RNA–Protein interactions for RNA: ENST00000474986.2

YIF1A-206, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 1 (best)

Gene YIF1A, Length 860 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-206ENST00000474986 PTPRCP08575 1304 aa29.1■■■□□ 2.25
YIF1A-206ENST00000474986 KLRG2A4D1S0 409 aaPredicted RBP29.09■■■□□ 2.25
YIF1A-206ENST00000474986 NUTM1Q86Y26 1132 aa29.09■■■□□ 2.25
YIF1A-206ENST00000474986 CCDC24Q8N4L8 307 aa29.09■■■□□ 2.25
YIF1A-206ENST00000474986 TRMT112Q9UI30 125 aaKnown RBP29.09■■■□□ 2.25
YIF1A-206ENST00000474986 KIAA1551Q9HCM1 1747 aa29.08■■■□□ 2.25
YIF1A-206ENST00000474986 H0YIN7 160 aa29.08■■■□□ 2.25
YIF1A-206ENST00000474986 KCNA3P22001 575 aa29.08■■■□□ 2.25
YIF1A-206ENST00000474986 ERFEQ4G0M1 354 aa29.08■■■□□ 2.25
YIF1A-206ENST00000474986 ABCC12Q96J65 1359 aa29.08■■■□□ 2.25
YIF1A-206ENST00000474986 DCAF8L1A6NGE4 600 aa29.07■■■□□ 2.24
YIF1A-206ENST00000474986 SLC10A5Q5PT55 438 aa29.07■■■□□ 2.24
YIF1A-206ENST00000474986 C2CD5Q86YS7 1000 aa29.07■■■□□ 2.24
YIF1A-206ENST00000474986 SH3TC1Q8TE82 1336 aa29.07■■■□□ 2.24
YIF1A-206ENST00000474986 BCL2L13Q9BXK5 485 aa29.07■■■□□ 2.24
YIF1A-206ENST00000474986 CWC25Q9NXE8 425 aaPredicted RBP29.07■■■□□ 2.24
YIF1A-206ENST00000474986 IGKV5-2P06315 115 aa29.06■■■□□ 2.24
YIF1A-206ENST00000474986 CHRNA5P30532 468 aa29.06■■■□□ 2.24
YIF1A-206ENST00000474986 PIM2Q9P1W9 311 aa29.06■■■□□ 2.24
YIF1A-206ENST00000474986 LINS1Q8NG48 757 aa29.05■■■□□ 2.24
YIF1A-206ENST00000474986 ANKRD31Q8N7Z5 1873 aa29.04■■■□□ 2.24
YIF1A-206ENST00000474986 NEURL1BA8MQ27 555 aa29.03■■■□□ 2.24
YIF1A-206ENST00000474986 SRGNP10124 158 aa29.03■■■□□ 2.24
YIF1A-206ENST00000474986 ZBTB38Q8NAP3 1195 aaPredicted RBP29.03■■■□□ 2.24
YIF1A-206ENST00000474986 KIF16BQ96L93 1317 aa29.02■■■□□ 2.24
YIF1A-206ENST00000474986 F6X3S4 739 aa29.02■■■□□ 2.24
YIF1A-206ENST00000474986 PCCAP05165 728 aaPredicted RBP29.02■■■□□ 2.24
YIF1A-206ENST00000474986 CRY2Q49AN0 593 aa29.02■■■□□ 2.24
YIF1A-206ENST00000474986 N4BP2Q86UW6 1770 aaPredicted RBP29.01■■■□□ 2.23
YIF1A-206ENST00000474986 HSP90B1P14625 803 aaKnown RBP29.01■■■□□ 2.23
YIF1A-206ENST00000474986 GPR162Q16538 588 aa29.01■■■□□ 2.23
YIF1A-206ENST00000474986 STYK1Q6J9G0 422 aa29.01■■■□□ 2.23
YIF1A-206ENST00000474986 FAM89AQ96GI7 184 aa29.01■■■□□ 2.23
YIF1A-206ENST00000474986 MASTLQ96GX5 879 aa29.01■■■□□ 2.23
YIF1A-206ENST00000474986 NPR1P16066 1061 aa29■■■□□ 2.23
YIF1A-206ENST00000474986 CWF19L2Q2TBE0 894 aaKnown RBP29■■■□□ 2.23
YIF1A-206ENST00000474986 BEND3Q5T5X7 828 aa29■■■□□ 2.23
YIF1A-206ENST00000474986 NLRP3Q96P20 1036 aa29■■■□□ 2.23
YIF1A-206ENST00000474986 DALRD3Q5D0E6 543 aaKnown RBP28.99■■■□□ 2.23
YIF1A-206ENST00000474986 GRIN3BO60391 1043 aa28.98■■■□□ 2.23
YIF1A-206ENST00000474986 PELP1Q8IZL8 1130 aaKnown RBP28.98■■■□□ 2.23
YIF1A-206ENST00000474986 SYNE4Q8N205 404 aa28.98■■■□□ 2.23
YIF1A-206ENST00000474986 TTLL6Q8N841 843 aa28.98■■■□□ 2.23
YIF1A-206ENST00000474986 ARHGAP45Q92619 1136 aa28.98■■■□□ 2.23
YIF1A-206ENST00000474986 CNKSR1Q969H4 720 aa28.98■■■□□ 2.23
YIF1A-206ENST00000474986 HCLS1P14317 486 aaPredicted RBP28.97■■■□□ 2.23
YIF1A-206ENST00000474986 YBX3P16989 372 aaKnown RBP eCLIP28.97■■■□□ 2.233e-6■□□□□ 10
YIF1A-206ENST00000474986 GCKRQ14397 625 aa28.97■■■□□ 2.23
YIF1A-206ENST00000474986 ZNF622Q969S3 477 aaKnown RBP eCLIP28.97■■■□□ 2.23
YIF1A-206ENST00000474986 NOB1Q9ULX3 412 aaKnown RBP28.97■■■□□ 2.23
YIF1A-206ENST00000474986 BCS1LQ9Y276 419 aa28.97■■■□□ 2.23
YIF1A-206ENST00000474986 DLEC1Q9Y238 1755 aa28.97■■■□□ 2.23
YIF1A-206ENST00000474986 CDHR2Q9BYE9 1310 aa28.96■■■□□ 2.23
YIF1A-206ENST00000474986 BRCA1P38398 1863 aaKnown RBP28.96■■■□□ 2.23
YIF1A-206ENST00000474986 IRS4O14654 1257 aaPredicted RBP28.96■■■□□ 2.23
YIF1A-206ENST00000474986 ALDH1L1O75891 902 aa28.96■■■□□ 2.23
YIF1A-206ENST00000474986 API5Q9BZZ5 524 aaKnown RBP28.96■■■□□ 2.23
YIF1A-206ENST00000474986 SRCIN1Q9C0H9 1055 aa28.96■■■□□ 2.23
YIF1A-206ENST00000474986 TNRC6CQ9HCJ0 1690 aaKnown RBP28.96■■■□□ 2.23
YIF1A-206ENST00000474986 COL11A2P13942 1736 aaPredicted RBP28.95■■■□□ 2.23
YIF1A-206ENST00000474986 HOXA10P31260 410 aaPredicted RBP28.95■■■□□ 2.22
YIF1A-206ENST00000474986 SLC4A10Q6U841 1118 aa28.95■■■□□ 2.22
YIF1A-206ENST00000474986 H7C1W4 665 aa28.94■■■□□ 2.22
YIF1A-206ENST00000474986 IPO8O15397 1037 aaKnown RBP28.94■■■□□ 2.22
YIF1A-206ENST00000474986 YTHDC1Q96MU7 727 aaKnown RBP28.94■■■□□ 2.22
YIF1A-206ENST00000474986 WWC3Q9ULE0 1092 aa28.94■■■□□ 2.22
YIF1A-206ENST00000474986 BCAR3O75815 825 aa28.93■■■□□ 2.22
YIF1A-206ENST00000474986 ALDH1B1P30837 517 aa28.93■■■□□ 2.22
YIF1A-206ENST00000474986 RTL5Q5HYW3 569 aaPredicted RBP28.93■■■□□ 2.22
YIF1A-206ENST00000474986 C3orf67Q6ZVT6 689 aa28.93■■■□□ 2.22
YIF1A-206ENST00000474986 RPGRQ92834 1020 aaKnown RBP28.93■■■□□ 2.22
YIF1A-206ENST00000474986 SF3B3Q15393 1217 aaKnown RBP28.91■■■□□ 2.22
YIF1A-206ENST00000474986 RBM17Q96I25 401 aaKnown RBP28.91■■■□□ 2.22
YIF1A-206ENST00000474986 CRAMP1Q96RY5 1269 aa28.91■■■□□ 2.22
YIF1A-206ENST00000474986 PDE8AO60658 829 aa28.9■■■□□ 2.22
YIF1A-206ENST00000474986 PRPF40BQ6NWY9 871 aaKnown RBP28.89■■■□□ 2.22
YIF1A-206ENST00000474986 UBE3BQ7Z3V4 1068 aa28.89■■■□□ 2.22
YIF1A-206ENST00000474986 CCT4P50991 539 aaKnown RBP28.88■■■□□ 2.21
YIF1A-206ENST00000474986 CASP7P55210 303 aa28.88■■■□□ 2.21
YIF1A-206ENST00000474986 ATF7IPQ6VMQ6 1270 aa28.88■■■□□ 2.21
YIF1A-206ENST00000474986 PLA2G12BQ9BX93 195 aa28.88■■■□□ 2.21
YIF1A-206ENST00000474986 GOLGB1Q14789 3259 aaKnown RBP28.88■■■□□ 2.21
YIF1A-206ENST00000474986 DDX60Q8IY21 1712 aaKnown RBP28.87■■■□□ 2.21
YIF1A-206ENST00000474986 GRM8O00222 908 aa28.87■■■□□ 2.21
YIF1A-206ENST00000474986 JARID2Q92833 1246 aaPredicted RBP28.87■■■□□ 2.21
YIF1A-206ENST00000474986 LAMB2P55268 1798 aa28.87■■■□□ 2.21
YIF1A-206ENST00000474986 DDX46Q7L014 1031 aaKnown RBP28.86■■■□□ 2.21
YIF1A-206ENST00000474986 FRAT1Q92837 279 aaPredicted RBP28.86■■■□□ 2.21
YIF1A-206ENST00000474986 C9orf78Q9NZ63 289 aaPredicted RBP28.86■■■□□ 2.21
YIF1A-206ENST00000474986 ARFGEF1Q9Y6D6 1849 aa28.85■■■□□ 2.21
YIF1A-206ENST00000474986 SOGA3Q5TF21 947 aa28.85■■■□□ 2.21
YIF1A-206ENST00000474986 ZKSCAN2Q63HK3 967 aa28.85■■■□□ 2.21
YIF1A-206ENST00000474986 ABCC4O15439 1325 aa28.85■■■□□ 2.21
YIF1A-206ENST00000474986 TRIM27P14373 513 aa28.84■■■□□ 2.21
YIF1A-206ENST00000474986 CCDC152Q4G0S7 254 aa28.84■■■□□ 2.21
YIF1A-206ENST00000474986 C7orf43Q8WVR3 580 aa28.84■■■□□ 2.21
YIF1A-206ENST00000474986 RCAN3Q9UKA8 241 aa28.84■■■□□ 2.21
YIF1A-206ENST00000474986 UTYO14607 1347 aa28.84■■■□□ 2.21
YIF1A-206ENST00000474986 CTSWP56202 376 aa28.83■■■□□ 2.21
YIF1A-206ENST00000474986 UTRNP46939 3433 aa28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms