RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 IDI1Q13907 227 aa12.64□□□□□ -0.39
VAPB-204ENST00000475243 SPECC1Q5M775 1068 aa12.64□□□□□ -0.39
VAPB-204ENST00000475243 PDE4BQ07343 736 aa12.64□□□□□ -0.39
VAPB-204ENST00000475243 ECHDC1Q9NTX5 307 aa12.64□□□□□ -0.39
VAPB-204ENST00000475243 CAMSAP2Q08AD1 1489 aa12.64□□□□□ -0.39
VAPB-204ENST00000475243 STX6O43752 255 aa12.64□□□□□ -0.39
VAPB-204ENST00000475243 HOOK3Q86VS8 718 aa12.64□□□□□ -0.39
VAPB-204ENST00000475243 EHMT1Q9H9B1 1298 aa12.64□□□□□ -0.39
VAPB-204ENST00000475243 ORC3Q9UBD5 711 aaPredicted RBP12.64□□□□□ -0.39
VAPB-204ENST00000475243 BAG3O95817 575 aa12.64□□□□□ -0.39
VAPB-204ENST00000475243 NECAB1Q8N987 351 aa12.64□□□□□ -0.39
VAPB-204ENST00000475243 NEK1Q96PY6 1258 aa12.64□□□□□ -0.39
VAPB-204ENST00000475243 PCF11O94913 1555 aaKnown RBP12.64□□□□□ -0.39
VAPB-204ENST00000475243 UBA7P41226 1012 aa12.64□□□□□ -0.39
VAPB-204ENST00000475243 CCDC141Q6ZP82 1450 aa12.64□□□□□ -0.39
VAPB-204ENST00000475243 GRM1Q13255 1194 aa12.63□□□□□ -0.39
VAPB-204ENST00000475243 TTF1Q15361 905 aaPredicted RBP12.63□□□□□ -0.39
VAPB-204ENST00000475243 MAP9Q49MG5 647 aa12.63□□□□□ -0.39
VAPB-204ENST00000475243 YEATS4O95619 227 aa12.63□□□□□ -0.39
VAPB-204ENST00000475243 KIF5BP33176 963 aa12.63□□□□□ -0.39
VAPB-204ENST00000475243 DRC1Q96MC2 740 aa12.63□□□□□ -0.39
VAPB-204ENST00000475243 CTAGE5O15320 804 aa12.63□□□□□ -0.39
VAPB-204ENST00000475243 MYO1BO43795 1136 aa12.63□□□□□ -0.39
VAPB-204ENST00000475243 ANKRD24Q8TF21 1146 aa12.63□□□□□ -0.39
VAPB-204ENST00000475243 MBIPQ9NS73 344 aa12.63□□□□□ -0.39
VAPB-204ENST00000475243 ZSWIM4Q9H7M6 989 aa12.63□□□□□ -0.39
VAPB-204ENST00000475243 IFNL2Q8IZJ0 200 aa12.62□□□□□ -0.39
VAPB-204ENST00000475243 ADCY5O95622 1261 aa12.62□□□□□ -0.39
VAPB-204ENST00000475243 GBP3Q9H0R5 595 aa12.62□□□□□ -0.39
VAPB-204ENST00000475243 COMMD10Q9Y6G5 202 aa12.62□□□□□ -0.39
VAPB-204ENST00000475243 CA8P35219 290 aa12.62□□□□□ -0.39
VAPB-204ENST00000475243 AFMP43652 599 aa12.62□□□□□ -0.39
VAPB-204ENST00000475243 BICD1Q96G01 975 aa12.62□□□□□ -0.39
VAPB-204ENST00000475243 TCEANC2Q96MN5 208 aa12.62□□□□□ -0.39
VAPB-204ENST00000475243 CABP5Q9NP86 173 aa12.62□□□□□ -0.39
VAPB-204ENST00000475243 AMPD3Q01432 767 aa12.62□□□□□ -0.39
VAPB-204ENST00000475243 CETN1Q12798 172 aa12.62□□□□□ -0.39
VAPB-204ENST00000475243 CHPF2Q9P2E5 772 aa12.62□□□□□ -0.39
VAPB-204ENST00000475243 NBPF6Q5VWK0 638 aa12.61□□□□□ -0.39
VAPB-204ENST00000475243 NBPF5PQ86XG9 351 aaPredicted RBP12.61□□□□□ -0.39
VAPB-204ENST00000475243 NCOA7Q8NI08 942 aa12.61□□□□□ -0.39
VAPB-204ENST00000475243 NBPF4Q96M43 638 aa12.61□□□□□ -0.39
VAPB-204ENST00000475243 ABCC11Q96J66 1382 aa12.61□□□□□ -0.39
VAPB-204ENST00000475243 SHTN1A0MZ66 631 aa12.61□□□□□ -0.39
VAPB-204ENST00000475243 HLA-DOAP06340 250 aa12.61□□□□□ -0.39
VAPB-204ENST00000475243 IGHDP01880 384 aa12.61□□□□□ -0.39
VAPB-204ENST00000475243 RNF187Q5TA31 235 aaPredicted RBP12.61□□□□□ -0.39
VAPB-204ENST00000475243 MAGI1Q96QZ7 1491 aaPredicted RBP12.61□□□□□ -0.39
VAPB-204ENST00000475243 SLC39A6Q13433 755 aa12.61□□□□□ -0.39
VAPB-204ENST00000475243 IQGAP2Q13576 1575 aa12.61□□□□□ -0.39
VAPB-204ENST00000475243 STX1AQ16623 288 aa12.61□□□□□ -0.39
VAPB-204ENST00000475243 GIMAP6Q6P9H5 292 aa12.61□□□□□ -0.39
VAPB-204ENST00000475243 JADE2Q9NQC1 790 aa12.61□□□□□ -0.39
VAPB-204ENST00000475243 TSPY3P0CV98 308 aa12.61□□□□□ -0.39
VAPB-204ENST00000475243 TSPY8P0CW00 308 aa12.61□□□□□ -0.39
VAPB-204ENST00000475243 ANKRD13DQ6ZTN6 518 aa12.61□□□□□ -0.39
VAPB-204ENST00000475243 PLEKHH1Q9ULM0 1364 aa12.6□□□□□ -0.39
VAPB-204ENST00000475243 PICALMQ13492 652 aa12.6□□□□□ -0.39
VAPB-204ENST00000475243 CCDC12Q8WUD4 166 aaPredicted RBP12.6□□□□□ -0.39
VAPB-204ENST00000475243 IFIT1BQ5T764 474 aaKnown RBP12.6□□□□□ -0.39
VAPB-204ENST00000475243 ADGRL1O94910 1474 aa12.6□□□□□ -0.39
VAPB-204ENST00000475243 ST5P78524 1137 aa12.6□□□□□ -0.39
VAPB-204ENST00000475243 TRERF1Q96PN7 1200 aa12.6□□□□□ -0.39
VAPB-204ENST00000475243 ACEP12821 1306 aa12.6□□□□□ -0.39
VAPB-204ENST00000475243 KIF2AO00139 706 aaPredicted RBP12.6□□□□□ -0.39
VAPB-204ENST00000475243 ZBTB9Q96C00 473 aa12.6□□□□□ -0.39
VAPB-204ENST00000475243 INCENPQ9NQS7 918 aa12.6□□□□□ -0.39
VAPB-204ENST00000475243 SNRPA1P09661 255 aaKnown RBP12.59□□□□□ -0.39
VAPB-204ENST00000475243 CYP7A1P22680 504 aa12.59□□□□□ -0.39
VAPB-204ENST00000475243 WTAPQ15007 396 aa12.59□□□□□ -0.39
VAPB-204ENST00000475243 HEATR3Q7Z4Q2 680 aa12.59□□□□□ -0.39
VAPB-204ENST00000475243 ABCC5O15440 1437 aa12.59□□□□□ -0.39
VAPB-204ENST00000475243 KIF20AO95235 890 aa12.59□□□□□ -0.39
VAPB-204ENST00000475243 ATP6V1AP38606 617 aa12.59□□□□□ -0.39
VAPB-204ENST00000475243 ZNF165P49910 485 aa12.59□□□□□ -0.39
VAPB-204ENST00000475243 CRNKL1Q9BZJ0 848 aaKnown RBP12.59□□□□□ -0.39
VAPB-204ENST00000475243 NOS1P29475 1434 aa12.59□□□□□ -0.39
VAPB-204ENST00000475243 LRPPRCP42704 1394 aaKnown RBP12.59□□□□□ -0.39
VAPB-204ENST00000475243 KLF18A0A0U1RQI7 1052 aa12.59□□□□□ -0.39
VAPB-204ENST00000475243 GCOM1H8Y6P7 765 aaPredicted RBP12.59□□□□□ -0.39
VAPB-204ENST00000475243 LDHCP07864 332 aa12.59□□□□□ -0.39
VAPB-204ENST00000475243 MYZAPP0CAP1 466 aa12.59□□□□□ -0.39
VAPB-204ENST00000475243 MCM5P33992 734 aa12.59□□□□□ -0.39
VAPB-204ENST00000475243 PLB1Q6P1J6 1458 aa12.59□□□□□ -0.39
VAPB-204ENST00000475243 CCDC152Q4G0S7 254 aa12.59□□□□□ -0.39
VAPB-204ENST00000475243 NF2P35240 595 aa12.58□□□□□ -0.39
VAPB-204ENST00000475243 DDX19AQ9NUU7 478 aaKnown RBP12.58□□□□□ -0.39
VAPB-204ENST00000475243 EXOC1Q9NV70 894 aa12.58□□□□□ -0.39
VAPB-204ENST00000475243 HMGB2P26583 209 aaKnown RBP12.58□□□□□ -0.4
VAPB-204ENST00000475243 TRIM47Q96LD4 638 aa12.58□□□□□ -0.4
VAPB-204ENST00000475243 SETDB2Q96T68 719 aa12.58□□□□□ -0.4
VAPB-204ENST00000475243 SLC4A4Q9Y6R1 1079 aa12.58□□□□□ -0.4
VAPB-204ENST00000475243 CHST3Q7LGC8 479 aa12.58□□□□□ -0.4
VAPB-204ENST00000475243 ALS2CR12Q96Q35 445 aa12.58□□□□□ -0.4
VAPB-204ENST00000475243 MEIS3Q99687 375 aa12.58□□□□□ -0.4
VAPB-204ENST00000475243 SERPINA10Q9UK55 444 aa12.58□□□□□ -0.4
VAPB-204ENST00000475243 MCM3P25205 808 aa12.58□□□□□ -0.4
VAPB-204ENST00000475243 LMAN1P49257 510 aa12.58□□□□□ -0.4
VAPB-204ENST00000475243 TTC22Q5TAA0 569 aa12.58□□□□□ -0.4
VAPB-204ENST00000475243 CCDC102BQ68D86 513 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms