RNA–Protein interactions for RNA: ENST00000474807.5

DNMT3A-210, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 5

Gene DNMT3A, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-210ENST00000474807 POTECB2RU33 542 aa23.96■■□□□ 1.43
DNMT3A-210ENST00000474807 HOXA10P31260 410 aaPredicted RBP23.96■■□□□ 1.43
DNMT3A-210ENST00000474807 APLP1P51693 650 aa23.96■■□□□ 1.43
DNMT3A-210ENST00000474807 FKBP4Q02790 459 aaKnown RBP eCLIP23.96■■□□□ 1.43
DNMT3A-210ENST00000474807 CCDC184Q52MB2 194 aa23.96■■□□□ 1.43
DNMT3A-210ENST00000474807 HDGFL1Q5TGJ6 251 aa23.96■■□□□ 1.43
DNMT3A-210ENST00000474807 MBIPQ9NS73 344 aa23.96■■□□□ 1.43
DNMT3A-210ENST00000474807 CHPF2Q9P2E5 772 aa23.96■■□□□ 1.43
DNMT3A-210ENST00000474807 SNED1Q8TER0 1413 aa23.95■■□□□ 1.42
DNMT3A-210ENST00000474807 HSP90AB3PQ58FF7 597 aa23.95■■□□□ 1.42
DNMT3A-210ENST00000474807 RTKN2Q8IZC4 609 aa23.95■■□□□ 1.42
DNMT3A-210ENST00000474807 ANKRD36CQ5JPF3 1778 aa23.95■■□□□ 1.42
DNMT3A-210ENST00000474807 SLC10A5Q5PT55 438 aa23.94■■□□□ 1.42
DNMT3A-210ENST00000474807 C3orf67Q6ZVT6 689 aa23.94■■□□□ 1.42
DNMT3A-210ENST00000474807 RPGRQ92834 1020 aaKnown RBP23.94■■□□□ 1.42
DNMT3A-210ENST00000474807 UTP14AQ9BVJ6 771 aaKnown RBP23.94■■□□□ 1.42
DNMT3A-210ENST00000474807 TCIRG1Q13488 830 aa23.93■■□□□ 1.42
DNMT3A-210ENST00000474807 DUSP27Q5VZP5 1158 aa23.93■■□□□ 1.42
DNMT3A-210ENST00000474807 IFT57Q9NWB7 429 aa23.93■■□□□ 1.42
DNMT3A-210ENST00000474807 DBF4Q9UBU7 674 aaPredicted RBP23.93■■□□□ 1.42
DNMT3A-210ENST00000474807 RNF123Q5XPI4 1314 aa23.92■■□□□ 1.42
DNMT3A-210ENST00000474807 NLRP10Q86W26 655 aa23.92■■□□□ 1.42
DNMT3A-210ENST00000474807 SMC1BQ8NDV3 1235 aa23.92■■□□□ 1.42
DNMT3A-210ENST00000474807 CRAMP1Q96RY5 1269 aa23.92■■□□□ 1.42
DNMT3A-210ENST00000474807 ZNF277Q9NRM2 450 aaPredicted RBP23.92■■□□□ 1.42
DNMT3A-210ENST00000474807 DDNO94850 711 aaPredicted RBP23.91■■□□□ 1.42
DNMT3A-210ENST00000474807 GNAI1P63096 354 aa23.91■■□□□ 1.42
DNMT3A-210ENST00000474807 CALD1Q05682 793 aaKnown RBP23.91■■□□□ 1.42
DNMT3A-210ENST00000474807 RBM17Q96I25 401 aaKnown RBP23.91■■□□□ 1.42
DNMT3A-210ENST00000474807 NLRP3Q96P20 1036 aa23.91■■□□□ 1.42
DNMT3A-210ENST00000474807 CC2D2BQ6DHV5 1058 aa23.9■■□□□ 1.42
DNMT3A-210ENST00000474807 PSMD1Q99460 953 aa23.9■■□□□ 1.42
DNMT3A-210ENST00000474807 SYNE4Q8N205 404 aa23.89■■□□□ 1.41
DNMT3A-210ENST00000474807 DNAJC5GQ8N7S2 189 aa23.89■■□□□ 1.41
DNMT3A-210ENST00000474807 PLBD2Q8NHP8 589 aa23.89■■□□□ 1.41
DNMT3A-210ENST00000474807 ZNF316A6NFI3 1004 aaPredicted RBP23.88■■□□□ 1.41
DNMT3A-210ENST00000474807 IARSP41252 1262 aaKnown RBP23.88■■□□□ 1.41
DNMT3A-210ENST00000474807 ANKRD13DQ6ZTN6 518 aa23.88■■□□□ 1.41
DNMT3A-210ENST00000474807 HYPKQ9NX55 129 aa23.88■■□□□ 1.41
DNMT3A-210ENST00000474807 PPEF1O14829 653 aaPredicted RBP23.86■■□□□ 1.41
DNMT3A-210ENST00000474807 GRIPAP1Q4V328 841 aa23.86■■□□□ 1.41
DNMT3A-210ENST00000474807 SLC51AQ86UW1 340 aa23.86■■□□□ 1.41
DNMT3A-210ENST00000474807 TRMT112Q9UI30 125 aaKnown RBP23.86■■□□□ 1.41
DNMT3A-210ENST00000474807 SH3TC1Q8TE82 1336 aa23.85■■□□□ 1.41
DNMT3A-210ENST00000474807 ISCA1Q9BUE6 129 aa23.85■■□□□ 1.41
DNMT3A-210ENST00000474807 LAMB2P55268 1798 aa23.85■■□□□ 1.41
DNMT3A-210ENST00000474807 ZNF541Q9H0D2 1346 aa23.84■■□□□ 1.41
DNMT3A-210ENST00000474807 FZD9O00144 591 aa23.84■■□□□ 1.41
DNMT3A-210ENST00000474807 ELL2O00472 640 aaPredicted RBP23.84■■□□□ 1.41
DNMT3A-210ENST00000474807 HCLS1P14317 486 aaPredicted RBP23.84■■□□□ 1.41
DNMT3A-210ENST00000474807 HTRA3P83110 453 aa23.84■■□□□ 1.41
DNMT3A-210ENST00000474807 C8orf58Q8NAV2 365 aa23.84■■□□□ 1.41
DNMT3A-210ENST00000474807 L3MBTL3Q96JM7 780 aaPredicted RBP23.84■■□□□ 1.41
DNMT3A-210ENST00000474807 ABCC4O15439 1325 aa23.84■■□□□ 1.41
DNMT3A-210ENST00000474807 TCERG1O14776 1098 aaKnown RBP23.83■■□□□ 1.41
DNMT3A-210ENST00000474807 CCDC27Q2M243 656 aa23.82■■□□□ 1.4
DNMT3A-210ENST00000474807 ATP6V0A2Q9Y487 856 aa23.82■■□□□ 1.4
DNMT3A-210ENST00000474807 COL4A5P29400 1685 aa23.82■■□□□ 1.4
DNMT3A-210ENST00000474807 SCN4AP35499 1836 aa23.82■■□□□ 1.4
DNMT3A-210ENST00000474807 IQCA1LA6NCM1 817 aa23.81■■□□□ 1.4
DNMT3A-210ENST00000474807 ATP5J2-PTCD1G3V325 749 aa23.81■■□□□ 1.4
DNMT3A-210ENST00000474807 ZNF428Q96B54 188 aa23.81■■□□□ 1.4
DNMT3A-210ENST00000474807 PHAXQ9H814 394 aaKnown RBP23.81■■□□□ 1.4
DNMT3A-210ENST00000474807 ANP32CO43423 234 aa23.8■■□□□ 1.4
DNMT3A-210ENST00000474807 POTEIP0CG38 1075 aa23.8■■□□□ 1.4
DNMT3A-210ENST00000474807 POTEJP0CG39 1038 aa23.8■■□□□ 1.4
DNMT3A-210ENST00000474807 TRIM28Q13263 835 aaKnown RBP23.8■■□□□ 1.4
DNMT3A-210ENST00000474807 JDP2Q8WYK2 163 aa23.8■■□□□ 1.4
DNMT3A-210ENST00000474807 DDX60Q8IY21 1712 aaKnown RBP23.79■■□□□ 1.4
DNMT3A-210ENST00000474807 BBOX1O75936 387 aa23.79■■□□□ 1.4
DNMT3A-210ENST00000474807 WWC1Q8IX03 1113 aa23.79■■□□□ 1.4
DNMT3A-210ENST00000474807 TAF1DQ9H5J8 278 aaPredicted RBP23.79■■□□□ 1.4
DNMT3A-210ENST00000474807 MRS2Q9HD23 443 aa23.79■■□□□ 1.4
DNMT3A-210ENST00000474807 NCBP3Q53F19 620 aaKnown RBP23.78■■□□□ 1.4
DNMT3A-210ENST00000474807 TSPYL6Q8N831 410 aa23.78■■□□□ 1.4
DNMT3A-210ENST00000474807 FAM89AQ96GI7 184 aa23.78■■□□□ 1.4
DNMT3A-210ENST00000474807 GOLGA2Q08379 1002 aa23.77■■□□□ 1.4
DNMT3A-210ENST00000474807 CHADLQ6NUI6 762 aa23.77■■□□□ 1.4
DNMT3A-210ENST00000474807 DDX46Q7L014 1031 aaKnown RBP23.77■■□□□ 1.4
DNMT3A-210ENST00000474807 RIC3Q7Z5B4 369 aa23.77■■□□□ 1.4
DNMT3A-210ENST00000474807 SP8Q8IXZ3 490 aa23.77■■□□□ 1.4
DNMT3A-210ENST00000474807 GPC2Q8N158 579 aa23.77■■□□□ 1.4
DNMT3A-210ENST00000474807 TSR2Q969E8 191 aaKnown RBP23.77■■□□□ 1.4
DNMT3A-210ENST00000474807 KLRG1Q96E93 195 aa23.77■■□□□ 1.4
DNMT3A-210ENST00000474807 TMX4Q9H1E5 349 aaPredicted RBP23.77■■□□□ 1.4
DNMT3A-210ENST00000474807 PCNTO95613 3336 aa23.77■■□□□ 1.4
DNMT3A-210ENST00000474807 GRAPQ13588 217 aa23.76■■□□□ 1.39
DNMT3A-210ENST00000474807 CCDC30Q5VVM6 783 aa23.76■■□□□ 1.39
DNMT3A-210ENST00000474807 LARGE2Q8N3Y3 721 aa23.76■■□□□ 1.39
DNMT3A-210ENST00000474807 GRAPLQ8TC17 118 aaPredicted RBP23.76■■□□□ 1.39
DNMT3A-210ENST00000474807 CHMP4AQ9BY43 222 aa23.76■■□□□ 1.39
DNMT3A-210ENST00000474807 SF3B3Q15393 1217 aaKnown RBP23.75■■□□□ 1.39
DNMT3A-210ENST00000474807 RTFDC1Q9BY42 306 aaPredicted RBP23.75■■□□□ 1.39
DNMT3A-210ENST00000474807 VPS33BQ9H267 617 aa23.75■■□□□ 1.39
DNMT3A-210ENST00000474807 HACL1Q9UJ83 578 aa23.75■■□□□ 1.39
DNMT3A-210ENST00000474807 TAF1P21675 1872 aa23.75■■□□□ 1.39
DNMT3A-210ENST00000474807 EIF6P56537 245 aaKnown RBP23.74■■□□□ 1.39
DNMT3A-210ENST00000474807 LDHDQ86WU2 507 aa23.73■■□□□ 1.39
DNMT3A-210ENST00000474807 MYD88Q99836 296 aa23.73■■□□□ 1.39
DNMT3A-210ENST00000474807 IL16Q14005 1332 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms