RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 PLBD2Q8NHP8 589 aa24.03■■□□□ 1.44
CCDC171-206ENST00000474193 RBM17Q96I25 401 aaKnown RBP24.03■■□□□ 1.44
CCDC171-206ENST00000474193 RNF123Q5XPI4 1314 aa24.03■■□□□ 1.44
CCDC171-206ENST00000474193 COL11A2P13942 1736 aaPredicted RBP24.02■■□□□ 1.44
CCDC171-206ENST00000474193 NTSR2O95665 410 aa24.02■■□□□ 1.44
CCDC171-206ENST00000474193 WWC1Q8IX03 1113 aa24.02■■□□□ 1.44
CCDC171-206ENST00000474193 RTKN2Q8IZC4 609 aa24.02■■□□□ 1.44
CCDC171-206ENST00000474193 CCDC30Q5VVM6 783 aa24.01■■□□□ 1.43
CCDC171-206ENST00000474193 TRMT112Q9UI30 125 aaKnown RBP24.01■■□□□ 1.43
CCDC171-206ENST00000474193 LTBP3Q9NS15 1303 aa24.01■■□□□ 1.43
CCDC171-206ENST00000474193 KIF3CO14782 793 aa24■■□□□ 1.43
CCDC171-206ENST00000474193 GOLGA2Q08379 1002 aa24■■□□□ 1.43
CCDC171-206ENST00000474193 CRY2Q49AN0 593 aa24■■□□□ 1.43
CCDC171-206ENST00000474193 CC2D2BQ6DHV5 1058 aa24■■□□□ 1.43
CCDC171-206ENST00000474193 SLX4Q8IY92 1834 aa24■■□□□ 1.43
CCDC171-206ENST00000474193 TOMM70O94826 608 aa23.99■■□□□ 1.43
CCDC171-206ENST00000474193 SLC10A5Q5PT55 438 aa23.99■■□□□ 1.43
CCDC171-206ENST00000474193 RIC3Q7Z5B4 369 aa23.99■■□□□ 1.43
CCDC171-206ENST00000474193 NLRP10Q86W26 655 aa23.99■■□□□ 1.43
CCDC171-206ENST00000474193 NMRK2Q9NPI5 230 aa23.99■■□□□ 1.43
CCDC171-206ENST00000474193 CACNA1SQ13698 1873 aa23.98■■□□□ 1.43
CCDC171-206ENST00000474193 GLTPD2A6NH11 291 aa23.98■■□□□ 1.43
CCDC171-206ENST00000474193 GRIPAP1Q4V328 841 aa23.98■■□□□ 1.43
CCDC171-206ENST00000474193 C7orf43Q8WVR3 580 aa23.98■■□□□ 1.43
CCDC171-206ENST00000474193 IL16Q14005 1332 aa23.98■■□□□ 1.43
CCDC171-206ENST00000474193 ABCC12Q96J65 1359 aa23.98■■□□□ 1.43
CCDC171-206ENST00000474193 RIC1Q4ADV7 1423 aa23.98■■□□□ 1.43
CCDC171-206ENST00000474193 DDX58O95786 925 aaKnown RBP23.97■■□□□ 1.43
CCDC171-206ENST00000474193 HOXA10P31260 410 aaPredicted RBP23.97■■□□□ 1.43
CCDC171-206ENST00000474193 CCDC88AQ3V6T2 1871 aa23.97■■□□□ 1.43
CCDC171-206ENST00000474193 C8orf58Q8NAV2 365 aa23.97■■□□□ 1.43
CCDC171-206ENST00000474193 SH3TC1Q8TE82 1336 aa23.97■■□□□ 1.43
CCDC171-206ENST00000474193 CRAMP1Q96RY5 1269 aa23.97■■□□□ 1.43
CCDC171-206ENST00000474193 STK31Q9BXU1 1019 aa23.97■■□□□ 1.43
CCDC171-206ENST00000474193 RRAGCQ9HB90 399 aa23.97■■□□□ 1.43
CCDC171-206ENST00000474193 FKBP4Q02790 459 aaKnown RBP eCLIP23.96■■□□□ 1.43
CCDC171-206ENST00000474193 SALL2Q9Y467 1007 aaPredicted RBP23.96■■□□□ 1.43
CCDC171-206ENST00000474193 ARFGEF2Q9Y6D5 1785 aa23.96■■□□□ 1.43
CCDC171-206ENST00000474193 WDR63Q8IWG1 891 aa23.95■■□□□ 1.42
CCDC171-206ENST00000474193 FER1L6Q2WGJ9 1857 aa23.95■■□□□ 1.42
CCDC171-206ENST00000474193 HSP90B1P14625 803 aaKnown RBP23.94■■□□□ 1.42
CCDC171-206ENST00000474193 VEGFAP15692 232 aaPredicted RBP23.94■■□□□ 1.42
CCDC171-206ENST00000474193 PRELPP51888 382 aa23.94■■□□□ 1.42
CCDC171-206ENST00000474193 TSR2Q969E8 191 aaKnown RBP23.94■■□□□ 1.42
CCDC171-206ENST00000474193 DDX46Q7L014 1031 aaKnown RBP23.93■■□□□ 1.42
CCDC171-206ENST00000474193 ATP5J2-PTCD1G3V325 749 aa23.92■■□□□ 1.42
CCDC171-206ENST00000474193 TWISTNBQ3B726 338 aaPredicted RBP23.92■■□□□ 1.42
CCDC171-206ENST00000474193 RBM46Q8TBY0 533 aaKnown RBP23.92■■□□□ 1.42
CCDC171-206ENST00000474193 PHAXQ9H814 394 aaKnown RBP23.92■■□□□ 1.42
CCDC171-206ENST00000474193 ANKRD36CQ5JPF3 1778 aa23.91■■□□□ 1.42
CCDC171-206ENST00000474193 PPEF1O14829 653 aaPredicted RBP23.91■■□□□ 1.42
CCDC171-206ENST00000474193 BBOX1O75936 387 aa23.91■■□□□ 1.42
CCDC171-206ENST00000474193 HCLS1P14317 486 aaPredicted RBP23.91■■□□□ 1.42
CCDC171-206ENST00000474193 TRIM28Q13263 835 aaKnown RBP23.91■■□□□ 1.42
CCDC171-206ENST00000474193 SYNE4Q8N205 404 aa23.91■■□□□ 1.42
CCDC171-206ENST00000474193 ISCA1Q9BUE6 129 aa23.91■■□□□ 1.42
CCDC171-206ENST00000474193 TCERG1O14776 1098 aaKnown RBP23.9■■□□□ 1.42
CCDC171-206ENST00000474193 HSPA6P17066 643 aa23.9■■□□□ 1.42
CCDC171-206ENST00000474193 TSPYL6Q8N831 410 aa23.9■■□□□ 1.42
CCDC171-206ENST00000474193 JDP2Q8WYK2 163 aa23.9■■□□□ 1.42
CCDC171-206ENST00000474193 DICER1Q9UPY3 1922 aaKnown RBP23.89■■□□□ 1.42
CCDC171-206ENST00000474193 PSMD1Q99460 953 aa23.89■■□□□ 1.41
CCDC171-206ENST00000474193 ZNF277Q9NRM2 450 aaPredicted RBP23.89■■□□□ 1.41
CCDC171-206ENST00000474193 IARSP41252 1262 aaKnown RBP23.88■■□□□ 1.41
CCDC171-206ENST00000474193 OLFM4Q6UX06 510 aa23.88■■□□□ 1.41
CCDC171-206ENST00000474193 TNRC6CQ9HCJ0 1690 aaKnown RBP23.88■■□□□ 1.41
CCDC171-206ENST00000474193 NEXNQ0ZGT2 675 aa23.87■■□□□ 1.41
CCDC171-206ENST00000474193 FSTL1Q12841 308 aa23.87■■□□□ 1.41
CCDC171-206ENST00000474193 C3orf67Q6ZVT6 689 aa23.87■■□□□ 1.41
CCDC171-206ENST00000474193 FAM89AQ96GI7 184 aa23.87■■□□□ 1.41
CCDC171-206ENST00000474193 MYD88Q99836 296 aa23.87■■□□□ 1.41
CCDC171-206ENST00000474193 TMC4Q7Z404 712 aa23.86■■□□□ 1.41
CCDC171-206ENST00000474193 CCDC191Q8NCU4 936 aa23.86■■□□□ 1.41
CCDC171-206ENST00000474193 MYH16Q9H6N6 1097 aa23.86■■□□□ 1.41
CCDC171-206ENST00000474193 ATP6V0A2Q9Y487 856 aa23.86■■□□□ 1.41
CCDC171-206ENST00000474193 TIAM2Q8IVF5 1701 aa23.86■■□□□ 1.41
CCDC171-206ENST00000474193 SLC4A2P04920 1241 aa23.85■■□□□ 1.41
CCDC171-206ENST00000474193 SMC1BQ8NDV3 1235 aa23.85■■□□□ 1.41
CCDC171-206ENST00000474193 SUPT20HQ8NEM7 779 aa23.85■■□□□ 1.41
CCDC171-206ENST00000474193 ZNF428Q96B54 188 aa23.85■■□□□ 1.41
CCDC171-206ENST00000474193 METTL22Q9BUU2 404 aaPredicted RBP23.85■■□□□ 1.41
CCDC171-206ENST00000474193 ABCC4O15439 1325 aa23.84■■□□□ 1.41
CCDC171-206ENST00000474193 IRS4O14654 1257 aaPredicted RBP23.84■■□□□ 1.41
CCDC171-206ENST00000474193 RTL5Q5HYW3 569 aaPredicted RBP23.84■■□□□ 1.41
CCDC171-206ENST00000474193 KSR2Q6VAB6 950 aa23.84■■□□□ 1.41
CCDC171-206ENST00000474193 SP8Q8IXZ3 490 aa23.84■■□□□ 1.41
CCDC171-206ENST00000474193 ZBTB38Q8NAP3 1195 aaPredicted RBP23.84■■□□□ 1.41
CCDC171-206ENST00000474193 CWC25Q9NXE8 425 aaPredicted RBP23.84■■□□□ 1.41
CCDC171-206ENST00000474193 IQCA1LA6NCM1 817 aa23.83■■□□□ 1.41
CCDC171-206ENST00000474193 DDNO94850 711 aaPredicted RBP23.83■■□□□ 1.41
CCDC171-206ENST00000474193 GRAPQ13588 217 aa23.83■■□□□ 1.41
CCDC171-206ENST00000474193 GRAPLQ8TC17 118 aaPredicted RBP23.83■■□□□ 1.41
CCDC171-206ENST00000474193 VPS33BQ9H267 617 aa23.83■■□□□ 1.41
CCDC171-206ENST00000474193 MAP3K2Q9Y2U5 619 aa23.83■■□□□ 1.41
CCDC171-206ENST00000474193 FANCIQ9NVI1 1328 aa23.83■■□□□ 1.4
CCDC171-206ENST00000474193 APLP1P51693 650 aa23.82■■□□□ 1.4
CCDC171-206ENST00000474193 EIF6P56537 245 aaKnown RBP23.82■■□□□ 1.4
CCDC171-206ENST00000474193 HNRNPUQ00839 825 aaKnown RBP eCLIP23.82■■□□□ 1.4
CCDC171-206ENST00000474193 LARGE2Q8N3Y3 721 aa23.82■■□□□ 1.4
CCDC171-206ENST00000474193 PI4KAP2A4QPH2 592 aa23.81■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms