RNA–Protein interactions for RNA: ENST00000474475.1

TNFRSF9-202, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-202ENST00000474475 C16orf71Q8IYS4 520 aaPredicted RBP11.57□□□□□ -0.56
TNFRSF9-202ENST00000474475 NGEFQ8N5V2 710 aa11.57□□□□□ -0.56
TNFRSF9-202ENST00000474475 ZNF579Q8NAF0 562 aaKnown RBP11.57□□□□□ -0.56
TNFRSF9-202ENST00000474475 KIF12Q96FN5 646 aa11.57□□□□□ -0.56
TNFRSF9-202ENST00000474475 RRP7AQ9Y3A4 280 aaKnown RBP11.57□□□□□ -0.56
TNFRSF9-202ENST00000474475 PCDHB13Q9Y5F0 798 aa11.57□□□□□ -0.56
TNFRSF9-202ENST00000474475 MYBBP1AQ9BQG0 1328 aaKnown RBP11.57□□□□□ -0.56
TNFRSF9-202ENST00000474475 NUP98P52948 1817 aa11.56□□□□□ -0.56
TNFRSF9-202ENST00000474475 KLRG2A4D1S0 409 aaPredicted RBP11.56□□□□□ -0.56
TNFRSF9-202ENST00000474475 GLTPD2A6NH11 291 aa11.56□□□□□ -0.56
TNFRSF9-202ENST00000474475 TMPOP42166 694 aaKnown RBP11.56□□□□□ -0.56
TNFRSF9-202ENST00000474475 APLP1P51693 650 aa11.56□□□□□ -0.56
TNFRSF9-202ENST00000474475 TTLL7Q6ZT98 887 aa11.56□□□□□ -0.56
TNFRSF9-202ENST00000474475 DICER1Q9UPY3 1922 aaKnown RBP11.56□□□□□ -0.56
TNFRSF9-202ENST00000474475 MAP3K15Q6ZN16 1313 aa11.56□□□□□ -0.56
TNFRSF9-202ENST00000474475 LTBP3Q9NS15 1303 aa11.56□□□□□ -0.56
TNFRSF9-202ENST00000474475 WDR90Q96KV7 1748 aa11.55□□□□□ -0.56
TNFRSF9-202ENST00000474475 ERVV-1B6SEH8 477 aa11.55□□□□□ -0.56
TNFRSF9-202ENST00000474475 MYL6BP14649 208 aa11.55□□□□□ -0.56
TNFRSF9-202ENST00000474475 C7orf43Q8WVR3 580 aa11.55□□□□□ -0.56
TNFRSF9-202ENST00000474475 PHF12Q96QT6 1004 aa11.55□□□□□ -0.56
TNFRSF9-202ENST00000474475 TAOK3Q9H2K8 898 aa11.55□□□□□ -0.56
TNFRSF9-202ENST00000474475 TSPYL4Q9UJ04 414 aa11.55□□□□□ -0.56
TNFRSF9-202ENST00000474475 ABCC12Q96J65 1359 aa11.54□□□□□ -0.56
TNFRSF9-202ENST00000474475 MAP3K13O43283 966 aa11.54□□□□□ -0.56
TNFRSF9-202ENST00000474475 NPR1P16066 1061 aa11.54□□□□□ -0.56
TNFRSF9-202ENST00000474475 FSTL1Q12841 308 aa11.54□□□□□ -0.56
TNFRSF9-202ENST00000474475 ERFEQ4G0M1 354 aa11.54□□□□□ -0.56
TNFRSF9-202ENST00000474475 CCDC146Q8IYE0 955 aa11.54□□□□□ -0.56
TNFRSF9-202ENST00000474475 ZBTB3Q9H5J0 574 aa11.54□□□□□ -0.56
TNFRSF9-202ENST00000474475 ERBB4Q15303 1308 aa11.54□□□□□ -0.56
TNFRSF9-202ENST00000474475 POTECB2RU33 542 aa11.53□□□□□ -0.56
TNFRSF9-202ENST00000474475 VEGFAP15692 232 aaPredicted RBP11.53□□□□□ -0.56
TNFRSF9-202ENST00000474475 PDIA6Q15084 440 aa11.53□□□□□ -0.56
TNFRSF9-202ENST00000474475 SOGA3Q5TF21 947 aa11.53□□□□□ -0.56
TNFRSF9-202ENST00000474475 KIF6Q6ZMV9 814 aa11.53□□□□□ -0.56
TNFRSF9-202ENST00000474475 LRP10Q7Z4F1 713 aa11.53□□□□□ -0.56
TNFRSF9-202ENST00000474475 NUTM1Q86Y26 1132 aa11.53□□□□□ -0.56
TNFRSF9-202ENST00000474475 DNAJC5GQ8N7S2 189 aa11.53□□□□□ -0.56
TNFRSF9-202ENST00000474475 BABAM1Q9NWV8 329 aa11.53□□□□□ -0.56
TNFRSF9-202ENST00000474475 UBN2Q6ZU65 1347 aa11.53□□□□□ -0.56
TNFRSF9-202ENST00000474475 EIF2S2P20042 333 aaKnown RBP11.52□□□□□ -0.57
TNFRSF9-202ENST00000474475 GPTP24298 496 aa11.52□□□□□ -0.57
TNFRSF9-202ENST00000474475 GTF2E1P29083 439 aaPredicted RBP11.52□□□□□ -0.57
TNFRSF9-202ENST00000474475 HTRA3P83110 453 aa11.52□□□□□ -0.57
TNFRSF9-202ENST00000474475 LMOD3Q0VAK6 560 aa11.52□□□□□ -0.57
TNFRSF9-202ENST00000474475 NEUROD2Q15784 382 aa11.52□□□□□ -0.57
TNFRSF9-202ENST00000474475 OLFM4Q6UX06 510 aa11.52□□□□□ -0.57
TNFRSF9-202ENST00000474475 ZNF34Q8IZ26 560 aa11.52□□□□□ -0.57
TNFRSF9-202ENST00000474475 SMC1BQ8NDV3 1235 aa11.52□□□□□ -0.57
TNFRSF9-202ENST00000474475 IBTKQ9P2D0 1353 aaPredicted RBP11.52□□□□□ -0.57
TNFRSF9-202ENST00000474475 ANXA1P04083 346 aa11.51□□□□□ -0.57
TNFRSF9-202ENST00000474475 CLCN6P51797 869 aa11.51□□□□□ -0.57
TNFRSF9-202ENST00000474475 PDAP1Q13442 181 aaKnown RBP11.51□□□□□ -0.57
TNFRSF9-202ENST00000474475 PROSER3Q2NL68 480 aa11.51□□□□□ -0.57
TNFRSF9-202ENST00000474475 CRY2Q49AN0 593 aa11.51□□□□□ -0.57
TNFRSF9-202ENST00000474475 CCDC93Q567U6 631 aa11.51□□□□□ -0.57
TNFRSF9-202ENST00000474475 SUSD4Q5VX71 490 aa11.51□□□□□ -0.57
TNFRSF9-202ENST00000474475 DPY19L2Q6NUT2 758 aa11.51□□□□□ -0.57
TNFRSF9-202ENST00000474475 GIGYF2Q6Y7W6 1299 aaKnown RBP11.51□□□□□ -0.57
TNFRSF9-202ENST00000474475 HS6ST3Q8IZP7 471 aa11.51□□□□□ -0.57
TNFRSF9-202ENST00000474475 RUNDC1Q96C34 613 aa11.51□□□□□ -0.57
TNFRSF9-202ENST00000474475 NYXQ9GZU5 481 aa11.51□□□□□ -0.57
TNFRSF9-202ENST00000474475 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.51□□□□□ -0.57
TNFRSF9-202ENST00000474475 PCDHB8Q9UN66 801 aa11.51□□□□□ -0.57
TNFRSF9-202ENST00000474475 ADAMTS8Q9UP79 889 aa11.51□□□□□ -0.57
TNFRSF9-202ENST00000474475 TRIM35Q9UPQ4 493 aa11.51□□□□□ -0.57
TNFRSF9-202ENST00000474475 RIC1Q4ADV7 1423 aa11.51□□□□□ -0.57
TNFRSF9-202ENST00000474475 SNED1Q8TER0 1413 aa11.51□□□□□ -0.57
TNFRSF9-202ENST00000474475 STK25O00506 426 aa11.5□□□□□ -0.57
TNFRSF9-202ENST00000474475 NTSR2O95665 410 aa11.5□□□□□ -0.57
TNFRSF9-202ENST00000474475 FKBP4Q02790 459 aaKnown RBP eCLIP11.5□□□□□ -0.57
TNFRSF9-202ENST00000474475 WDR43Q15061 677 aaKnown RBP eCLIP11.5□□□□□ -0.57
TNFRSF9-202ENST00000474475 KRT24Q2M2I5 525 aa11.5□□□□□ -0.57
TNFRSF9-202ENST00000474475 BBXQ8WY36 941 aaPredicted RBP11.5□□□□□ -0.57
TNFRSF9-202ENST00000474475 PRKRIP1Q9H875 184 aaPredicted RBP11.5□□□□□ -0.57
TNFRSF9-202ENST00000474475 CHL1O00533 1208 aa11.49□□□□□ -0.57
TNFRSF9-202ENST00000474475 DDNO94850 711 aaPredicted RBP11.49□□□□□ -0.57
TNFRSF9-202ENST00000474475 ALDH1B1P30837 517 aa11.49□□□□□ -0.57
TNFRSF9-202ENST00000474475 HOXA10P31260 410 aaPredicted RBP11.49□□□□□ -0.57
TNFRSF9-202ENST00000474475 IFNL1Q8IU54 200 aa11.49□□□□□ -0.57
TNFRSF9-202ENST00000474475 NECTIN2Q92692 538 aa11.49□□□□□ -0.57
TNFRSF9-202ENST00000474475 ZNF277Q9NRM2 450 aaPredicted RBP11.49□□□□□ -0.57
TNFRSF9-202ENST00000474475 ANKRD36CQ5JPF3 1778 aa11.49□□□□□ -0.57
TNFRSF9-202ENST00000474475 C3orf67Q6ZVT6 689 aa11.48□□□□□ -0.57
TNFRSF9-202ENST00000474475 RTKN2Q8IZC4 609 aa11.48□□□□□ -0.57
TNFRSF9-202ENST00000474475 LAS1LQ9Y4W2 734 aaKnown RBP11.48□□□□□ -0.57
TNFRSF9-202ENST00000474475 ZNF541Q9H0D2 1346 aa11.47□□□□□ -0.57
TNFRSF9-202ENST00000474475 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.47□□□□□ -0.57
TNFRSF9-202ENST00000474475 PARP10Q53GL7 1025 aa11.47□□□□□ -0.57
TNFRSF9-202ENST00000474475 COPS6Q7L5N1 327 aa11.47□□□□□ -0.57
TNFRSF9-202ENST00000474475 PPP1R42Q7Z4L9 355 aa11.47□□□□□ -0.57
TNFRSF9-202ENST00000474475 SLC51AQ86UW1 340 aa11.47□□□□□ -0.57
TNFRSF9-202ENST00000474475 SYNE4Q8N205 404 aa11.47□□□□□ -0.57
TNFRSF9-202ENST00000474475 XAGE3Q8WTP9 111 aa11.47□□□□□ -0.57
TNFRSF9-202ENST00000474475 RPGRQ92834 1020 aaKnown RBP11.47□□□□□ -0.57
TNFRSF9-202ENST00000474475 KLRG1Q96E93 195 aa11.47□□□□□ -0.57
TNFRSF9-202ENST00000474475 ZFP91Q96JP5 570 aaPredicted RBP11.47□□□□□ -0.57
TNFRSF9-202ENST00000474475 COL4A5P29400 1685 aa11.46□□□□□ -0.57
TNFRSF9-202ENST00000474475 POTEIP0CG38 1075 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms