RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 LSG1Q9H089 658 aaKnown RBP11.94□□□□□ -0.5
USP39-214ENST00000474572 ANO2Q9NQ90 1003 aa11.94□□□□□ -0.5
USP39-214ENST00000474572 CWC25Q9NXE8 425 aaPredicted RBP11.94□□□□□ -0.5
USP39-214ENST00000474572 PALD1Q9ULE6 856 aa11.94□□□□□ -0.5
USP39-214ENST00000474572 SPEF2Q9C093 1822 aa11.94□□□□□ -0.5
USP39-214ENST00000474572 SLIT2O94813 1529 aa11.94□□□□□ -0.5
USP39-214ENST00000474572 JCADQ9P266 1359 aa11.93□□□□□ -0.5
USP39-214ENST00000474572 ATP5J2-PTCD1G3V325 749 aa11.93□□□□□ -0.5
USP39-214ENST00000474572 PTCD1O75127 700 aaKnown RBP11.93□□□□□ -0.5
USP39-214ENST00000474572 CYP2E1P05181 493 aaPredicted RBP11.93□□□□□ -0.5
USP39-214ENST00000474572 CDCA7Q9BWT1 371 aaPredicted RBP11.93□□□□□ -0.5
USP39-214ENST00000474572 THRAP3Q9Y2W1 955 aaKnown RBP11.93□□□□□ -0.5
USP39-214ENST00000474572 NUP98P52948 1817 aa11.93□□□□□ -0.5
USP39-214ENST00000474572 MYH3P11055 1940 aa11.92□□□□□ -0.5
USP39-214ENST00000474572 HIP1O00291 1037 aa11.92□□□□□ -0.5
USP39-214ENST00000474572 MAP4K4O95819 1239 aaPredicted RBP11.92□□□□□ -0.5
USP39-214ENST00000474572 CUL4AQ13619 759 aa11.92□□□□□ -0.5
USP39-214ENST00000474572 DNAJC10Q8IXB1 793 aa11.92□□□□□ -0.5
USP39-214ENST00000474572 RUFY2Q8WXA3 655 aa11.92□□□□□ -0.5
USP39-214ENST00000474572 KCNB2Q92953 911 aa11.92□□□□□ -0.5
USP39-214ENST00000474572 CWC22Q9HCG8 908 aaKnown RBP11.92□□□□□ -0.5
USP39-214ENST00000474572 GPR108Q9NPR9 543 aa11.92□□□□□ -0.5
USP39-214ENST00000474572 ASAP1Q9ULH1 1129 aa11.92□□□□□ -0.5
USP39-214ENST00000474572 SPATA31A1Q5TZJ5 1347 aa11.91□□□□□ -0.5
USP39-214ENST00000474572 LRP5O75197 1615 aa11.91□□□□□ -0.5
USP39-214ENST00000474572 DDX11L8A8MPP1 907 aa11.91□□□□□ -0.5
USP39-214ENST00000474572 TCIRG1Q13488 830 aa11.91□□□□□ -0.5
USP39-214ENST00000474572 KLHDC4Q8TBB5 520 aa11.91□□□□□ -0.5
USP39-214ENST00000474572 TNPO1Q92973 898 aaKnown RBP11.91□□□□□ -0.5
USP39-214ENST00000474572 PLA2G12BQ9BX93 195 aa11.91□□□□□ -0.5
USP39-214ENST00000474572 TLR7Q9NYK1 1049 aaKnown RBP11.91□□□□□ -0.5
USP39-214ENST00000474572 ZNF609O15014 1411 aa11.91□□□□□ -0.5
USP39-214ENST00000474572 COL5A3P25940 1745 aaPredicted RBP11.91□□□□□ -0.5
USP39-214ENST00000474572 MED23Q9ULK4 1368 aa11.91□□□□□ -0.5
USP39-214ENST00000474572 LAMB2P55268 1798 aa11.9□□□□□ -0.5
USP39-214ENST00000474572 EXOC5O00471 708 aa11.9□□□□□ -0.5
USP39-214ENST00000474572 ATP5JP18859 108 aa11.9□□□□□ -0.5
USP39-214ENST00000474572 TNNI3KQ59H18 835 aa11.9□□□□□ -0.5
USP39-214ENST00000474572 LMBR1LQ6UX01 489 aa11.9□□□□□ -0.5
USP39-214ENST00000474572 SLC4A9Q96Q91 983 aa11.9□□□□□ -0.5
USP39-214ENST00000474572 CCDC8Q9H0W5 538 aaPredicted RBP11.9□□□□□ -0.5
USP39-214ENST00000474572 SIL1Q9H173 461 aa11.9□□□□□ -0.5
USP39-214ENST00000474572 FPGT-TNNI3KV9GXZ4 949 aa11.9□□□□□ -0.5
USP39-214ENST00000474572 MAP3K15Q6ZN16 1313 aa11.89□□□□□ -0.51
USP39-214ENST00000474572 CDHR2Q9BYE9 1310 aa11.89□□□□□ -0.51
USP39-214ENST00000474572 CIAO1O76071 339 aa11.89□□□□□ -0.51
USP39-214ENST00000474572 STARD3NLO95772 234 aa11.89□□□□□ -0.51
USP39-214ENST00000474572 PCCAP05165 728 aaPredicted RBP11.89□□□□□ -0.51
USP39-214ENST00000474572 HSP90AA1P07900 732 aaKnown RBP11.89□□□□□ -0.51
USP39-214ENST00000474572 CYP19A1P11511 503 aaPredicted RBP11.89□□□□□ -0.51
USP39-214ENST00000474572 PTMSP20962 102 aa11.89□□□□□ -0.51
USP39-214ENST00000474572 NUCB2P80303 420 aa11.89□□□□□ -0.51
USP39-214ENST00000474572 ATG9AQ7Z3C6 839 aa11.89□□□□□ -0.51
USP39-214ENST00000474572 TICAM2Q86XR7 235 aa11.89□□□□□ -0.51
USP39-214ENST00000474572 JARID2Q92833 1246 aaPredicted RBP11.89□□□□□ -0.51
USP39-214ENST00000474572 INTS4Q96HW7 963 aaKnown RBP11.89□□□□□ -0.51
USP39-214ENST00000474572 ZBTB3Q9H5J0 574 aa11.89□□□□□ -0.51
USP39-214ENST00000474572 DIAPH3Q9NSV4 1193 aa11.89□□□□□ -0.51
USP39-214ENST00000474572 DBNLQ9UJU6 430 aaKnown RBP11.89□□□□□ -0.51
USP39-214ENST00000474572 FBXO3Q9UK99 471 aa11.89□□□□□ -0.51
USP39-214ENST00000474572 SNX14Q9Y5W7 946 aa11.89□□□□□ -0.51
USP39-214ENST00000474572 BCORQ6W2J9 1755 aa11.89□□□□□ -0.51
USP39-214ENST00000474572 NEK4P51957 841 aa11.88□□□□□ -0.51
USP39-214ENST00000474572 TFCP2Q12800 502 aa11.88□□□□□ -0.51
USP39-214ENST00000474572 CWC27Q6UX04 472 aaKnown RBP11.88□□□□□ -0.51
USP39-214ENST00000474572 GIGYF2Q6Y7W6 1299 aaKnown RBP11.88□□□□□ -0.51
USP39-214ENST00000474572 TMX3Q96JJ7 454 aa11.88□□□□□ -0.51
USP39-214ENST00000474572 TTC14Q96N46 770 aa11.88□□□□□ -0.51
USP39-214ENST00000474572 GBP4Q96PP9 640 aa11.88□□□□□ -0.51
USP39-214ENST00000474572 ARAP2Q8WZ64 1704 aa11.88□□□□□ -0.51
USP39-214ENST00000474572 SPATA31A5Q5VU36 1347 aa11.87□□□□□ -0.51
USP39-214ENST00000474572 CCDC171Q6TFL3 1326 aa11.87□□□□□ -0.51
USP39-214ENST00000474572 SPATA31A7Q8IWB4 1347 aa11.87□□□□□ -0.51
USP39-214ENST00000474572 IL15P40933 162 aaPredicted RBP11.87□□□□□ -0.51
USP39-214ENST00000474572 HSP90AB3PQ58FF7 597 aa11.87□□□□□ -0.51
USP39-214ENST00000474572 KIF6Q6ZMV9 814 aa11.87□□□□□ -0.51
USP39-214ENST00000474572 BARGINQ6ZT62 677 aa11.87□□□□□ -0.51
USP39-214ENST00000474572 TM6SF1Q9BZW5 370 aa11.87□□□□□ -0.51
USP39-214ENST00000474572 PALLDQ8WX93 1383 aa11.87□□□□□ -0.51
USP39-214ENST00000474572 EYA2O00167 538 aa11.86□□□□□ -0.51
USP39-214ENST00000474572 CSF1RP07333 972 aa11.86□□□□□ -0.51
USP39-214ENST00000474572 SSFA2P28290 1259 aa11.86□□□□□ -0.51
USP39-214ENST00000474572 IL6STP40189 918 aaPredicted RBP11.86□□□□□ -0.51
USP39-214ENST00000474572 NMIQ13287 307 aaPredicted RBP11.86□□□□□ -0.51
USP39-214ENST00000474572 NECTIN1Q15223 517 aa11.86□□□□□ -0.51
USP39-214ENST00000474572 KIAA1211Q6ZU35 1233 aa11.86□□□□□ -0.51
USP39-214ENST00000474572 ZBTB38Q8NAP3 1195 aaPredicted RBP11.86□□□□□ -0.51
USP39-214ENST00000474572 MAP4K1Q92918 833 aa11.86□□□□□ -0.51
USP39-214ENST00000474572 HAUS7Q99871 368 aa11.86□□□□□ -0.51
USP39-214ENST00000474572 BOLA2Q9H3K6 86 aa11.86□□□□□ -0.51
USP39-214ENST00000474572 FOXD4L1Q9NU39 408 aa11.86□□□□□ -0.51
USP39-214ENST00000474572 RPAP1Q9BWH6 1393 aaPredicted RBP11.85□□□□□ -0.51
USP39-214ENST00000474572 ERVV-1B6SEH8 477 aa11.85□□□□□ -0.51
USP39-214ENST00000474572 PTH1RQ03431 593 aa11.85□□□□□ -0.51
USP39-214ENST00000474572 RASEFQ8IZ41 740 aa11.85□□□□□ -0.51
USP39-214ENST00000474572 ZGPATQ8N5A5 531 aaKnown RBP11.85□□□□□ -0.51
USP39-214ENST00000474572 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.85□□□□□ -0.51
USP39-214ENST00000474572 DBNDD2Q9BQY9 259 aa11.85□□□□□ -0.51
USP39-214ENST00000474572 ZBTB1Q9Y2K1 713 aa11.85□□□□□ -0.51
USP39-214ENST00000474572 DDX60Q8IY21 1712 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms