RNA–Protein interactions for RNA: ENST00000475335.5

SIKE1-208, Transcript of suppressor of IKBKE 1, humanhuman

TSL 2

Gene SIKE1, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIKE1-208ENST00000475335 GTF2E1P29083 439 aaPredicted RBP27.14■■□□□ 1.94
SIKE1-208ENST00000475335 RASSF7Q02833 373 aa27.14■■□□□ 1.94
SIKE1-208ENST00000475335 C3orf67Q6ZVT6 689 aa27.14■■□□□ 1.94
SIKE1-208ENST00000475335 ISCA1Q9BUE6 129 aa27.14■■□□□ 1.94
SIKE1-208ENST00000475335 C9orf131Q5VYM1 1079 aa27.13■■□□□ 1.93
SIKE1-208ENST00000475335 C7orf43Q8WVR3 580 aa27.13■■□□□ 1.93
SIKE1-208ENST00000475335 UTP14AQ9BVJ6 771 aaKnown RBP27.13■■□□□ 1.93
SIKE1-208ENST00000475335 C21orf2O43822 256 aa27.12■■□□□ 1.93
SIKE1-208ENST00000475335 CACNA1SQ13698 1873 aa27.11■■□□□ 1.93
SIKE1-208ENST00000475335 SLC10A5Q5PT55 438 aa27.11■■□□□ 1.93
SIKE1-208ENST00000475335 CHMP4AQ9BY43 222 aa27.11■■□□□ 1.93
SIKE1-208ENST00000475335 SBF1O95248 1867 aa27.1■■□□□ 1.93
SIKE1-208ENST00000475335 SYNE4Q8N205 404 aa27.1■■□□□ 1.93
SIKE1-208ENST00000475335 FER1L6Q2WGJ9 1857 aa27.1■■□□□ 1.93
SIKE1-208ENST00000475335 SNED1Q8TER0 1413 aa27.09■■□□□ 1.93
SIKE1-208ENST00000475335 HOXA10P31260 410 aaPredicted RBP27.09■■□□□ 1.93
SIKE1-208ENST00000475335 EXOSC9Q06265 439 aaKnown RBP27.09■■□□□ 1.93
SIKE1-208ENST00000475335 GOLGA2Q08379 1002 aa27.09■■□□□ 1.93
SIKE1-208ENST00000475335 TRIM28Q13263 835 aaKnown RBP27.09■■□□□ 1.93
SIKE1-208ENST00000475335 ZNF219Q9P2Y4 722 aaPredicted RBP27.09■■□□□ 1.93
SIKE1-208ENST00000475335 ATP5J2-PTCD1G3V325 749 aa27.08■■□□□ 1.93
SIKE1-208ENST00000475335 TCERG1O14776 1098 aaKnown RBP27.08■■□□□ 1.93
SIKE1-208ENST00000475335 RNF181Q9P0P0 153 aa27.08■■□□□ 1.93
SIKE1-208ENST00000475335 VAMP4O75379 141 aa27.07■■□□□ 1.92
SIKE1-208ENST00000475335 LTBP3Q9NS15 1303 aa27.07■■□□□ 1.92
SIKE1-208ENST00000475335 MYH16Q9H6N6 1097 aa27.06■■□□□ 1.92
SIKE1-208ENST00000475335 TRMT112Q9UI30 125 aaKnown RBP27.06■■□□□ 1.92
SIKE1-208ENST00000475335 SH3TC1Q8TE82 1336 aa27.06■■□□□ 1.92
SIKE1-208ENST00000475335 LAMB2P55268 1798 aa27.05■■□□□ 1.92
SIKE1-208ENST00000475335 LMNB1P20700 586 aa27.05■■□□□ 1.92
SIKE1-208ENST00000475335 G2E3Q7L622 706 aa27.05■■□□□ 1.92
SIKE1-208ENST00000475335 RIC3Q7Z5B4 369 aa27.05■■□□□ 1.92
SIKE1-208ENST00000475335 ZNF428Q96B54 188 aa27.05■■□□□ 1.92
SIKE1-208ENST00000475335 STK31Q9BXU1 1019 aa27.05■■□□□ 1.92
SIKE1-208ENST00000475335 DDX60Q8IY21 1712 aaKnown RBP27.04■■□□□ 1.92
SIKE1-208ENST00000475335 HCLS1P14317 486 aaPredicted RBP27.04■■□□□ 1.92
SIKE1-208ENST00000475335 OLFM4Q6UX06 510 aa27.04■■□□□ 1.92
SIKE1-208ENST00000475335 ALDH1B1P30837 517 aa27.03■■□□□ 1.92
SIKE1-208ENST00000475335 SOGA3Q5TF21 947 aa27.03■■□□□ 1.92
SIKE1-208ENST00000475335 DIEXFQ68CQ4 756 aaKnown RBP27.03■■□□□ 1.92
SIKE1-208ENST00000475335 SLC51AQ86UW1 340 aa27.03■■□□□ 1.92
SIKE1-208ENST00000475335 ZNF526Q8TF50 670 aaPredicted RBP27.03■■□□□ 1.92
SIKE1-208ENST00000475335 RPGRQ92834 1020 aaKnown RBP27.02■■□□□ 1.92
SIKE1-208ENST00000475335 NLRP3Q96P20 1036 aa27.02■■□□□ 1.92
SIKE1-208ENST00000475335 CRAMP1Q96RY5 1269 aa27.02■■□□□ 1.92
SIKE1-208ENST00000475335 METTL22Q9BUU2 404 aaPredicted RBP27.02■■□□□ 1.92
SIKE1-208ENST00000475335 TIAM2Q8IVF5 1701 aa27.02■■□□□ 1.92
SIKE1-208ENST00000475335 ZC3H4Q9UPT8 1303 aaKnown RBP27.01■■□□□ 1.91
SIKE1-208ENST00000475335 DDX58O95786 925 aaKnown RBP27.01■■□□□ 1.91
SIKE1-208ENST00000475335 SLC4A2P04920 1241 aa27.01■■□□□ 1.91
SIKE1-208ENST00000475335 CCDC93Q567U6 631 aa27.01■■□□□ 1.91
SIKE1-208ENST00000475335 FAM89AQ96GI7 184 aa27.01■■□□□ 1.91
SIKE1-208ENST00000475335 MYD88Q99836 296 aa27.01■■□□□ 1.91
SIKE1-208ENST00000475335 TAOK3Q9H2K8 898 aa27.01■■□□□ 1.91
SIKE1-208ENST00000475335 GPBP1L1Q9HC44 474 aaPredicted RBP27.01■■□□□ 1.91
SIKE1-208ENST00000475335 MAP3K2Q9Y2U5 619 aa27.01■■□□□ 1.91
SIKE1-208ENST00000475335 PI4KAP2A4QPH2 592 aa27■■□□□ 1.91
SIKE1-208ENST00000475335 KSR2Q6VAB6 950 aa27■■□□□ 1.91
SIKE1-208ENST00000475335 MIER1Q8N108 512 aa27■■□□□ 1.91
SIKE1-208ENST00000475335 PI4KAP1Q8N8J0 262 aa27■■□□□ 1.91
SIKE1-208ENST00000475335 RBM17Q96I25 401 aaKnown RBP26.99■■□□□ 1.91
SIKE1-208ENST00000475335 ABCC4O15439 1325 aa26.98■■□□□ 1.91
SIKE1-208ENST00000475335 IGKV5-2P06315 115 aa26.98■■□□□ 1.91
SIKE1-208ENST00000475335 FLIIQ13045 1269 aa26.98■■□□□ 1.91
SIKE1-208ENST00000475335 CCDC191Q8NCU4 936 aa26.97■■□□□ 1.91
SIKE1-208ENST00000475335 COL4A1P02462 1669 aa26.96■■□□□ 1.91
SIKE1-208ENST00000475335 FKBP4Q02790 459 aaKnown RBP eCLIP26.96■■□□□ 1.91
SIKE1-208ENST00000475335 ZBTB38Q8NAP3 1195 aaPredicted RBP26.96■■□□□ 1.91
SIKE1-208ENST00000475335 E9PSI1 815 aa26.95■■□□□ 1.9
SIKE1-208ENST00000475335 KIF3CO14782 793 aa26.95■■□□□ 1.9
SIKE1-208ENST00000475335 PPEF1O14829 653 aaPredicted RBP26.95■■□□□ 1.9
SIKE1-208ENST00000475335 SLFN5Q08AF3 891 aa26.95■■□□□ 1.9
SIKE1-208ENST00000475335 DICER1Q9UPY3 1922 aaKnown RBP26.94■■□□□ 1.9
SIKE1-208ENST00000475335 CCDC88AQ3V6T2 1871 aa26.94■■□□□ 1.9
SIKE1-208ENST00000475335 PCCAP05165 728 aaPredicted RBP26.94■■□□□ 1.9
SIKE1-208ENST00000475335 RTKN2Q8IZC4 609 aa26.94■■□□□ 1.9
SIKE1-208ENST00000475335 CWC25Q9NXE8 425 aaPredicted RBP26.94■■□□□ 1.9
SIKE1-208ENST00000475335 CACNA1FO60840 1977 aa26.93■■□□□ 1.9
SIKE1-208ENST00000475335 IRS4O14654 1257 aaPredicted RBP26.93■■□□□ 1.9
SIKE1-208ENST00000475335 SF3B3Q15393 1217 aaKnown RBP26.93■■□□□ 1.9
SIKE1-208ENST00000475335 RTL5Q5HYW3 569 aaPredicted RBP26.93■■□□□ 1.9
SIKE1-208ENST00000475335 CC2D2BQ6DHV5 1058 aa26.92■■□□□ 1.9
SIKE1-208ENST00000475335 CDCA7LQ96GN5 454 aa26.92■■□□□ 1.9
SIKE1-208ENST00000475335 PSMD1Q99460 953 aa26.92■■□□□ 1.9
SIKE1-208ENST00000475335 NMRK2Q9NPI5 230 aa26.92■■□□□ 1.9
SIKE1-208ENST00000475335 NEURL1BA8MQ27 555 aa26.91■■□□□ 1.9
SIKE1-208ENST00000475335 TRMT2AQ8IZ69 625 aaKnown RBP26.91■■□□□ 1.9
SIKE1-208ENST00000475335 ZNF277Q9NRM2 450 aaPredicted RBP26.91■■□□□ 1.9
SIKE1-208ENST00000475335 COL4A5P29400 1685 aa26.9■■□□□ 1.9
SIKE1-208ENST00000475335 C1QTNF8P60827 252 aa26.9■■□□□ 1.9
SIKE1-208ENST00000475335 FKBP5Q13451 457 aaPredicted RBP26.9■■□□□ 1.9
SIKE1-208ENST00000475335 GRAPQ13588 217 aa26.9■■□□□ 1.9
SIKE1-208ENST00000475335 CWF19L2Q2TBE0 894 aaKnown RBP26.9■■□□□ 1.9
SIKE1-208ENST00000475335 GRAPLQ8TC17 118 aaPredicted RBP26.9■■□□□ 1.9
SIKE1-208ENST00000475335 ATP6V0A2Q9Y487 856 aa26.9■■□□□ 1.9
SIKE1-208ENST00000475335 LRRC37AA6NMS7 1700 aa26.9■■□□□ 1.9
SIKE1-208ENST00000475335 DDX46Q7L014 1031 aaKnown RBP26.89■■□□□ 1.9
SIKE1-208ENST00000475335 JARID2Q92833 1246 aaPredicted RBP26.89■■□□□ 1.9
SIKE1-208ENST00000475335 CDHR2Q9BYE9 1310 aa26.89■■□□□ 1.89
SIKE1-208ENST00000475335 DNAAF4Q8WXU2 420 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms