RNA–Protein interactions for RNA: ENST00000475027.5

SH3YL1-220, Transcript of SH3 and SYLF domain containing 1, humanhuman

TSL 5

Gene SH3YL1, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3YL1-220ENST00000475027 WDR43Q15061 677 aaKnown RBP eCLIP16.2■□□□□ 0.18
SH3YL1-220ENST00000475027 RUNDC1Q96C34 613 aa16.2■□□□□ 0.18
SH3YL1-220ENST00000475027 BABAM1Q9NWV8 329 aa16.2■□□□□ 0.18
SH3YL1-220ENST00000475027 ZNF541Q9H0D2 1346 aa16.19■□□□□ 0.18
SH3YL1-220ENST00000475027 NPHP1O15259 732 aa16.19■□□□□ 0.18
SH3YL1-220ENST00000475027 POTEIP0CG38 1075 aa16.19■□□□□ 0.18
SH3YL1-220ENST00000475027 POTEJP0CG39 1038 aa16.19■□□□□ 0.18
SH3YL1-220ENST00000475027 HNRNPUQ00839 825 aaKnown RBP eCLIP16.19■□□□□ 0.18
SH3YL1-220ENST00000475027 NEUROD2Q15784 382 aa16.19■□□□□ 0.18
SH3YL1-220ENST00000475027 DDNO94850 711 aaPredicted RBP16.18■□□□□ 0.18
SH3YL1-220ENST00000475027 EIF2S2P20042 333 aaKnown RBP16.18■□□□□ 0.18
SH3YL1-220ENST00000475027 HOXA10P31260 410 aaPredicted RBP16.18■□□□□ 0.18
SH3YL1-220ENST00000475027 CCDC93Q567U6 631 aa16.18■□□□□ 0.18
SH3YL1-220ENST00000475027 KIF6Q6ZMV9 814 aa16.18■□□□□ 0.18
SH3YL1-220ENST00000475027 NECTIN2Q92692 538 aa16.18■□□□□ 0.18
SH3YL1-220ENST00000475027 LRRC37AA6NMS7 1700 aa16.18■□□□□ 0.18
SH3YL1-220ENST00000475027 VEGFAP15692 232 aaPredicted RBP16.17■□□□□ 0.18
SH3YL1-220ENST00000475027 FKBP4Q02790 459 aaKnown RBP eCLIP16.17■□□□□ 0.181e-6■■■□□ 17
SH3YL1-220ENST00000475027 ZNF277Q9NRM2 450 aaPredicted RBP16.17■□□□□ 0.18
SH3YL1-220ENST00000475027 DUOX1Q9NRD9 1551 aa16.17■□□□□ 0.18
SH3YL1-220ENST00000475027 LMOD3Q0VAK6 560 aa16.16■□□□□ 0.18
SH3YL1-220ENST00000475027 SOGA3Q5TF21 947 aa16.16■□□□□ 0.18
SH3YL1-220ENST00000475027 C16orf71Q8IYS4 520 aaPredicted RBP16.16■□□□□ 0.18
SH3YL1-220ENST00000475027 SYNE4Q8N205 404 aa16.16■□□□□ 0.18
SH3YL1-220ENST00000475027 SMC1BQ8NDV3 1235 aa16.16■□□□□ 0.18
SH3YL1-220ENST00000475027 XAGE3Q8WTP9 111 aa16.16■□□□□ 0.18
SH3YL1-220ENST00000475027 ZNF853P0CG23 659 aa16.15■□□□□ 0.18
SH3YL1-220ENST00000475027 COPS6Q7L5N1 327 aa16.15■□□□□ 0.18
SH3YL1-220ENST00000475027 NYXQ9GZU5 481 aa16.15■□□□□ 0.18
SH3YL1-220ENST00000475027 L3MBTL3Q96JM7 780 aaPredicted RBP16.14■□□□□ 0.17
SH3YL1-220ENST00000475027 SLC10A5Q5PT55 438 aa16.13■□□□□ 0.17
SH3YL1-220ENST00000475027 NLRP10Q86W26 655 aa16.13■□□□□ 0.17
SH3YL1-220ENST00000475027 KLRG1Q96E93 195 aa16.13■□□□□ 0.17
SH3YL1-220ENST00000475027 DDX21Q9NR30 783 aaKnown RBP eCLIP16.13■□□□□ 0.17
SH3YL1-220ENST00000475027 MBIPQ9NS73 344 aa16.13■□□□□ 0.17
SH3YL1-220ENST00000475027 CHPF2Q9P2E5 772 aa16.13■□□□□ 0.17
SH3YL1-220ENST00000475027 FZD9O00144 591 aa16.12■□□□□ 0.17
SH3YL1-220ENST00000475027 ALDH1B1P30837 517 aa16.12■□□□□ 0.17
SH3YL1-220ENST00000475027 IARSP41252 1262 aaKnown RBP16.12■□□□□ 0.17
SH3YL1-220ENST00000475027 PARP10Q53GL7 1025 aa16.12■□□□□ 0.17
SH3YL1-220ENST00000475027 JMYQ8N9B5 988 aa16.12■□□□□ 0.17
SH3YL1-220ENST00000475027 CRAMP1Q96RY5 1269 aa16.12■□□□□ 0.17
SH3YL1-220ENST00000475027 PSMD1Q99460 953 aa16.12■□□□□ 0.17
SH3YL1-220ENST00000475027 GTF2E1P29083 439 aaPredicted RBP16.11■□□□□ 0.17
SH3YL1-220ENST00000475027 AIMP1Q12904 312 aaKnown RBP16.11■□□□□ 0.17
SH3YL1-220ENST00000475027 DPY19L2Q6NUT2 758 aa16.11■□□□□ 0.17
SH3YL1-220ENST00000475027 ZNF428Q96B54 188 aa16.11■□□□□ 0.17
SH3YL1-220ENST00000475027 CFAP44Q96MT7 982 aa16.11■□□□□ 0.17
SH3YL1-220ENST00000475027 ABCC4O15439 1325 aa16.11■□□□□ 0.17
SH3YL1-220ENST00000475027 APAF1O14727 1248 aa16.1■□□□□ 0.17
SH3YL1-220ENST00000475027 TCIRG1Q13488 830 aa16.1■□□□□ 0.17
SH3YL1-220ENST00000475027 RTKN2Q8IZC4 609 aa16.1■□□□□ 0.17
SH3YL1-220ENST00000475027 LAS1LQ9Y4W2 734 aaKnown RBP16.1■□□□□ 0.17
SH3YL1-220ENST00000475027 ZBED9Q6R2W3 1325 aa16.1■□□□□ 0.17
SH3YL1-220ENST00000475027 HOXB7P09629 217 aa16.09■□□□□ 0.17
SH3YL1-220ENST00000475027 DUSP27Q5VZP5 1158 aa16.09■□□□□ 0.17
SH3YL1-220ENST00000475027 PPP1R42Q7Z4L9 355 aa16.09■□□□□ 0.17
SH3YL1-220ENST00000475027 RPGRQ92834 1020 aaKnown RBP16.09■□□□□ 0.17
SH3YL1-220ENST00000475027 UTP14AQ9BVJ6 771 aaKnown RBP16.09■□□□□ 0.17
SH3YL1-220ENST00000475027 TAF1DQ9H5J8 278 aaPredicted RBP16.09■□□□□ 0.17
SH3YL1-220ENST00000475027 PPEF1O14829 653 aaPredicted RBP16.08■□□□□ 0.16
SH3YL1-220ENST00000475027 HCLS1P14317 486 aaPredicted RBP16.08■□□□□ 0.16
SH3YL1-220ENST00000475027 HDGFL1Q5TGJ6 251 aa16.08■□□□□ 0.16
SH3YL1-220ENST00000475027 ISCA1Q9BUE6 129 aa16.08■□□□□ 0.16
SH3YL1-220ENST00000475027 RNF123Q5XPI4 1314 aa16.08■□□□□ 0.16
SH3YL1-220ENST00000475027 PASKQ96RG2 1323 aa16.08■□□□□ 0.16
SH3YL1-220ENST00000475027 TCERG1O14776 1098 aaKnown RBP16.07■□□□□ 0.16
SH3YL1-220ENST00000475027 CHADLQ6NUI6 762 aa16.07■□□□□ 0.16
SH3YL1-220ENST00000475027 CC2D2BQ6DHV5 1058 aa16.06■□□□□ 0.16
SH3YL1-220ENST00000475027 C8orf58Q8NAV2 365 aa16.06■□□□□ 0.16
SH3YL1-220ENST00000475027 PLBD2Q8NHP8 589 aa16.06■□□□□ 0.16
SH3YL1-220ENST00000475027 RBM17Q96I25 401 aaKnown RBP16.06■□□□□ 0.16
SH3YL1-220ENST00000475027 ITGBL1O95965 494 aaPredicted RBP16.05■□□□□ 0.16
SH3YL1-220ENST00000475027 NLRP3Q96P20 1036 aa16.05■□□□□ 0.16
SH3YL1-220ENST00000475027 PHAXQ9H814 394 aaKnown RBP16.05■□□□□ 0.16
SH3YL1-220ENST00000475027 IFT57Q9NWB7 429 aa16.05■□□□□ 0.16
SH3YL1-220ENST00000475027 ATP6V0A2Q9Y487 856 aa16.05■□□□□ 0.16
SH3YL1-220ENST00000475027 SCN9AQ15858 1988 aa16.05■□□□□ 0.16
SH3YL1-220ENST00000475027 SH3TC1Q8TE82 1336 aa16.04■□□□□ 0.16
SH3YL1-220ENST00000475027 ATP5J2-PTCD1G3V325 749 aa16.04■□□□□ 0.16
SH3YL1-220ENST00000475027 SCNN1DP51172 638 aa16.04■□□□□ 0.16
SH3YL1-220ENST00000475027 HSP90AB3PQ58FF7 597 aa16.04■□□□□ 0.16
SH3YL1-220ENST00000475027 RTFDC1Q9BY42 306 aaPredicted RBP16.04■□□□□ 0.16
SH3YL1-220ENST00000475027 DBF4Q9UBU7 674 aaPredicted RBP16.04■□□□□ 0.16
SH3YL1-220ENST00000475027 TRMT112Q9UI30 125 aaKnown RBP16.04■□□□□ 0.16
SH3YL1-220ENST00000475027 TRPM7Q96QT4 1865 aa16.03■□□□□ 0.16
SH3YL1-220ENST00000475027 IFFO2Q5TF58 517 aa16.03■□□□□ 0.16
SH3YL1-220ENST00000475027 ANKRD13DQ6ZTN6 518 aa16.03■□□□□ 0.16
SH3YL1-220ENST00000475027 LDHDQ86WU2 507 aa16.03■□□□□ 0.16
SH3YL1-220ENST00000475027 GPC2Q8N158 579 aa16.03■□□□□ 0.16
SH3YL1-220ENST00000475027 TSPYL6Q8N831 410 aa16.03■□□□□ 0.16
SH3YL1-220ENST00000475027 HACL1Q9UJ83 578 aa16.03■□□□□ 0.16
SH3YL1-220ENST00000475027 MYH3P11055 1940 aa16.03■□□□□ 0.16
SH3YL1-220ENST00000475027 ZNF646O15015 1829 aaPredicted RBP16.03■□□□□ 0.16
SH3YL1-220ENST00000475027 SPEF2Q9C093 1822 aa16.03■□□□□ 0.16
SH3YL1-220ENST00000475027 IQCA1LA6NCM1 817 aa16.02■□□□□ 0.16
SH3YL1-220ENST00000475027 ELL2O00472 640 aaPredicted RBP16.02■□□□□ 0.16
SH3YL1-220ENST00000475027 EPHX2P34913 555 aa16.02■□□□□ 0.16
SH3YL1-220ENST00000475027 AOC3Q16853 763 aa16.02■□□□□ 0.16
SH3YL1-220ENST00000475027 FAM89AQ96GI7 184 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms