RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 MADDQ8WXG6 1647 aa4.17□□□□□ -1.74
CALD1-216ENST00000473714 ALBP02768 609 aa4.16□□□□□ -1.74
CALD1-216ENST00000473714 NID1P14543 1247 aa4.16□□□□□ -1.74
CALD1-216ENST00000473714 TATP17735 454 aaPredicted RBP4.16□□□□□ -1.74
CALD1-216ENST00000473714 NBPF1Q3BBV0 1214 aa4.16□□□□□ -1.74
CALD1-216ENST00000473714 C8orf86Q6ZUL3 223 aa4.16□□□□□ -1.74
CALD1-216ENST00000473714 MDFIQ99750 246 aa4.16□□□□□ -1.74
CALD1-216ENST00000473714 KDM4CQ9H3R0 1056 aa4.16□□□□□ -1.74
CALD1-216ENST00000473714 USP21Q9UK80 565 aa4.16□□□□□ -1.74
CALD1-216ENST00000473714 STARD13Q9Y3M8 1113 aa4.16□□□□□ -1.74
CALD1-216ENST00000473714 PLB1Q6P1J6 1458 aa4.16□□□□□ -1.74
CALD1-216ENST00000473714 KIAA0586Q9BVV6 1533 aa4.16□□□□□ -1.74
CALD1-216ENST00000473714 BCORL1Q5H9F3 1711 aa4.15□□□□□ -1.74
CALD1-216ENST00000473714 MAP3K4Q9Y6R4 1608 aa4.15□□□□□ -1.74
CALD1-216ENST00000473714 RFC5P40937 340 aa4.15□□□□□ -1.75
CALD1-216ENST00000473714 CDCA7Q9BWT1 371 aaPredicted RBP4.15□□□□□ -1.75
CALD1-216ENST00000473714 ETNK1Q9HBU6 452 aa4.15□□□□□ -1.75
CALD1-216ENST00000473714 STRN4Q9NRL3 753 aa4.15□□□□□ -1.75
CALD1-216ENST00000473714 GRIN2AQ12879 1464 aa4.15□□□□□ -1.75
CALD1-216ENST00000473714 RIMS1Q86UR5 1692 aaKnown RBP4.15□□□□□ -1.75
CALD1-216ENST00000473714 ASXL2Q76L83 1435 aa4.14□□□□□ -1.75
CALD1-216ENST00000473714 A0A0A0MRY4 1105 aa4.14□□□□□ -1.75
CALD1-216ENST00000473714 LILRB5O75023 590 aa4.14□□□□□ -1.75
CALD1-216ENST00000473714 SSTR4P31391 388 aa4.14□□□□□ -1.75
CALD1-216ENST00000473714 NR1H3Q13133 447 aa4.14□□□□□ -1.75
CALD1-216ENST00000473714 NEUROD1Q13562 356 aa4.14□□□□□ -1.75
CALD1-216ENST00000473714 SAMD5Q5TGI4 173 aa4.14□□□□□ -1.75
CALD1-216ENST00000473714 POTEAQ6S8J7 498 aa4.14□□□□□ -1.75
CALD1-216ENST00000473714 SHISA2Q6UWI4 295 aa4.14□□□□□ -1.75
CALD1-216ENST00000473714 BICDL1Q6ZP65 573 aa4.14□□□□□ -1.75
CALD1-216ENST00000473714 SLC51AQ86UW1 340 aa4.14□□□□□ -1.75
CALD1-216ENST00000473714 GJD4Q96KN9 370 aaPredicted RBP4.14□□□□□ -1.75
CALD1-216ENST00000473714 ZIC5Q96T25 663 aa4.14□□□□□ -1.75
CALD1-216ENST00000473714 SSBP4Q9BWG4 385 aaPredicted RBP4.14□□□□□ -1.75
CALD1-216ENST00000473714 KRTAP4-2Q9BYR5 136 aa4.14□□□□□ -1.75
CALD1-216ENST00000473714 SRCAPQ6ZRS2 3230 aa4.14□□□□□ -1.75
CALD1-216ENST00000473714 SETD1AO15047 1707 aaKnown RBP4.14□□□□□ -1.75
CALD1-216ENST00000473714 CFAP43Q8NDM7 1665 aa4.13□□□□□ -1.75
CALD1-216ENST00000473714 EFSO43281 561 aa4.13□□□□□ -1.75
CALD1-216ENST00000473714 GPR37L1O60883 481 aa4.13□□□□□ -1.75
CALD1-216ENST00000473714 STAU1O95793 577 aaKnown RBP4.13□□□□□ -1.75
CALD1-216ENST00000473714 ADH7P40394 386 aa4.13□□□□□ -1.75
CALD1-216ENST00000473714 USP4Q13107 963 aa4.13□□□□□ -1.75
CALD1-216ENST00000473714 TNFRSF25Q93038 417 aa4.13□□□□□ -1.75
CALD1-216ENST00000473714 ZMYND15Q9H091 742 aa4.13□□□□□ -1.75
CALD1-216ENST00000473714 CCDC85AQ96PX6 553 aaPredicted RBP4.12□□□□□ -1.75
CALD1-216ENST00000473714 ARID3AQ99856 593 aa4.12□□□□□ -1.75
CALD1-216ENST00000473714 ZDHHC3Q9NYG2 299 aa4.12□□□□□ -1.75
CALD1-216ENST00000473714 EPRSP07814 1512 aaKnown RBP4.11□□□□□ -1.75
CALD1-216ENST00000473714 TOM1O60784 492 aa4.11□□□□□ -1.75
CALD1-216ENST00000473714 C20orf204Q6ZNR8 217 aa4.11□□□□□ -1.75
CALD1-216ENST00000473714 DDRGK1Q96HY6 314 aa4.11□□□□□ -1.75
CALD1-216ENST00000473714 NEUROD4Q9HD90 331 aa4.11□□□□□ -1.75
CALD1-216ENST00000473714 OAS3Q9Y6K5 1087 aaKnown RBP4.11□□□□□ -1.75
CALD1-216ENST00000473714 CUL7Q14999 1698 aa4.1□□□□□ -1.75
CALD1-216ENST00000473714 INHAP05111 366 aa4.1□□□□□ -1.75
CALD1-216ENST00000473714 IREB2P48200 963 aaKnown RBP4.1□□□□□ -1.75
CALD1-216ENST00000473714 SMTNP53814 917 aa4.1□□□□□ -1.75
CALD1-216ENST00000473714 GP2P55259 537 aaKnown RBP4.1□□□□□ -1.75
CALD1-216ENST00000473714 TMEM259Q4ZIN3 620 aa4.1□□□□□ -1.75
CALD1-216ENST00000473714 WFDC12Q8WWY7 111 aa4.1□□□□□ -1.75
CALD1-216ENST00000473714 SIRT1Q96EB6 747 aa4.1□□□□□ -1.75
CALD1-216ENST00000473714 CEP126Q9P2H0 1117 aa4.1□□□□□ -1.75
CALD1-216ENST00000473714 ABCC2Q92887 1545 aa4.1□□□□□ -1.75
CALD1-216ENST00000473714 PREX1Q8TCU6 1659 aa4.1□□□□□ -1.75
CALD1-216ENST00000473714 CD97P48960 835 aa4.09□□□□□ -1.75
CALD1-216ENST00000473714 GDF10P55107 478 aa4.09□□□□□ -1.75
CALD1-216ENST00000473714 PIP4K2BP78356 416 aa4.09□□□□□ -1.75
CALD1-216ENST00000473714 PRR23CQ6ZRP0 262 aa4.09□□□□□ -1.75
CALD1-216ENST00000473714 SLC30A3Q99726 388 aa4.09□□□□□ -1.75
CALD1-216ENST00000473714 CABP1Q9NZU7 370 aa4.09□□□□□ -1.75
CALD1-216ENST00000473714 ARID4BQ4LE39 1312 aaPredicted RBP4.09□□□□□ -1.75
CALD1-216ENST00000473714 FGD5Q6ZNL6 1462 aa4.09□□□□□ -1.75
CALD1-216ENST00000473714 MAGI3Q5TCQ9 1506 aa4.09□□□□□ -1.75
CALD1-216ENST00000473714 CDK2AP1O14519 115 aa4.08□□□□□ -1.76
CALD1-216ENST00000473714 FSTP19883 344 aa4.08□□□□□ -1.76
CALD1-216ENST00000473714 ADAMTS12P58397 1594 aa4.08□□□□□ -1.76
CALD1-216ENST00000473714 SPEM2Q0P670 501 aa4.08□□□□□ -1.76
CALD1-216ENST00000473714 SFSWAPQ12872 951 aaKnown RBP4.08□□□□□ -1.76
CALD1-216ENST00000473714 FLIIQ13045 1269 aa4.08□□□□□ -1.76
CALD1-216ENST00000473714 LRRC69Q6ZNQ3 347 aa4.08□□□□□ -1.76
CALD1-216ENST00000473714 DMRTC2Q8IXT2 367 aaPredicted RBP4.08□□□□□ -1.76
CALD1-216ENST00000473714 FMR1NBQ8N0W7 255 aaPredicted RBP4.08□□□□□ -1.76
CALD1-216ENST00000473714 JPH1Q9HDC5 661 aaPredicted RBP4.08□□□□□ -1.76
CALD1-216ENST00000473714 DOLKQ9UPQ8 538 aa4.08□□□□□ -1.76
CALD1-216ENST00000473714 ABCA5Q8WWZ7 1642 aa4.07□□□□□ -1.76
CALD1-216ENST00000473714 ARAP3Q8WWN8 1544 aa4.07□□□□□ -1.76
CALD1-216ENST00000473714 ZNF335Q9H4Z2 1342 aaPredicted RBP4.07□□□□□ -1.76
CALD1-216ENST00000473714 PTCD1O75127 700 aaKnown RBP4.07□□□□□ -1.76
CALD1-216ENST00000473714 JAG1P78504 1218 aa4.07□□□□□ -1.76
CALD1-216ENST00000473714 TSGA10IPQ3SY00 556 aa4.07□□□□□ -1.76
CALD1-216ENST00000473714 NUDT8Q8WV74 236 aa4.07□□□□□ -1.76
CALD1-216ENST00000473714 PCMTD1Q96MG8 357 aaPredicted RBP4.07□□□□□ -1.76
CALD1-216ENST00000473714 SERTAD1Q9UHV2 236 aa4.07□□□□□ -1.76
CALD1-216ENST00000473714 UHRF1BP1Q6BDS2 1440 aa4.06□□□□□ -1.76
CALD1-216ENST00000473714 A6NJY4 79 aa4.06□□□□□ -1.76
CALD1-216ENST00000473714 NOS3P29474 1203 aa4.06□□□□□ -1.76
CALD1-216ENST00000473714 SCNN1DP51172 638 aa4.06□□□□□ -1.76
CALD1-216ENST00000473714 TBC1D8BQ0IIM8 1120 aa4.06□□□□□ -1.76
CALD1-216ENST00000473714 OXLD1Q5BKU9 147 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms