RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 FSTP19883 344 aa2.2□□□□□ -2.06
HDAC9-222ENST00000474742 GTF2IP78347 998 aa2.2□□□□□ -2.06
HDAC9-222ENST00000474742 FLIIQ13045 1269 aa2.2□□□□□ -2.06
HDAC9-222ENST00000474742 COL9A3Q14050 684 aaPredicted RBP2.2□□□□□ -2.06
HDAC9-222ENST00000474742 MTFR1Q15390 333 aa2.2□□□□□ -2.06
HDAC9-222ENST00000474742 TEAD4Q15561 434 aa2.2□□□□□ -2.06
HDAC9-222ENST00000474742 PCSK7Q16549 785 aa2.2□□□□□ -2.06
HDAC9-222ENST00000474742 KRTAP5-3Q6L8H2 238 aa2.2□□□□□ -2.06
HDAC9-222ENST00000474742 ELMSAN1Q6PJG2 1045 aa2.2□□□□□ -2.06
HDAC9-222ENST00000474742 C20orf204Q6ZNR8 217 aa2.2□□□□□ -2.06
HDAC9-222ENST00000474742 FAM35AQ86V20 835 aa2.2□□□□□ -2.06
HDAC9-222ENST00000474742 KRTAP19-1Q8IUB9 90 aa2.2□□□□□ -2.06
HDAC9-222ENST00000474742 SLC9A9Q8IVB4 645 aa2.2□□□□□ -2.06
HDAC9-222ENST00000474742 SERBP1Q8NC51 408 aaKnown RBP eCLIP2.2□□□□□ -2.06
HDAC9-222ENST00000474742 HSH2DQ96JZ2 352 aa2.2□□□□□ -2.06
HDAC9-222ENST00000474742 UCN2Q96RP3 112 aa2.2□□□□□ -2.06
HDAC9-222ENST00000474742 DNAJB12Q9NXW2 375 aaKnown RBP2.2□□□□□ -2.06
HDAC9-222ENST00000474742 IQSEC3Q9UPP2 1182 aaPredicted RBP2.2□□□□□ -2.06
HDAC9-222ENST00000474742 HCN4Q9Y3Q4 1203 aa2.2□□□□□ -2.06
HDAC9-222ENST00000474742 EML1O00423 815 aa2.19□□□□□ -2.06
HDAC9-222ENST00000474742 SKIP12755 728 aa2.19□□□□□ -2.06
HDAC9-222ENST00000474742 UBTFP17480 764 aaKnown RBP2.19□□□□□ -2.06
HDAC9-222ENST00000474742 ARID4AP29374 1257 aaPredicted RBP2.19□□□□□ -2.06
HDAC9-222ENST00000474742 NOS3P29474 1203 aa2.19□□□□□ -2.06
HDAC9-222ENST00000474742 GRIK1P39086 918 aa2.19□□□□□ -2.06
HDAC9-222ENST00000474742 AFF1P51825 1210 aaKnown RBP2.19□□□□□ -2.06
HDAC9-222ENST00000474742 FZD5Q13467 585 aa2.19□□□□□ -2.06
HDAC9-222ENST00000474742 HIF1AQ16665 826 aa2.19□□□□□ -2.06
HDAC9-222ENST00000474742 WASHC4Q2M389 1173 aa2.19□□□□□ -2.06
HDAC9-222ENST00000474742 MSL1Q68DK7 614 aa2.19□□□□□ -2.06
HDAC9-222ENST00000474742 PRR23CQ6ZRP0 262 aa2.19□□□□□ -2.06
HDAC9-222ENST00000474742 SLC51AQ86UW1 340 aa2.19□□□□□ -2.06
HDAC9-222ENST00000474742 TNS4Q8IZW8 715 aa2.19□□□□□ -2.06
HDAC9-222ENST00000474742 DTWD1Q8N5C7 304 aa2.19□□□□□ -2.06
HDAC9-222ENST00000474742 ZDHHC1Q8WTX9 485 aa2.19□□□□□ -2.06
HDAC9-222ENST00000474742 MDFIQ99750 246 aa2.19□□□□□ -2.06
HDAC9-222ENST00000474742 PHACTR1Q9C0D0 580 aa2.19□□□□□ -2.06
HDAC9-222ENST00000474742 AKTIPQ9H8T0 292 aa2.19□□□□□ -2.06
HDAC9-222ENST00000474742 ZNF358Q9NW07 568 aa2.19□□□□□ -2.06
HDAC9-222ENST00000474742 GTF3C5Q9Y5Q8 519 aaPredicted RBP2.19□□□□□ -2.06
HDAC9-222ENST00000474742 A6NJR5 290 aa2.18□□□□□ -2.06
HDAC9-222ENST00000474742 GSC2O15499 205 aa2.18□□□□□ -2.06
HDAC9-222ENST00000474742 PPP1R12BO60237 982 aaPredicted RBP2.18□□□□□ -2.06
HDAC9-222ENST00000474742 DKK1O94907 266 aa2.18□□□□□ -2.06
HDAC9-222ENST00000474742 GLB1P16278 677 aa2.18□□□□□ -2.06
HDAC9-222ENST00000474742 EPB42P16452 691 aa2.18□□□□□ -2.06
HDAC9-222ENST00000474742 NFKB1P19838 968 aa2.18□□□□□ -2.06
HDAC9-222ENST00000474742 SOX11P35716 441 aa2.18□□□□□ -2.06
HDAC9-222ENST00000474742 GP2P55259 537 aaKnown RBP2.18□□□□□ -2.06
HDAC9-222ENST00000474742 PSMA6P60900 246 aaKnown RBP2.18□□□□□ -2.06
HDAC9-222ENST00000474742 MLLT1Q03111 559 aaPredicted RBP2.18□□□□□ -2.06
HDAC9-222ENST00000474742 CCINQ13939 588 aa2.18□□□□□ -2.06
HDAC9-222ENST00000474742 HDGFL1Q5TGJ6 251 aa2.18□□□□□ -2.06
HDAC9-222ENST00000474742 C1orf53Q5VUE5 145 aa2.18□□□□□ -2.06
HDAC9-222ENST00000474742 IGF2-ASQ6U949 168 aa2.18□□□□□ -2.06
HDAC9-222ENST00000474742 KRT25Q7Z3Z0 450 aa2.18□□□□□ -2.06
HDAC9-222ENST00000474742 PROSER2Q86WR7 435 aaPredicted RBP2.18□□□□□ -2.06
HDAC9-222ENST00000474742 FBXO11Q86XK2 927 aa2.18□□□□□ -2.06
HDAC9-222ENST00000474742 TRIM50Q86XT4 487 aa2.18□□□□□ -2.06
HDAC9-222ENST00000474742 WWC1Q8IX03 1113 aa2.18□□□□□ -2.06
HDAC9-222ENST00000474742 ZNF280CQ8ND82 737 aa2.18□□□□□ -2.06
HDAC9-222ENST00000474742 DCAF11Q8TEB1 546 aa2.18□□□□□ -2.06
HDAC9-222ENST00000474742 CHMP7Q8WUX9 453 aaPredicted RBP2.18□□□□□ -2.06
HDAC9-222ENST00000474742 NGLY1Q96IV0 654 aa2.18□□□□□ -2.06
HDAC9-222ENST00000474742 MEGF10Q96KG7 1140 aa2.18□□□□□ -2.06
HDAC9-222ENST00000474742 SUSD3Q96L08 255 aa2.18□□□□□ -2.06
HDAC9-222ENST00000474742 STOML1Q9UBI4 398 aa2.18□□□□□ -2.06
HDAC9-222ENST00000474742 GTF3C3Q9Y5Q9 886 aa2.18□□□□□ -2.06
HDAC9-222ENST00000474742 ZBTB7BO15156 539 aaPredicted RBP2.17□□□□□ -2.06
HDAC9-222ENST00000474742 ALX3O95076 343 aa2.17□□□□□ -2.06
HDAC9-222ENST00000474742 EIF2AK2P19525 551 aaKnown RBP2.17□□□□□ -2.06
HDAC9-222ENST00000474742 ATP1A2P50993 1020 aa2.17□□□□□ -2.06
HDAC9-222ENST00000474742 KCNQ4P56696 695 aa2.17□□□□□ -2.06
HDAC9-222ENST00000474742 TYRO3Q06418 890 aa2.17□□□□□ -2.06
HDAC9-222ENST00000474742 SH3PXD2AQ5TCZ1 1133 aa2.17□□□□□ -2.06
HDAC9-222ENST00000474742 BTLAQ7Z6A9 289 aa2.17□□□□□ -2.06
HDAC9-222ENST00000474742 ZNF295-AS1Q8N0V1 137 aa2.17□□□□□ -2.06
HDAC9-222ENST00000474742 DEPDC4Q8N2C3 294 aa2.17□□□□□ -2.06
HDAC9-222ENST00000474742 TPCN2Q8NHX9 752 aa2.17□□□□□ -2.06
HDAC9-222ENST00000474742 GLMNQ92990 594 aa2.17□□□□□ -2.06
HDAC9-222ENST00000474742 FMNL2Q96PY5 1086 aa2.17□□□□□ -2.06
HDAC9-222ENST00000474742 SSBP4Q9BWG4 385 aaPredicted RBP2.17□□□□□ -2.06
HDAC9-222ENST00000474742 MRPL18Q9H0U6 180 aaKnown RBP2.17□□□□□ -2.06
HDAC9-222ENST00000474742 RBSNQ9H1K0 784 aa2.17□□□□□ -2.06
HDAC9-222ENST00000474742 C1orf115Q9H7X2 142 aa2.17□□□□□ -2.06
HDAC9-222ENST00000474742 EFCC1Q9HA90 598 aa2.17□□□□□ -2.06
HDAC9-222ENST00000474742 NAGPAQ9UK23 515 aa2.17□□□□□ -2.06
HDAC9-222ENST00000474742 ZNF777Q9ULD5 760 aaPredicted RBP2.17□□□□□ -2.06
HDAC9-222ENST00000474742 RAXQ9Y2V3 346 aa2.17□□□□□ -2.06
HDAC9-222ENST00000474742 PCDHGA11Q9Y5H2 935 aa2.17□□□□□ -2.06
HDAC9-222ENST00000474742 OAS3Q9Y6K5 1087 aaKnown RBP2.17□□□□□ -2.06
HDAC9-222ENST00000474742 DHX15O43143 795 aaKnown RBP2.16□□□□□ -2.06
HDAC9-222ENST00000474742 RAD21O60216 631 aa2.16□□□□□ -2.06
HDAC9-222ENST00000474742 LZTS3O60299 673 aaPredicted RBP2.16□□□□□ -2.06
HDAC9-222ENST00000474742 IGLV1-40P01703 118 aa2.16□□□□□ -2.06
HDAC9-222ENST00000474742 CD97P48960 835 aa2.16□□□□□ -2.06
HDAC9-222ENST00000474742 CLDN10P78369 228 aa2.16□□□□□ -2.06
HDAC9-222ENST00000474742 NCOA4Q13772 614 aa2.16□□□□□ -2.06
HDAC9-222ENST00000474742 PERM1Q5SV97 790 aa2.16□□□□□ -2.06
HDAC9-222ENST00000474742 GDF6Q6KF10 455 aaPredicted RBP2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms