RNA–Protein interactions for RNA: ENST00000474144.5

TMEM54-204, Transcript of transmembrane protein 54, humanhuman

TSL 3

Gene TMEM54, Length 748 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-204ENST00000474144 GLTPD2A6NH11 291 aa25.85■■□□□ 1.73
TMEM54-204ENST00000474144 ELL2O00472 640 aaPredicted RBP25.85■■□□□ 1.73
TMEM54-204ENST00000474144 ALDH1B1P30837 517 aa25.85■■□□□ 1.73
TMEM54-204ENST00000474144 CCDC93Q567U6 631 aa25.85■■□□□ 1.73
TMEM54-204ENST00000474144 ZNF428Q96B54 188 aa25.85■■□□□ 1.73
TMEM54-204ENST00000474144 UTP14AQ9BVJ6 771 aaKnown RBP25.85■■□□□ 1.73
TMEM54-204ENST00000474144 RIC1Q4ADV7 1423 aa25.85■■□□□ 1.73
TMEM54-204ENST00000474144 CALD1Q05682 793 aaKnown RBP25.84■■□□□ 1.73
TMEM54-204ENST00000474144 TCIRG1Q13488 830 aa25.84■■□□□ 1.73
TMEM54-204ENST00000474144 DBF4Q9UBU7 674 aaPredicted RBP25.84■■□□□ 1.73
TMEM54-204ENST00000474144 HSPA6P17066 643 aa25.83■■□□□ 1.73
TMEM54-204ENST00000474144 NLRP10Q86W26 655 aa25.83■■□□□ 1.73
TMEM54-204ENST00000474144 HSP90AB3PQ58FF7 597 aa25.82■■□□□ 1.72
TMEM54-204ENST00000474144 SLC51AQ86UW1 340 aa25.82■■□□□ 1.72
TMEM54-204ENST00000474144 SYNE4Q8N205 404 aa25.82■■□□□ 1.72
TMEM54-204ENST00000474144 C8orf58Q8NAV2 365 aa25.82■■□□□ 1.72
TMEM54-204ENST00000474144 RPGRQ92834 1020 aaKnown RBP25.82■■□□□ 1.72
TMEM54-204ENST00000474144 C16orf71Q8IYS4 520 aaPredicted RBP25.81■■□□□ 1.72
TMEM54-204ENST00000474144 PLBD2Q8NHP8 589 aa25.81■■□□□ 1.72
TMEM54-204ENST00000474144 HOXA10P31260 410 aaPredicted RBP25.8■■□□□ 1.72
TMEM54-204ENST00000474144 FKBP4Q02790 459 aaKnown RBP eCLIP25.8■■□□□ 1.72
TMEM54-204ENST00000474144 SLC10A5Q5PT55 438 aa25.8■■□□□ 1.72
TMEM54-204ENST00000474144 ANKRD13DQ6ZTN6 518 aa25.8■■□□□ 1.72
TMEM54-204ENST00000474144 CEP350Q5VT06 3117 aa25.79■■□□□ 1.72
TMEM54-204ENST00000474144 NLRP3Q96P20 1036 aa25.79■■□□□ 1.72
TMEM54-204ENST00000474144 ZNF277Q9NRM2 450 aaPredicted RBP25.79■■□□□ 1.72
TMEM54-204ENST00000474144 HYPKQ9NX55 129 aa25.79■■□□□ 1.72
TMEM54-204ENST00000474144 LAMB2P55268 1798 aa25.78■■□□□ 1.72
TMEM54-204ENST00000474144 WWC1Q8IX03 1113 aa25.78■■□□□ 1.72
TMEM54-204ENST00000474144 RTKN2Q8IZC4 609 aa25.78■■□□□ 1.72
TMEM54-204ENST00000474144 TSPYL6Q8N831 410 aa25.78■■□□□ 1.72
TMEM54-204ENST00000474144 RBM46Q8TBY0 533 aaKnown RBP25.78■■□□□ 1.72
TMEM54-204ENST00000474144 TSR2Q969E8 191 aaKnown RBP25.78■■□□□ 1.72
TMEM54-204ENST00000474144 RBM17Q96I25 401 aaKnown RBP25.78■■□□□ 1.72
TMEM54-204ENST00000474144 PHAXQ9H814 394 aaKnown RBP25.78■■□□□ 1.72
TMEM54-204ENST00000474144 SNED1Q8TER0 1413 aa25.78■■□□□ 1.72
TMEM54-204ENST00000474144 POTECB2RU33 542 aa25.77■■□□□ 1.72
TMEM54-204ENST00000474144 TCERG1O14776 1098 aaKnown RBP25.77■■□□□ 1.72
TMEM54-204ENST00000474144 HCLS1P14317 486 aaPredicted RBP25.77■■□□□ 1.72
TMEM54-204ENST00000474144 CCDC27Q2M243 656 aa25.77■■□□□ 1.72
TMEM54-204ENST00000474144 TRMT112Q9UI30 125 aaKnown RBP25.77■■□□□ 1.72
TMEM54-204ENST00000474144 ATP5J2-PTCD1G3V325 749 aa25.76■■□□□ 1.71
TMEM54-204ENST00000474144 DPY19L2Q6NUT2 758 aa25.76■■□□□ 1.71
TMEM54-204ENST00000474144 CRAMP1Q96RY5 1269 aa25.76■■□□□ 1.71
TMEM54-204ENST00000474144 WDR90Q96KV7 1748 aa25.75■■□□□ 1.71
TMEM54-204ENST00000474144 VEGFAP15692 232 aaPredicted RBP25.75■■□□□ 1.71
TMEM54-204ENST00000474144 ISCA1Q9BUE6 129 aa25.75■■□□□ 1.71
TMEM54-204ENST00000474144 RNF123Q5XPI4 1314 aa25.74■■□□□ 1.71
TMEM54-204ENST00000474144 SH3TC1Q8TE82 1336 aa25.74■■□□□ 1.71
TMEM54-204ENST00000474144 PPEF1O14829 653 aaPredicted RBP25.74■■□□□ 1.71
TMEM54-204ENST00000474144 DDNO94850 711 aaPredicted RBP25.74■■□□□ 1.71
TMEM54-204ENST00000474144 SALL2Q9Y467 1007 aaPredicted RBP25.74■■□□□ 1.71
TMEM54-204ENST00000474144 ABCC4O15439 1325 aa25.72■■□□□ 1.71
TMEM54-204ENST00000474144 IARSP41252 1262 aaKnown RBP25.72■■□□□ 1.71
TMEM54-204ENST00000474144 RIC3Q7Z5B4 369 aa25.72■■□□□ 1.71
TMEM54-204ENST00000474144 DDX60Q8IY21 1712 aaKnown RBP25.71■■□□□ 1.71
TMEM54-204ENST00000474144 FAM89AQ96GI7 184 aa25.71■■□□□ 1.71
TMEM54-204ENST00000474144 PSMD1Q99460 953 aa25.71■■□□□ 1.71
TMEM54-204ENST00000474144 ZNF541Q9H0D2 1346 aa25.7■■□□□ 1.71
TMEM54-204ENST00000474144 FSTL1Q12841 308 aa25.7■■□□□ 1.7
TMEM54-204ENST00000474144 CC2D2BQ6DHV5 1058 aa25.7■■□□□ 1.7
TMEM54-204ENST00000474144 TAF1P21675 1872 aa25.7■■□□□ 1.7
TMEM54-204ENST00000474144 COL4A5P29400 1685 aa25.69■■□□□ 1.7
TMEM54-204ENST00000474144 GOLGA2Q08379 1002 aa25.69■■□□□ 1.7
TMEM54-204ENST00000474144 RTL5Q5HYW3 569 aaPredicted RBP25.69■■□□□ 1.7
TMEM54-204ENST00000474144 CCDC30Q5VVM6 783 aa25.69■■□□□ 1.7
TMEM54-204ENST00000474144 APLP1P51693 650 aa25.68■■□□□ 1.7
TMEM54-204ENST00000474144 FAM9BQ8IZU0 186 aa25.68■■□□□ 1.7
TMEM54-204ENST00000474144 NCBP3Q53F19 620 aaKnown RBP25.67■■□□□ 1.7
TMEM54-204ENST00000474144 SMC1BQ8NDV3 1235 aa25.67■■□□□ 1.7
TMEM54-204ENST00000474144 MYD88Q99836 296 aa25.67■■□□□ 1.7
TMEM54-204ENST00000474144 ATP6V0A2Q9Y487 856 aa25.67■■□□□ 1.7
TMEM54-204ENST00000474144 IL16Q14005 1332 aa25.66■■□□□ 1.7
TMEM54-204ENST00000474144 TRIM28Q13263 835 aaKnown RBP25.66■■□□□ 1.7
TMEM54-204ENST00000474144 FZD9O00144 591 aa25.65■■□□□ 1.7
TMEM54-204ENST00000474144 HTRA3P83110 453 aa25.65■■□□□ 1.7
TMEM54-204ENST00000474144 TWISTNBQ3B726 338 aaPredicted RBP25.65■■□□□ 1.7
TMEM54-204ENST00000474144 DDX46Q7L014 1031 aaKnown RBP25.65■■□□□ 1.7
TMEM54-204ENST00000474144 GRIPAP1Q4V328 841 aa25.64■■□□□ 1.7
TMEM54-204ENST00000474144 FANCIQ9NVI1 1328 aa25.63■■□□□ 1.69
TMEM54-204ENST00000474144 BBOX1O75936 387 aa25.63■■□□□ 1.69
TMEM54-204ENST00000474144 GRAPQ13588 217 aa25.63■■□□□ 1.69
TMEM54-204ENST00000474144 GRAPLQ8TC17 118 aaPredicted RBP25.63■■□□□ 1.69
TMEM54-204ENST00000474144 COL4A1P02462 1669 aa25.63■■□□□ 1.69
TMEM54-204ENST00000474144 IRS4O14654 1257 aaPredicted RBP25.62■■□□□ 1.69
TMEM54-204ENST00000474144 POTEIP0CG38 1075 aa25.62■■□□□ 1.69
TMEM54-204ENST00000474144 POTEJP0CG39 1038 aa25.62■■□□□ 1.69
TMEM54-204ENST00000474144 JDP2Q8WYK2 163 aa25.62■■□□□ 1.69
TMEM54-204ENST00000474144 L3MBTL3Q96JM7 780 aaPredicted RBP25.62■■□□□ 1.69
TMEM54-204ENST00000474144 SF3B3Q15393 1217 aaKnown RBP25.61■■□□□ 1.69
TMEM54-204ENST00000474144 G2E3Q7L622 706 aa25.61■■□□□ 1.69
TMEM54-204ENST00000474144 WDR63Q8IWG1 891 aa25.61■■□□□ 1.69
TMEM54-204ENST00000474144 SP8Q8IXZ3 490 aa25.61■■□□□ 1.69
TMEM54-204ENST00000474144 LARGE2Q8N3Y3 721 aa25.61■■□□□ 1.69
TMEM54-204ENST00000474144 JARID2Q92833 1246 aaPredicted RBP25.61■■□□□ 1.69
TMEM54-204ENST00000474144 METTL22Q9BUU2 404 aaPredicted RBP25.61■■□□□ 1.69
TMEM54-204ENST00000474144 CHMP4AQ9BY43 222 aa25.61■■□□□ 1.69
TMEM54-204ENST00000474144 TMX4Q9H1E5 349 aaPredicted RBP25.61■■□□□ 1.69
TMEM54-204ENST00000474144 SPINK5Q9NQ38 1064 aaPredicted RBP25.61■■□□□ 1.69
TMEM54-204ENST00000474144 MAP3K2Q9Y2U5 619 aa25.61■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms