RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 RASSF10A6NK89 507 aa27.14■■□□□ 1.94
VPS36-203ENST00000475375 ERVV-1B6SEH8 477 aa27.14■■□□□ 1.94
VPS36-203ENST00000475375 GPTP24298 496 aa27.14■■□□□ 1.94
VPS36-203ENST00000475375 CC2D2BQ6DHV5 1058 aa27.14■■□□□ 1.94
VPS36-203ENST00000475375 ADAMTSL1Q8N6G6 1762 aa27.14■■□□□ 1.93
VPS36-203ENST00000475375 MAP3K15Q6ZN16 1313 aa27.14■■□□□ 1.93
VPS36-203ENST00000475375 MYL6BP14649 208 aa27.13■■□□□ 1.93
VPS36-203ENST00000475375 PNISRQ8TF01 805 aaKnown RBP27.13■■□□□ 1.93
VPS36-203ENST00000475375 LAMB4A4D0S4 1761 aa27.12■■□□□ 1.93
VPS36-203ENST00000475375 TCERG1O14776 1098 aaKnown RBP27.12■■□□□ 1.93
VPS36-203ENST00000475375 TTLL7Q6ZT98 887 aa27.12■■□□□ 1.93
VPS36-203ENST00000475375 LARGE2Q8N3Y3 721 aa27.12■■□□□ 1.93
VPS36-203ENST00000475375 ZBTB3Q9H5J0 574 aa27.12■■□□□ 1.93
VPS36-203ENST00000475375 WDR33Q9C0J8 1336 aaKnown RBP27.11■■□□□ 1.93
VPS36-203ENST00000475375 MAP2K1Q02750 393 aaPredicted RBP27.1■■□□□ 1.93
VPS36-203ENST00000475375 PAXIP1Q6ZW49 1069 aaPredicted RBP27.1■■□□□ 1.93
VPS36-203ENST00000475375 RBM17Q96I25 401 aaKnown RBP27.1■■□□□ 1.93
VPS36-203ENST00000475375 SNED1Q8TER0 1413 aa27.09■■□□□ 1.93
VPS36-203ENST00000475375 GRIPAP1Q4V328 841 aa27.09■■□□□ 1.93
VPS36-203ENST00000475375 DDX21Q9NR30 783 aaKnown RBP eCLIP27.09■■□□□ 1.93
VPS36-203ENST00000475375 PPEF1O14829 653 aaPredicted RBP27.08■■□□□ 1.93
VPS36-203ENST00000475375 HOXA10P31260 410 aaPredicted RBP27.08■■□□□ 1.93
VPS36-203ENST00000475375 SUSD4Q5VX71 490 aa27.08■■□□□ 1.93
VPS36-203ENST00000475375 UBN2Q6ZU65 1347 aa27.08■■□□□ 1.93
VPS36-203ENST00000475375 COL4A5P29400 1685 aa27.08■■□□□ 1.92
VPS36-203ENST00000475375 HSPA8P11142 646 aaKnown RBP27.07■■□□□ 1.92
VPS36-203ENST00000475375 EPS15P42566 896 aa27.07■■□□□ 1.92
VPS36-203ENST00000475375 EIF4A1P60842 406 aaKnown RBP27.07■■□□□ 1.92
VPS36-203ENST00000475375 GRM1Q13255 1194 aa27.07■■□□□ 1.92
VPS36-203ENST00000475375 NIM1KQ8IY84 436 aa27.07■■□□□ 1.92
VPS36-203ENST00000475375 TMX4Q9H1E5 349 aaPredicted RBP27.07■■□□□ 1.92
VPS36-203ENST00000475375 SCNN1DP51172 638 aa27.06■■□□□ 1.92
VPS36-203ENST00000475375 NUP98P52948 1817 aa27.06■■□□□ 1.92
VPS36-203ENST00000475375 IBTKQ9P2D0 1353 aaPredicted RBP27.06■■□□□ 1.92
VPS36-203ENST00000475375 FMR1Q06787 632 aaKnown RBP eCLIP27.05■■□□□ 1.92
VPS36-203ENST00000475375 SLC51AQ86UW1 340 aa27.05■■□□□ 1.92
VPS36-203ENST00000475375 CRAMP1Q96RY5 1269 aa27.05■■□□□ 1.92
VPS36-203ENST00000475375 THUMPD2Q9BTF0 503 aaKnown RBP27.05■■□□□ 1.92
VPS36-203ENST00000475375 RIC1Q4ADV7 1423 aa27.04■■□□□ 1.92
VPS36-203ENST00000475375 PPIP5K2O43314 1243 aa27.03■■□□□ 1.92
VPS36-203ENST00000475375 KDM3BQ7LBC6 1761 aa27.03■■□□□ 1.92
VPS36-203ENST00000475375 PPP1R42Q7Z4L9 355 aa27.03■■□□□ 1.92
VPS36-203ENST00000475375 CAPNS2Q96L46 248 aa27.03■■□□□ 1.92
VPS36-203ENST00000475375 BEGAINQ9BUH8 593 aa27.03■■□□□ 1.92
VPS36-203ENST00000475375 LTBP1Q14766 1721 aa27.02■■□□□ 1.92
VPS36-203ENST00000475375 NTSR2O95665 410 aa27.02■■□□□ 1.92
VPS36-203ENST00000475375 ECE1P42892 770 aa27.02■■□□□ 1.92
VPS36-203ENST00000475375 C3orf67Q6ZVT6 689 aa27.02■■□□□ 1.92
VPS36-203ENST00000475375 USP50Q70EL3 339 aaPredicted RBP27.02■■□□□ 1.92
VPS36-203ENST00000475375 ZNF34Q8IZ26 560 aa27.02■■□□□ 1.92
VPS36-203ENST00000475375 TRAF5O00463 557 aa27.01■■□□□ 1.91
VPS36-203ENST00000475375 NFE2L2Q16236 605 aa27.01■■□□□ 1.91
VPS36-203ENST00000475375 AOC3Q16853 763 aa27.01■■□□□ 1.91
VPS36-203ENST00000475375 GIGYF2Q6Y7W6 1299 aaKnown RBP27.01■■□□□ 1.91
VPS36-203ENST00000475375 NLRP3Q96P20 1036 aa27.01■■□□□ 1.91
VPS36-203ENST00000475375 PARP10Q53GL7 1025 aa27■■□□□ 1.91
VPS36-203ENST00000475375 ABHD8Q96I13 439 aa27■■□□□ 1.91
VPS36-203ENST00000475375 DLG5Q8TDM6 1919 aa27■■□□□ 1.91
VPS36-203ENST00000475375 MAPK8IP3Q9UPT6 1336 aa26.99■■□□□ 1.91
VPS36-203ENST00000475375 CYP4F22Q6NT55 531 aa26.99■■□□□ 1.91
VPS36-203ENST00000475375 GPR101Q96P66 508 aaPredicted RBP26.99■■□□□ 1.91
VPS36-203ENST00000475375 ERBB4Q15303 1308 aa26.97■■□□□ 1.91
VPS36-203ENST00000475375 PLEKHF1Q96S99 279 aa26.97■■□□□ 1.91
VPS36-203ENST00000475375 UTP14AQ9BVJ6 771 aaKnown RBP26.97■■□□□ 1.91
VPS36-203ENST00000475375 GPRC5DQ9NZD1 345 aa26.97■■□□□ 1.91
VPS36-203ENST00000475375 ATP6V0A2Q9Y487 856 aa26.97■■□□□ 1.91
VPS36-203ENST00000475375 EIF2S2P20042 333 aaKnown RBP26.96■■□□□ 1.91
VPS36-203ENST00000475375 CST9Q5W186 159 aa26.96■■□□□ 1.91
VPS36-203ENST00000475375 SUPT20HQ8NEM7 779 aa26.96■■□□□ 1.91
VPS36-203ENST00000475375 ADARB2Q9NS39 739 aaKnown RBP26.96■■□□□ 1.91
VPS36-203ENST00000475375 TSPYL4Q9UJ04 414 aa26.96■■□□□ 1.91
VPS36-203ENST00000475375 VPS33BQ9H267 617 aa26.95■■□□□ 1.9
VPS36-203ENST00000475375 PNNQ9H307 717 aaKnown RBP26.95■■□□□ 1.9
VPS36-203ENST00000475375 ZNRF3Q9ULT6 936 aa26.95■■□□□ 1.9
VPS36-203ENST00000475375 TLL2Q9Y6L7 1015 aa26.94■■□□□ 1.9
VPS36-203ENST00000475375 ABCC4O15439 1325 aa26.93■■□□□ 1.9
VPS36-203ENST00000475375 CXCL9Q07325 125 aa26.93■■□□□ 1.9
VPS36-203ENST00000475375 DPP8Q6V1X1 898 aaPredicted RBP26.93■■□□□ 1.9
VPS36-203ENST00000475375 GMPSP49915 693 aaPredicted RBP26.92■■□□□ 1.9
VPS36-203ENST00000475375 AOC2O75106 756 aa26.91■■□□□ 1.9
VPS36-203ENST00000475375 CELF2O95319 508 aaKnown RBP26.91■■□□□ 1.9
VPS36-203ENST00000475375 ANXA1P04083 346 aa26.91■■□□□ 1.9
VPS36-203ENST00000475375 SLC10A5Q5PT55 438 aa26.91■■□□□ 1.9
VPS36-203ENST00000475375 BCL2L13Q9BXK5 485 aa26.91■■□□□ 1.9
VPS36-203ENST00000475375 TSKSQ9UJT2 592 aa26.91■■□□□ 1.9
VPS36-203ENST00000475375 TRPM7Q96QT4 1865 aa26.91■■□□□ 1.9
VPS36-203ENST00000475375 CCDC85CA6NKD9 419 aa26.9■■□□□ 1.9
VPS36-203ENST00000475375 PDIA6Q15084 440 aa26.9■■□□□ 1.9
VPS36-203ENST00000475375 FAM161AQ3B820 660 aa26.9■■□□□ 1.9
VPS36-203ENST00000475375 MPNDQ8N594 471 aa26.9■■□□□ 1.9
VPS36-203ENST00000475375 THSD7BQ9C0I4 1608 aa26.9■■□□□ 1.9
VPS36-203ENST00000475375 BBOX1O75936 387 aa26.89■■□□□ 1.9
VPS36-203ENST00000475375 HCLS1P14317 486 aaPredicted RBP26.89■■□□□ 1.9
VPS36-203ENST00000475375 PROSER3Q2NL68 480 aa26.89■■□□□ 1.9
VPS36-203ENST00000475375 CIAPIN1Q6FI81 312 aa26.89■■□□□ 1.9
VPS36-203ENST00000475375 RTFDC1Q9BY42 306 aaPredicted RBP26.89■■□□□ 1.9
VPS36-203ENST00000475375 GLIS2Q9BZE0 524 aaPredicted RBP26.89■■□□□ 1.9
VPS36-203ENST00000475375 ZNF408Q9H9D4 720 aa26.89■■□□□ 1.9
VPS36-203ENST00000475375 RAD17O75943 681 aa26.88■■□□□ 1.89
VPS36-203ENST00000475375 MAP2K2P36507 400 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms