RNA–Protein interactions for RNA: ENST00000474911.5

RTN1-205, Transcript of reticulon 1, humanhuman

TSL 2

Gene RTN1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-205ENST00000474911 PPP4R3CPQ6ZMV5 832 aa17.07■□□□□ 0.32
RTN1-205ENST00000474911 CRBNQ96SW2 442 aa17.07■□□□□ 0.32
RTN1-205ENST00000474911 NIP7Q9Y221 180 aaKnown RBP eCLIP17.07■□□□□ 0.32
RTN1-205ENST00000474911 ST5P78524 1137 aa17.06■□□□□ 0.32
RTN1-205ENST00000474911 TTLL7Q6ZT98 887 aa17.06■□□□□ 0.32
RTN1-205ENST00000474911 NBPF5PQ86XG9 351 aaPredicted RBP17.06■□□□□ 0.32
RTN1-205ENST00000474911 EXOC6Q8TAG9 804 aa17.06■□□□□ 0.32
RTN1-205ENST00000474911 PANK1Q8TE04 598 aa17.06■□□□□ 0.32
RTN1-205ENST00000474911 CHPF2Q9P2E5 772 aa17.06■□□□□ 0.32
RTN1-205ENST00000474911 ADCY9O60503 1353 aa17.06■□□□□ 0.32
RTN1-205ENST00000474911 NPHP1O15259 732 aa17.05■□□□□ 0.32
RTN1-205ENST00000474911 RLBP1P12271 317 aa17.05■□□□□ 0.32
RTN1-205ENST00000474911 TPTE2Q6XPS3 522 aa17.05■□□□□ 0.32
RTN1-205ENST00000474911 C2CD5Q86YS7 1000 aa17.05■□□□□ 0.32
RTN1-205ENST00000474911 CLUAP1Q96AJ1 413 aa17.05■□□□□ 0.32
RTN1-205ENST00000474911 TNNQ9UQP3 1299 aa17.05■□□□□ 0.32
RTN1-205ENST00000474911 FLIIQ13045 1269 aa17.04■□□□□ 0.32
RTN1-205ENST00000474911 TTLL6Q8N841 843 aa17.04■□□□□ 0.32
RTN1-205ENST00000474911 DDX21Q9NR30 783 aaKnown RBP eCLIP17.04■□□□□ 0.32
RTN1-205ENST00000474911 ANKRD36CQ5JPF3 1778 aa17.04■□□□□ 0.32
RTN1-205ENST00000474911 ARFGEF2Q9Y6D5 1785 aa17.04■□□□□ 0.32
RTN1-205ENST00000474911 ABCC4O15439 1325 aa17.04■□□□□ 0.32
RTN1-205ENST00000474911 SBF1O95248 1867 aa17.04■□□□□ 0.32
RTN1-205ENST00000474911 PROSER3Q2NL68 480 aa17.04■□□□□ 0.32
RTN1-205ENST00000474911 GIGYF2Q6Y7W6 1299 aaKnown RBP17.04■□□□□ 0.32
RTN1-205ENST00000474911 ARHGAP27Q6ZUM4 889 aa17.04■□□□□ 0.32
RTN1-205ENST00000474911 G2E3Q7L622 706 aa17.04■□□□□ 0.32
RTN1-205ENST00000474911 HYPKQ9NX55 129 aa17.04■□□□□ 0.32
RTN1-205ENST00000474911 IBTKQ9P2D0 1353 aaPredicted RBP17.03■□□□□ 0.32
RTN1-205ENST00000474911 MVPQ14764 893 aaKnown RBP17.03■□□□□ 0.32
RTN1-205ENST00000474911 CCDC24Q8N4L8 307 aa17.03■□□□□ 0.32
RTN1-205ENST00000474911 ZBTB3Q9H5J0 574 aa17.03■□□□□ 0.32
RTN1-205ENST00000474911 PPP4R2Q9NY27 417 aa17.03■□□□□ 0.32
RTN1-205ENST00000474911 COG6Q9Y2V7 657 aa17.03■□□□□ 0.32
RTN1-205ENST00000474911 KLRG2A4D1S0 409 aaPredicted RBP17.02■□□□□ 0.31
RTN1-205ENST00000474911 FKBP5Q13451 457 aaPredicted RBP17.02■□□□□ 0.31
RTN1-205ENST00000474911 ZNF34Q8IZ26 560 aa17.02■□□□□ 0.31
RTN1-205ENST00000474911 NYXQ9GZU5 481 aa17.02■□□□□ 0.31
RTN1-205ENST00000474911 CACNA1SQ13698 1873 aa17.02■□□□□ 0.31
RTN1-205ENST00000474911 ANXA1P04083 346 aa17.01■□□□□ 0.31
RTN1-205ENST00000474911 SRGNP10124 158 aa17.01■□□□□ 0.31
RTN1-205ENST00000474911 STYK1Q6J9G0 422 aa17.01■□□□□ 0.31
RTN1-205ENST00000474911 COPS6Q7L5N1 327 aa17.01■□□□□ 0.31
RTN1-205ENST00000474911 TMEM57Q8N5G2 664 aa17.01■□□□□ 0.31
RTN1-205ENST00000474911 PHAXQ9H814 394 aaKnown RBP17.01■□□□□ 0.31
RTN1-205ENST00000474911 UBN2Q6ZU65 1347 aa17■□□□□ 0.31
RTN1-205ENST00000474911 AAMPQ13685 434 aa17■□□□□ 0.31
RTN1-205ENST00000474911 ITPRIPQ8IWB1 547 aa17■□□□□ 0.31
RTN1-205ENST00000474911 MASTLQ96GX5 879 aa17■□□□□ 0.31
RTN1-205ENST00000474911 DDX19BQ9UMR2 479 aa17■□□□□ 0.31
RTN1-205ENST00000474911 SLX4Q8IY92 1834 aa17■□□□□ 0.31
RTN1-205ENST00000474911 RIC1Q4ADV7 1423 aa17■□□□□ 0.31
RTN1-205ENST00000474911 FER1L6Q2WGJ9 1857 aa16.99■□□□□ 0.31
RTN1-205ENST00000474911 PARP10Q53GL7 1025 aa16.99■□□□□ 0.31
RTN1-205ENST00000474911 HSP90AB3PQ58FF7 597 aa16.99■□□□□ 0.31
RTN1-205ENST00000474911 XAGE3Q8WTP9 111 aa16.99■□□□□ 0.31
RTN1-205ENST00000474911 CNKSR1Q969H4 720 aa16.99■□□□□ 0.31
RTN1-205ENST00000474911 ZNF622Q969S3 477 aaKnown RBP eCLIP16.99■□□□□ 0.31
RTN1-205ENST00000474911 GTF2E1P29083 439 aaPredicted RBP16.98■□□□□ 0.31
RTN1-205ENST00000474911 INTS3Q68E01 1043 aaKnown RBP16.98■□□□□ 0.31
RTN1-205ENST00000474911 CCDC88AQ3V6T2 1871 aa16.98■□□□□ 0.31
RTN1-205ENST00000474911 TNRC6CQ9HCJ0 1690 aaKnown RBP16.98■□□□□ 0.31
RTN1-205ENST00000474911 FAM177BA6PVY3 158 aa16.97■□□□□ 0.31
RTN1-205ENST00000474911 NPR1P16066 1061 aa16.97■□□□□ 0.31
RTN1-205ENST00000474911 GPTP24298 496 aa16.97■□□□□ 0.31
RTN1-205ENST00000474911 AIMP1Q12904 312 aaKnown RBP16.97■□□□□ 0.31
RTN1-205ENST00000474911 SUSD4Q5VX71 490 aa16.97■□□□□ 0.31
RTN1-205ENST00000474911 PPP1R42Q7Z4L9 355 aa16.97■□□□□ 0.31
RTN1-205ENST00000474911 CHMP4BQ9H444 224 aaKnown RBP16.97■□□□□ 0.31
RTN1-205ENST00000474911 NTSR2O95665 410 aa16.96■□□□□ 0.31
RTN1-205ENST00000474911 DDX58O95786 925 aaKnown RBP16.96■□□□□ 0.31
RTN1-205ENST00000474911 CCT4P50991 539 aaKnown RBP16.96■□□□□ 0.31
RTN1-205ENST00000474911 PLBD2Q8NHP8 589 aa16.96■□□□□ 0.31
RTN1-205ENST00000474911 ABCC12Q96J65 1359 aa16.96■□□□□ 0.31
RTN1-205ENST00000474911 F6X3S4 739 aa16.96■□□□□ 0.3
RTN1-205ENST00000474911 TCIRG1Q13488 830 aa16.96■□□□□ 0.3
RTN1-205ENST00000474911 CRY2Q49AN0 593 aa16.96■□□□□ 0.3
RTN1-205ENST00000474911 NUTM1Q86Y26 1132 aa16.96■□□□□ 0.3
RTN1-205ENST00000474911 DICER1Q9UPY3 1922 aaKnown RBP16.95■□□□□ 0.3
RTN1-205ENST00000474911 ERFEQ4G0M1 354 aa16.95■□□□□ 0.3
RTN1-205ENST00000474911 C9orf131Q5VYM1 1079 aa16.95■□□□□ 0.3
RTN1-205ENST00000474911 PRPF40BQ6NWY9 871 aaKnown RBP16.95■□□□□ 0.3
RTN1-205ENST00000474911 SLC4A10Q6U841 1118 aa16.95■□□□□ 0.3
RTN1-205ENST00000474911 KSR2Q6VAB6 950 aa16.95■□□□□ 0.3
RTN1-205ENST00000474911 ANKRD13DQ6ZTN6 518 aa16.95■□□□□ 0.3
RTN1-205ENST00000474911 PI4KAP2A4QPH2 592 aa16.94■□□□□ 0.3
RTN1-205ENST00000474911 SOGA3Q5TF21 947 aa16.94■□□□□ 0.3
RTN1-205ENST00000474911 PI4KAP1Q8N8J0 262 aa16.94■□□□□ 0.3
RTN1-205ENST00000474911 DNAAF4Q8WXU2 420 aa16.94■□□□□ 0.3
RTN1-205ENST00000474911 UTP14AQ9BVJ6 771 aaKnown RBP16.94■□□□□ 0.3
RTN1-205ENST00000474911 GPBP1L1Q9HC44 474 aaPredicted RBP16.94■□□□□ 0.3
RTN1-205ENST00000474911 C21orf2O43822 256 aa16.93■□□□□ 0.3
RTN1-205ENST00000474911 ALDH1B1P30837 517 aa16.93■□□□□ 0.3
RTN1-205ENST00000474911 SLC10A5Q5PT55 438 aa16.93■□□□□ 0.3
RTN1-205ENST00000474911 NLRP10Q86W26 655 aa16.93■□□□□ 0.3
RTN1-205ENST00000474911 CCDC136Q96JN2 1154 aa16.93■□□□□ 0.3
RTN1-205ENST00000474911 RNF181Q9P0P0 153 aa16.93■□□□□ 0.3
RTN1-205ENST00000474911 ZC3H4Q9UPT8 1303 aaKnown RBP16.93■□□□□ 0.3
RTN1-205ENST00000474911 NFKBIEO00221 500 aa16.92■□□□□ 0.3
RTN1-205ENST00000474911 LMNB1P20700 586 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms