RNA–Protein interactions for RNA: ENST00000474612.1

NOTCH4-204, Transcript of notch 4, humanhuman

TSL 5

Gene NOTCH4, Length 5,267 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-204ENST00000474612 IL27Q8NEV9 243 aa20.83■□□□□ 0.93
NOTCH4-204ENST00000474612 USP16Q9Y5T5 823 aa20.83■□□□□ 0.93
NOTCH4-204ENST00000474612 NEBLO76041 1014 aa20.83■□□□□ 0.92
NOTCH4-204ENST00000474612 MYCNP04198 464 aaPredicted RBP20.83■□□□□ 0.92
NOTCH4-204ENST00000474612 EYA3Q99504 573 aa20.83■□□□□ 0.92
NOTCH4-204ENST00000474612 NF2P35240 595 aa20.82■□□□□ 0.92
NOTCH4-204ENST00000474612 MAP3K5Q99683 1374 aa20.82■□□□□ 0.92
NOTCH4-204ENST00000474612 KRT23Q9C075 422 aa20.82■□□□□ 0.92
NOTCH4-204ENST00000474612 ZRANB1Q9UGI0 708 aa20.82■□□□□ 0.92
NOTCH4-204ENST00000474612 NEK1Q96PY6 1258 aa20.82■□□□□ 0.92
NOTCH4-204ENST00000474612 SHANK2Q9UPX8 1470 aa20.82■□□□□ 0.92
NOTCH4-204ENST00000474612 BMP2KLQ5H9B9 411 aa20.82■□□□□ 0.92
NOTCH4-204ENST00000474612 TCP11L1Q9NUJ3 509 aa20.82■□□□□ 0.92
NOTCH4-204ENST00000474612 NAA16Q6N069 864 aaPredicted RBP20.81■□□□□ 0.92
NOTCH4-204ENST00000474612 VAT1LQ9HCJ6 419 aa20.81■□□□□ 0.92
NOTCH4-204ENST00000474612 EIF4G3O43432 1585 aaKnown RBP20.81■□□□□ 0.92
NOTCH4-204ENST00000474612 PATL2C9JE40 543 aaKnown RBP20.81■□□□□ 0.92
NOTCH4-204ENST00000474612 CETN2P41208 172 aa20.81■□□□□ 0.92
NOTCH4-204ENST00000474612 CLEC11AQ9Y240 323 aa20.81■□□□□ 0.92
NOTCH4-204ENST00000474612 ZFYVE9O95405 1425 aa20.81■□□□□ 0.92
NOTCH4-204ENST00000474612 YTHDC2Q9H6S0 1430 aaKnown RBP20.81■□□□□ 0.92
NOTCH4-204ENST00000474612 HOXC9P31274 260 aa20.81■□□□□ 0.92
NOTCH4-204ENST00000474612 FKBP15Q5T1M5 1219 aa20.81■□□□□ 0.92
NOTCH4-204ENST00000474612 TMTC2Q8N394 836 aa20.81■□□□□ 0.92
NOTCH4-204ENST00000474612 UBA5Q9GZZ9 404 aa20.81■□□□□ 0.92
NOTCH4-204ENST00000474612 STX8Q9UNK0 236 aa20.8■□□□□ 0.92
NOTCH4-204ENST00000474612 CCT2P78371 535 aaKnown RBP20.8■□□□□ 0.92
NOTCH4-204ENST00000474612 CALML4Q96GE6 196 aa20.8■□□□□ 0.92
NOTCH4-204ENST00000474612 EYA1Q99502 592 aa20.8■□□□□ 0.92
NOTCH4-204ENST00000474612 ANKRD2Q9GZV1 360 aa20.8■□□□□ 0.92
NOTCH4-204ENST00000474612 MCM5P33992 734 aa20.8■□□□□ 0.92
NOTCH4-204ENST00000474612 METAP2P50579 478 aaKnown RBP eCLIP20.8■□□□□ 0.92
NOTCH4-204ENST00000474612 HAND2P61296 217 aa20.8■□□□□ 0.92
NOTCH4-204ENST00000474612 TRAPPC3LQ5T215 181 aa20.8■□□□□ 0.92
NOTCH4-204ENST00000474612 CNNM2Q9H8M5 875 aa20.8■□□□□ 0.92
NOTCH4-204ENST00000474612 EIF2AK4Q9P2K8 1649 aaKnown RBP20.8■□□□□ 0.92
NOTCH4-204ENST00000474612 ZNF771Q7L3S4 317 aaPredicted RBP20.8■□□□□ 0.92
NOTCH4-204ENST00000474612 ESR2Q92731 530 aa20.8■□□□□ 0.92
NOTCH4-204ENST00000474612 TSPY3P0CV98 308 aa20.79■□□□□ 0.92
NOTCH4-204ENST00000474612 TSPY8P0CW00 308 aa20.79■□□□□ 0.92
NOTCH4-204ENST00000474612 CCDC150Q8NCX0 1101 aa20.79■□□□□ 0.92
NOTCH4-204ENST00000474612 STK32BQ9NY57 414 aa20.79■□□□□ 0.92
NOTCH4-204ENST00000474612 POLR3AO14802 1390 aaPredicted RBP20.79■□□□□ 0.92
NOTCH4-204ENST00000474612 PLCG2P16885 1265 aa20.79■□□□□ 0.92
NOTCH4-204ENST00000474612 AMPD3Q01432 767 aa20.79■□□□□ 0.92
NOTCH4-204ENST00000474612 GUCY1B3Q02153 619 aa20.79■□□□□ 0.92
NOTCH4-204ENST00000474612 PYM1Q9BRP8 204 aaKnown RBP20.79■□□□□ 0.92
NOTCH4-204ENST00000474612 SOS1Q07889 1333 aaPredicted RBP20.79■□□□□ 0.92
NOTCH4-204ENST00000474612 PTPRKQ15262 1439 aa20.79■□□□□ 0.92
NOTCH4-204ENST00000474612 CTTNBP2Q8WZ74 1663 aa20.79■□□□□ 0.92
NOTCH4-204ENST00000474612 CFAP100Q494V2 611 aa20.79■□□□□ 0.92
NOTCH4-204ENST00000474612 ANO10Q9NW15 660 aa20.79■□□□□ 0.92
NOTCH4-204ENST00000474612 WDR62O43379 1518 aa20.79■□□□□ 0.92
NOTCH4-204ENST00000474612 EPB41L2O43491 1005 aaKnown RBP20.78■□□□□ 0.92
NOTCH4-204ENST00000474612 MEIS3Q99687 375 aa20.78■□□□□ 0.92
NOTCH4-204ENST00000474612 STXBP4Q6ZWJ1 553 aa20.78■□□□□ 0.92
NOTCH4-204ENST00000474612 MICU3Q86XE3 530 aa20.78■□□□□ 0.92
NOTCH4-204ENST00000474612 IRS4O14654 1257 aaPredicted RBP20.78■□□□□ 0.92
NOTCH4-204ENST00000474612 MCM4P33991 863 aa20.78■□□□□ 0.92
NOTCH4-204ENST00000474612 GNAQP50148 359 aa20.78■□□□□ 0.92
NOTCH4-204ENST00000474612 WTAPQ15007 396 aa20.78■□□□□ 0.92
NOTCH4-204ENST00000474612 TTC22Q5TAA0 569 aa20.78■□□□□ 0.92
NOTCH4-204ENST00000474612 SLC4A4Q9Y6R1 1079 aa20.78■□□□□ 0.92
NOTCH4-204ENST00000474612 F8W031 263 aaPredicted RBP20.77■□□□□ 0.92
NOTCH4-204ENST00000474612 ATP8B2P98198 1209 aa20.77■□□□□ 0.92
NOTCH4-204ENST00000474612 TAF4BQ92750 862 aa20.77■□□□□ 0.92
NOTCH4-204ENST00000474612 NSFL1CQ9UNZ2 370 aaKnown RBP20.77■□□□□ 0.92
NOTCH4-204ENST00000474612 RNMTO43148 476 aaKnown RBP20.77■□□□□ 0.92
NOTCH4-204ENST00000474612 IQCEQ6IPM2 695 aa20.77■□□□□ 0.92
NOTCH4-204ENST00000474612 TMEM87AQ8NBN3 555 aa20.77■□□□□ 0.92
NOTCH4-204ENST00000474612 ORC3Q9UBD5 711 aaPredicted RBP20.77■□□□□ 0.92
NOTCH4-204ENST00000474612 NEFHP12036 1026 aa20.77■□□□□ 0.92
NOTCH4-204ENST00000474612 VPS36Q86VN1 386 aa20.77■□□□□ 0.92
NOTCH4-204ENST00000474612 TCOF1Q13428 1488 aaKnown RBP20.77■□□□□ 0.92
NOTCH4-204ENST00000474612 C8orf58Q8NAV2 365 aa20.77■□□□□ 0.91
NOTCH4-204ENST00000474612 GNPATO15228 680 aa20.76■□□□□ 0.91
NOTCH4-204ENST00000474612 CTAGE5O15320 804 aa20.76■□□□□ 0.91
NOTCH4-204ENST00000474612 NBPF7P0C2Y1 421 aaPredicted RBP20.76■□□□□ 0.91
NOTCH4-204ENST00000474612 IQSEC3Q9UPP2 1182 aaPredicted RBP20.76■□□□□ 0.91
NOTCH4-204ENST00000474612 MAP3K19Q56UN5 1328 aa20.76■□□□□ 0.91
NOTCH4-204ENST00000474612 SSR1P43307 286 aaKnown RBP20.76■□□□□ 0.91
NOTCH4-204ENST00000474612 CETN1Q12798 172 aa20.76■□□□□ 0.91
NOTCH4-204ENST00000474612 JAKMIP3Q5VZ66 844 aa20.76■□□□□ 0.91
NOTCH4-204ENST00000474612 KIAA1328Q86T90 577 aa20.76■□□□□ 0.91
NOTCH4-204ENST00000474612 MRPL50Q8N5N7 158 aaKnown RBP20.75■□□□□ 0.91
NOTCH4-204ENST00000474612 ANKRD44Q8N8A2 993 aa20.75■□□□□ 0.91
NOTCH4-204ENST00000474612 LRRC27Q9C0I9 530 aa20.75■□□□□ 0.91
NOTCH4-204ENST00000474612 FILIP1Q7Z7B0 1213 aa20.75■□□□□ 0.91
NOTCH4-204ENST00000474612 CNNM3Q8NE01 707 aa20.75■□□□□ 0.91
NOTCH4-204ENST00000474612 UBA7P41226 1012 aa20.74■□□□□ 0.91
NOTCH4-204ENST00000474612 HDAC1Q13547 482 aaPredicted RBP20.74■□□□□ 0.91
NOTCH4-204ENST00000474612 KLHL10Q6JEL2 608 aa20.74■□□□□ 0.91
NOTCH4-204ENST00000474612 CCNL1Q9UK58 526 aaPredicted RBP20.74■□□□□ 0.91
NOTCH4-204ENST00000474612 SAMM50Q9Y512 469 aa20.74■□□□□ 0.91
NOTCH4-204ENST00000474612 GOLGA6L10A6NI86 522 aa20.74■□□□□ 0.91
NOTCH4-204ENST00000474612 RBM17Q96I25 401 aaKnown RBP20.74■□□□□ 0.91
NOTCH4-204ENST00000474612 SLC9C2Q5TAH2 1124 aa20.74■□□□□ 0.91
NOTCH4-204ENST00000474612 TBC1D9Q6ZT07 1266 aa20.74■□□□□ 0.91
NOTCH4-204ENST00000474612 SLC26A6Q9BXS9 759 aa20.74■□□□□ 0.91
NOTCH4-204ENST00000474612 GNAT2P19087 354 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms