RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 NECTIN2Q92692 538 aa26.53■■□□□ 1.84
PDLIM4-206ENST00000474421 CFAP44Q96MT7 982 aa26.53■■□□□ 1.84
PDLIM4-206ENST00000474421 RNF123Q5XPI4 1314 aa26.52■■□□□ 1.84
PDLIM4-206ENST00000474421 UTP14AQ9BVJ6 771 aaKnown RBP26.52■■□□□ 1.84
PDLIM4-206ENST00000474421 CALD1Q05682 793 aaKnown RBP26.51■■□□□ 1.83
PDLIM4-206ENST00000474421 GRIPAP1Q4V328 841 aa26.51■■□□□ 1.83
PDLIM4-206ENST00000474421 XAGE3Q8WTP9 111 aa26.51■■□□□ 1.83
PDLIM4-206ENST00000474421 RBM17Q96I25 401 aaKnown RBP26.51■■□□□ 1.83
PDLIM4-206ENST00000474421 ANKRD36CQ5JPF3 1778 aa26.51■■□□□ 1.83
PDLIM4-206ENST00000474421 AIMP1Q12904 312 aaKnown RBP26.5■■□□□ 1.83
PDLIM4-206ENST00000474421 KRT24Q2M2I5 525 aa26.5■■□□□ 1.83
PDLIM4-206ENST00000474421 HDGFL1Q5TGJ6 251 aa26.5■■□□□ 1.83
PDLIM4-206ENST00000474421 NLRP3Q96P20 1036 aa26.5■■□□□ 1.83
PDLIM4-206ENST00000474421 CRAMP1Q96RY5 1269 aa26.5■■□□□ 1.83
PDLIM4-206ENST00000474421 POTECB2RU33 542 aa26.49■■□□□ 1.83
PDLIM4-206ENST00000474421 ZNF277Q9NRM2 450 aaPredicted RBP26.49■■□□□ 1.83
PDLIM4-206ENST00000474421 SLC10A5Q5PT55 438 aa26.48■■□□□ 1.83
PDLIM4-206ENST00000474421 OLFM4Q6UX06 510 aa26.48■■□□□ 1.83
PDLIM4-206ENST00000474421 PSMD1Q99460 953 aa26.48■■□□□ 1.83
PDLIM4-206ENST00000474421 APAF1O14727 1248 aa26.47■■□□□ 1.83
PDLIM4-206ENST00000474421 DDNO94850 711 aaPredicted RBP26.47■■□□□ 1.83
PDLIM4-206ENST00000474421 TCIRG1Q13488 830 aa26.47■■□□□ 1.83
PDLIM4-206ENST00000474421 SYNE4Q8N205 404 aa26.47■■□□□ 1.83
PDLIM4-206ENST00000474421 DNAJC5GQ8N7S2 189 aa26.47■■□□□ 1.83
PDLIM4-206ENST00000474421 CHPF2Q9P2E5 772 aa26.47■■□□□ 1.83
PDLIM4-206ENST00000474421 DBF4Q9UBU7 674 aaPredicted RBP26.47■■□□□ 1.83
PDLIM4-206ENST00000474421 IQCA1LA6NCM1 817 aa26.46■■□□□ 1.83
PDLIM4-206ENST00000474421 IARSP41252 1262 aaKnown RBP26.46■■□□□ 1.83
PDLIM4-206ENST00000474421 NLRP10Q86W26 655 aa26.45■■□□□ 1.82
PDLIM4-206ENST00000474421 TMX4Q9H1E5 349 aaPredicted RBP26.45■■□□□ 1.82
PDLIM4-206ENST00000474421 MBIPQ9NS73 344 aa26.45■■□□□ 1.82
PDLIM4-206ENST00000474421 IFT57Q9NWB7 429 aa26.45■■□□□ 1.82
PDLIM4-206ENST00000474421 SCN4AP35499 1836 aa26.44■■□□□ 1.82
PDLIM4-206ENST00000474421 ZNF853P0CG23 659 aa26.44■■□□□ 1.82
PDLIM4-206ENST00000474421 GNAI1P63096 354 aa26.44■■□□□ 1.82
PDLIM4-206ENST00000474421 DUSP27Q5VZP5 1158 aa26.44■■□□□ 1.82
PDLIM4-206ENST00000474421 L3MBTL3Q96JM7 780 aaPredicted RBP26.44■■□□□ 1.82
PDLIM4-206ENST00000474421 HYPKQ9NX55 129 aa26.44■■□□□ 1.82
PDLIM4-206ENST00000474421 SNED1Q8TER0 1413 aa26.44■■□□□ 1.82
PDLIM4-206ENST00000474421 PPEF1O14829 653 aaPredicted RBP26.43■■□□□ 1.82
PDLIM4-206ENST00000474421 PLBD2Q8NHP8 589 aa26.43■■□□□ 1.82
PDLIM4-206ENST00000474421 C3orf67Q6ZVT6 689 aa26.42■■□□□ 1.82
PDLIM4-206ENST00000474421 JDP2Q8WYK2 163 aa26.42■■□□□ 1.82
PDLIM4-206ENST00000474421 TRMT112Q9UI30 125 aaKnown RBP26.42■■□□□ 1.82
PDLIM4-206ENST00000474421 SH3TC1Q8TE82 1336 aa26.41■■□□□ 1.82
PDLIM4-206ENST00000474421 ANKRD13DQ6ZTN6 518 aa26.41■■□□□ 1.82
PDLIM4-206ENST00000474421 FZD9O00144 591 aa26.4■■□□□ 1.82
PDLIM4-206ENST00000474421 KLRG1Q96E93 195 aa26.4■■□□□ 1.82
PDLIM4-206ENST00000474421 CHMP4AQ9BY43 222 aa26.4■■□□□ 1.82
PDLIM4-206ENST00000474421 CHADLQ6NUI6 762 aa26.39■■□□□ 1.82
PDLIM4-206ENST00000474421 ZNF541Q9H0D2 1346 aa26.39■■□□□ 1.81
PDLIM4-206ENST00000474421 HTRA3P83110 453 aa26.38■■□□□ 1.81
PDLIM4-206ENST00000474421 ATP6V0A2Q9Y487 856 aa26.38■■□□□ 1.81
PDLIM4-206ENST00000474421 LAMB2P55268 1798 aa26.38■■□□□ 1.81
PDLIM4-206ENST00000474421 BBOX1O75936 387 aa26.37■■□□□ 1.81
PDLIM4-206ENST00000474421 HCLS1P14317 486 aaPredicted RBP26.37■■□□□ 1.81
PDLIM4-206ENST00000474421 ABCC4O15439 1325 aa26.37■■□□□ 1.81
PDLIM4-206ENST00000474421 TCERG1O14776 1098 aaKnown RBP26.36■■□□□ 1.81
PDLIM4-206ENST00000474421 DDX46Q7L014 1031 aaKnown RBP26.36■■□□□ 1.81
PDLIM4-206ENST00000474421 GPC2Q8N158 579 aa26.36■■□□□ 1.81
PDLIM4-206ENST00000474421 TAF1DQ9H5J8 278 aaPredicted RBP26.36■■□□□ 1.81
PDLIM4-206ENST00000474421 EIF6P56537 245 aaKnown RBP26.35■■□□□ 1.81
PDLIM4-206ENST00000474421 LDHDQ86WU2 507 aa26.35■■□□□ 1.81
PDLIM4-206ENST00000474421 LARGE2Q8N3Y3 721 aa26.35■■□□□ 1.81
PDLIM4-206ENST00000474421 ISCA1Q9BUE6 129 aa26.35■■□□□ 1.81
PDLIM4-206ENST00000474421 VPS33BQ9H267 617 aa26.35■■□□□ 1.81
PDLIM4-206ENST00000474421 HACL1Q9UJ83 578 aa26.35■■□□□ 1.81
PDLIM4-206ENST00000474421 SUPT20HQ8NEM7 779 aa26.34■■□□□ 1.81
PDLIM4-206ENST00000474421 GOLGA2Q08379 1002 aa26.33■■□□□ 1.81
PDLIM4-206ENST00000474421 TRIM28Q13263 835 aaKnown RBP26.33■■□□□ 1.81
PDLIM4-206ENST00000474421 JMYQ8N9B5 988 aa26.33■■□□□ 1.81
PDLIM4-206ENST00000474421 TMC4Q7Z404 712 aa26.32■■□□□ 1.8
PDLIM4-206ENST00000474421 PNMA8AQ86V59 439 aaPredicted RBP26.32■■□□□ 1.8
PDLIM4-206ENST00000474421 SP8Q8IXZ3 490 aa26.32■■□□□ 1.8
PDLIM4-206ENST00000474421 ELL2O00472 640 aaPredicted RBP26.31■■□□□ 1.8
PDLIM4-206ENST00000474421 POTEIP0CG38 1075 aa26.31■■□□□ 1.8
PDLIM4-206ENST00000474421 POTEJP0CG39 1038 aa26.31■■□□□ 1.8
PDLIM4-206ENST00000474421 GRAPQ13588 217 aa26.31■■□□□ 1.8
PDLIM4-206ENST00000474421 RIC3Q7Z5B4 369 aa26.31■■□□□ 1.8
PDLIM4-206ENST00000474421 NIM1KQ8IY84 436 aa26.31■■□□□ 1.8
PDLIM4-206ENST00000474421 GRAPLQ8TC17 118 aaPredicted RBP26.31■■□□□ 1.8
PDLIM4-206ENST00000474421 ATP5J2-PTCD1G3V325 749 aa26.3■■□□□ 1.8
PDLIM4-206ENST00000474421 PPIP5K2O43314 1243 aa26.3■■□□□ 1.8
PDLIM4-206ENST00000474421 EPHX2P34913 555 aa26.3■■□□□ 1.8
PDLIM4-206ENST00000474421 CCDC27Q2M243 656 aa26.3■■□□□ 1.8
PDLIM4-206ENST00000474421 DDX60Q8IY21 1712 aaKnown RBP26.29■■□□□ 1.8
PDLIM4-206ENST00000474421 ZNF316A6NFI3 1004 aaPredicted RBP26.29■■□□□ 1.8
PDLIM4-206ENST00000474421 CCDC184Q52MB2 194 aa26.29■■□□□ 1.8
PDLIM4-206ENST00000474421 EAPPQ56P03 285 aaPredicted RBP26.29■■□□□ 1.8
PDLIM4-206ENST00000474421 CCDC30Q5VVM6 783 aa26.29■■□□□ 1.8
PDLIM4-206ENST00000474421 DPP8Q6V1X1 898 aaPredicted RBP26.29■■□□□ 1.8
PDLIM4-206ENST00000474421 C8orf58Q8NAV2 365 aa26.29■■□□□ 1.8
PDLIM4-206ENST00000474421 RTFDC1Q9BY42 306 aaPredicted RBP26.29■■□□□ 1.8
PDLIM4-206ENST00000474421 COL4A5P29400 1685 aa26.28■■□□□ 1.8
PDLIM4-206ENST00000474421 ANP32CO43423 234 aa26.28■■□□□ 1.8
PDLIM4-206ENST00000474421 HSP90B1P14625 803 aaKnown RBP26.28■■□□□ 1.8
PDLIM4-206ENST00000474421 MPNDQ8N594 471 aa26.28■■□□□ 1.8
PDLIM4-206ENST00000474421 FAM89AQ96GI7 184 aa26.28■■□□□ 1.8
PDLIM4-206ENST00000474421 GJA3Q9Y6H8 435 aa26.28■■□□□ 1.8
PDLIM4-206ENST00000474421 DDX58O95786 925 aaKnown RBP26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms