RNA–Protein interactions for RNA: ENST00000474838.1

ITGB5-205, Transcript of integrin subunit beta 5, humanhuman

TSL 3

Gene ITGB5, Length 475 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB5-205ENST00000474838 APLP1P51693 650 aa21.05■□□□□ 0.96
ITGB5-205ENST00000474838 FKBP4Q02790 459 aaKnown RBP eCLIP21.05■□□□□ 0.96
ITGB5-205ENST00000474838 CALD1Q05682 793 aaKnown RBP21.05■□□□□ 0.96
ITGB5-205ENST00000474838 HSP90AB3PQ58FF7 597 aa21.05■□□□□ 0.96
ITGB5-205ENST00000474838 RTKN2Q8IZC4 609 aa21.05■□□□□ 0.96
ITGB5-205ENST00000474838 RPGRQ92834 1020 aaKnown RBP21.05■□□□□ 0.96
ITGB5-205ENST00000474838 MBIPQ9NS73 344 aa21.05■□□□□ 0.96
ITGB5-205ENST00000474838 CHPF2Q9P2E5 772 aa21.05■□□□□ 0.96
ITGB5-205ENST00000474838 ZNF853P0CG23 659 aa21.04■□□□□ 0.96
ITGB5-205ENST00000474838 HOXA10P31260 410 aaPredicted RBP21.04■□□□□ 0.96
ITGB5-205ENST00000474838 AIMP1Q12904 312 aaKnown RBP21.04■□□□□ 0.96
ITGB5-205ENST00000474838 IFT57Q9NWB7 429 aa21.04■□□□□ 0.96
ITGB5-205ENST00000474838 SNED1Q8TER0 1413 aa21.04■□□□□ 0.96
ITGB5-205ENST00000474838 OLFM4Q6UX06 510 aa21.03■□□□□ 0.96
ITGB5-205ENST00000474838 UTP14AQ9BVJ6 771 aaKnown RBP21.03■□□□□ 0.96
ITGB5-205ENST00000474838 GNAI1P63096 354 aa21.02■□□□□ 0.96
ITGB5-205ENST00000474838 DUSP27Q5VZP5 1158 aa21.02■□□□□ 0.96
ITGB5-205ENST00000474838 SMC1BQ8NDV3 1235 aa21.02■□□□□ 0.96
ITGB5-205ENST00000474838 DBF4Q9UBU7 674 aaPredicted RBP21.02■□□□□ 0.96
ITGB5-205ENST00000474838 CC2D2BQ6DHV5 1058 aa21.01■□□□□ 0.95
ITGB5-205ENST00000474838 NLRP10Q86W26 655 aa21.01■□□□□ 0.95
ITGB5-205ENST00000474838 CRAMP1Q96RY5 1269 aa21.01■□□□□ 0.95
ITGB5-205ENST00000474838 TCIRG1Q13488 830 aa21■□□□□ 0.95
ITGB5-205ENST00000474838 C3orf67Q6ZVT6 689 aa21■□□□□ 0.95
ITGB5-205ENST00000474838 RBM17Q96I25 401 aaKnown RBP21■□□□□ 0.95
ITGB5-205ENST00000474838 NLRP3Q96P20 1036 aa21■□□□□ 0.95
ITGB5-205ENST00000474838 ZNF277Q9NRM2 450 aaPredicted RBP21■□□□□ 0.95
ITGB5-205ENST00000474838 POTECB2RU33 542 aa20.99■□□□□ 0.95
ITGB5-205ENST00000474838 CCDC184Q52MB2 194 aa20.99■□□□□ 0.95
ITGB5-205ENST00000474838 SLC10A5Q5PT55 438 aa20.99■□□□□ 0.95
ITGB5-205ENST00000474838 PLBD2Q8NHP8 589 aa20.99■□□□□ 0.95
ITGB5-205ENST00000474838 PSMD1Q99460 953 aa20.99■□□□□ 0.95
ITGB5-205ENST00000474838 HYPKQ9NX55 129 aa20.99■□□□□ 0.95
ITGB5-205ENST00000474838 ZNF316A6NFI3 1004 aaPredicted RBP20.98■□□□□ 0.95
ITGB5-205ENST00000474838 PPEF1O14829 653 aaPredicted RBP20.98■□□□□ 0.95
ITGB5-205ENST00000474838 GRIPAP1Q4V328 841 aa20.98■□□□□ 0.95
ITGB5-205ENST00000474838 DDNO94850 711 aaPredicted RBP20.97■□□□□ 0.95
ITGB5-205ENST00000474838 IARSP41252 1262 aaKnown RBP20.97■□□□□ 0.95
ITGB5-205ENST00000474838 TRMT112Q9UI30 125 aaKnown RBP20.97■□□□□ 0.95
ITGB5-205ENST00000474838 ANKRD13DQ6ZTN6 518 aa20.96■□□□□ 0.95
ITGB5-205ENST00000474838 SYNE4Q8N205 404 aa20.96■□□□□ 0.95
ITGB5-205ENST00000474838 SH3TC1Q8TE82 1336 aa20.96■□□□□ 0.95
ITGB5-205ENST00000474838 LAMB2P55268 1798 aa20.95■□□□□ 0.94
ITGB5-205ENST00000474838 L3MBTL3Q96JM7 780 aaPredicted RBP20.95■□□□□ 0.94
ITGB5-205ENST00000474838 ZNF541Q9H0D2 1346 aa20.95■□□□□ 0.94
ITGB5-205ENST00000474838 ABCC4O15439 1325 aa20.94■□□□□ 0.94
ITGB5-205ENST00000474838 IQCA1LA6NCM1 817 aa20.93■□□□□ 0.94
ITGB5-205ENST00000474838 ANP32CO43423 234 aa20.93■□□□□ 0.94
ITGB5-205ENST00000474838 HCLS1P14317 486 aaPredicted RBP20.93■□□□□ 0.94
ITGB5-205ENST00000474838 CCDC27Q2M243 656 aa20.93■□□□□ 0.94
ITGB5-205ENST00000474838 ISCA1Q9BUE6 129 aa20.93■□□□□ 0.94
ITGB5-205ENST00000474838 MRS2Q9HD23 443 aa20.93■□□□□ 0.94
ITGB5-205ENST00000474838 FZD9O00144 591 aa20.92■□□□□ 0.94
ITGB5-205ENST00000474838 ELL2O00472 640 aaPredicted RBP20.92■□□□□ 0.94
ITGB5-205ENST00000474838 SLC51AQ86UW1 340 aa20.92■□□□□ 0.94
ITGB5-205ENST00000474838 DNAJC5GQ8N7S2 189 aa20.92■□□□□ 0.94
ITGB5-205ENST00000474838 JDP2Q8WYK2 163 aa20.92■□□□□ 0.94
ITGB5-205ENST00000474838 ATP6V0A2Q9Y487 856 aa20.92■□□□□ 0.94
ITGB5-205ENST00000474838 SCN4AP35499 1836 aa20.92■□□□□ 0.94
ITGB5-205ENST00000474838 COL4A5P29400 1685 aa20.91■□□□□ 0.94
ITGB5-205ENST00000474838 GOLGA2Q08379 1002 aa20.91■□□□□ 0.94
ITGB5-205ENST00000474838 DDX60Q8IY21 1712 aaKnown RBP20.91■□□□□ 0.94
ITGB5-205ENST00000474838 C8orf58Q8NAV2 365 aa20.91■□□□□ 0.94
ITGB5-205ENST00000474838 CHMP4AQ9BY43 222 aa20.91■□□□□ 0.94
ITGB5-205ENST00000474838 TMX4Q9H1E5 349 aaPredicted RBP20.91■□□□□ 0.94
ITGB5-205ENST00000474838 TCERG1O14776 1098 aaKnown RBP20.9■□□□□ 0.94
ITGB5-205ENST00000474838 ATP5J2-PTCD1G3V325 749 aa20.89■□□□□ 0.93
ITGB5-205ENST00000474838 BBOX1O75936 387 aa20.89■□□□□ 0.93
ITGB5-205ENST00000474838 HTRA3P83110 453 aa20.89■□□□□ 0.93
ITGB5-205ENST00000474838 TRIM28Q13263 835 aaKnown RBP20.89■□□□□ 0.93
ITGB5-205ENST00000474838 NCBP3Q53F19 620 aaKnown RBP20.89■□□□□ 0.93
ITGB5-205ENST00000474838 DDX46Q7L014 1031 aaKnown RBP20.89■□□□□ 0.93
ITGB5-205ENST00000474838 WWC1Q8IX03 1113 aa20.89■□□□□ 0.93
ITGB5-205ENST00000474838 GRAPQ13588 217 aa20.88■□□□□ 0.93
ITGB5-205ENST00000474838 CCDC30Q5VVM6 783 aa20.88■□□□□ 0.93
ITGB5-205ENST00000474838 CHADLQ6NUI6 762 aa20.88■□□□□ 0.93
ITGB5-205ENST00000474838 RIC3Q7Z5B4 369 aa20.88■□□□□ 0.93
ITGB5-205ENST00000474838 GPC2Q8N158 579 aa20.88■□□□□ 0.93
ITGB5-205ENST00000474838 LARGE2Q8N3Y3 721 aa20.88■□□□□ 0.93
ITGB5-205ENST00000474838 GRAPLQ8TC17 118 aaPredicted RBP20.88■□□□□ 0.93
ITGB5-205ENST00000474838 TAF1DQ9H5J8 278 aaPredicted RBP20.88■□□□□ 0.93
ITGB5-205ENST00000474838 PHAXQ9H814 394 aaKnown RBP20.88■□□□□ 0.93
ITGB5-205ENST00000474838 IL16Q14005 1332 aa20.87■□□□□ 0.93
ITGB5-205ENST00000474838 POTEIP0CG38 1075 aa20.87■□□□□ 0.93
ITGB5-205ENST00000474838 POTEJP0CG39 1038 aa20.87■□□□□ 0.93
ITGB5-205ENST00000474838 TSR2Q969E8 191 aaKnown RBP20.87■□□□□ 0.93
ITGB5-205ENST00000474838 ZNF428Q96B54 188 aa20.87■□□□□ 0.93
ITGB5-205ENST00000474838 FAM89AQ96GI7 184 aa20.87■□□□□ 0.93
ITGB5-205ENST00000474838 HACL1Q9UJ83 578 aa20.87■□□□□ 0.93
ITGB5-205ENST00000474838 EIF6P56537 245 aaKnown RBP20.86■□□□□ 0.93
ITGB5-205ENST00000474838 SP8Q8IXZ3 490 aa20.86■□□□□ 0.93
ITGB5-205ENST00000474838 TSPYL6Q8N831 410 aa20.86■□□□□ 0.93
ITGB5-205ENST00000474838 SUPT20HQ8NEM7 779 aa20.86■□□□□ 0.93
ITGB5-205ENST00000474838 KLRG1Q96E93 195 aa20.86■□□□□ 0.93
ITGB5-205ENST00000474838 RTFDC1Q9BY42 306 aaPredicted RBP20.86■□□□□ 0.93
ITGB5-205ENST00000474838 VPS33BQ9H267 617 aa20.86■□□□□ 0.93
ITGB5-205ENST00000474838 LRRC37AA6NMS7 1700 aa20.86■□□□□ 0.93
ITGB5-205ENST00000474838 PPIP5K2O43314 1243 aa20.85■□□□□ 0.93
ITGB5-205ENST00000474838 TMC4Q7Z404 712 aa20.85■□□□□ 0.93
ITGB5-205ENST00000474838 LDHDQ86WU2 507 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms