 MAP3K2Q9Y2U5 619 aa16.26■□□□□ 0.19
SSPO-205ENST00000475488 PRG4Q92954 1404 aaPredicted RBP16.26■□□□□ 0.19
SSPO-205ENST00000475488 NSD3Q9BZ95 1437 aa16.26■□□□□ 0.19
SSPO-205ENST00000475488 POTEB2H3BUK9 544 aa16.26■□□□□ 0.19
SSPO-205ENST00000475488 SMARCC2Q8TAQ2 1214 aa16.26■□□□□ 0.19
SSPO-205ENST00000475488 RMND1Q9NWS8 449 aa16.26■□□□□ 0.19
SSPO-205ENST00000475488 CCDC160A6NGH7 325 aa16.26■□□□□ 0.19
SSPO-205ENST00000475488 C9orf84Q5VXU9 1444 aa16.26■□□□□ 0.19
SSPO-205ENST00000475488 PLEKHH1Q9ULM0 1364 aa16.26■□□□□ 0.19
SSPO-205ENST00000475488 CRCPO75575 148 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms