RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, humanhuman

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBX-223ENST00000473542 RHPN1Q8TCX5 695 aa8.48□□□□□ -1.05
BBX-223ENST00000473542 DYRK3O43781 588 aa8.47□□□□□ -1.05
BBX-223ENST00000473542 ADH7P40394 386 aa8.47□□□□□ -1.05
BBX-223ENST00000473542 SERTM1A2A2V5 107 aa8.46□□□□□ -1.06
BBX-223ENST00000473542 SPDYE3A6NKU9 549 aa8.46□□□□□ -1.06
BBX-223ENST00000473542 ZBTB7BO15156 539 aaPredicted RBP8.46□□□□□ -1.06
BBX-223ENST00000473542 APBA3O96018 575 aa8.46□□□□□ -1.06
BBX-223ENST00000473542 ZNF280CQ8ND82 737 aa8.46□□□□□ -1.06
BBX-223ENST00000473542 TSPAN10Q9H1Z9 355 aaPredicted RBP8.46□□□□□ -1.06
BBX-223ENST00000473542 NEUROD4Q9HD90 331 aa8.46□□□□□ -1.06
BBX-223ENST00000473542 PODXL2Q9NZ53 605 aa8.46□□□□□ -1.06
BBX-223ENST00000473542 HCN4Q9Y3Q4 1203 aa8.46□□□□□ -1.06
BBX-223ENST00000473542 FAM196BA6NMK8 535 aa8.45□□□□□ -1.06
BBX-223ENST00000473542 C20orf204Q6ZNR8 217 aa8.45□□□□□ -1.06
BBX-223ENST00000473542 TPCN2Q8NHX9 752 aa8.45□□□□□ -1.06
BBX-223ENST00000473542 PRDM6Q9NQX0 595 aa8.45□□□□□ -1.06
BBX-223ENST00000473542 SCO2A0A1W2PP80 73 aa8.44□□□□□ -1.06
BBX-223ENST00000473542 BRD1O95696 1058 aa8.44□□□□□ -1.06
BBX-223ENST00000473542 CLDN10P78369 228 aa8.44□□□□□ -1.06
BBX-223ENST00000473542 CEP63Q96MT8 703 aa8.44□□□□□ -1.06
BBX-223ENST00000473542 BRD7Q9NPI1 651 aa8.44□□□□□ -1.06
BBX-223ENST00000473542 SFI1A8K8P3 1242 aa8.43□□□□□ -1.06
BBX-223ENST00000473542 TYRO3Q06418 890 aa8.43□□□□□ -1.06
BBX-223ENST00000473542 TRIM28Q13263 835 aaKnown RBP8.43□□□□□ -1.06
BBX-223ENST00000473542 PHACTR1Q9C0D0 580 aa8.43□□□□□ -1.06
BBX-223ENST00000473542 MKRN1Q9UHC7 482 aaKnown RBP8.43□□□□□ -1.06
BBX-223ENST00000473542 GPC6Q9Y625 555 aaPredicted RBP8.43□□□□□ -1.06
BBX-223ENST00000473542 TMEM88BA6NKF7 163 aa8.42□□□□□ -1.06
BBX-223ENST00000473542 PRSS36Q5K4E3 855 aa8.42□□□□□ -1.06
BBX-223ENST00000473542 TRIM50Q86XT4 487 aa8.42□□□□□ -1.06
BBX-223ENST00000473542 SELPP16109 830 aa8.41□□□□□ -1.06
BBX-223ENST00000473542 PSMA6P60900 246 aaKnown RBP8.41□□□□□ -1.06
BBX-223ENST00000473542 KCNA1Q09470 495 aa8.41□□□□□ -1.06
BBX-223ENST00000473542 CCDC102BQ68D86 513 aa8.41□□□□□ -1.06
BBX-223ENST00000473542 POTEAQ6S8J7 498 aa8.41□□□□□ -1.06
BBX-223ENST00000473542 BHMTQ93088 406 aa8.41□□□□□ -1.06
BBX-223ENST00000473542 SUSD3Q96L08 255 aa8.41□□□□□ -1.06
BBX-223ENST00000473542 KCNH4Q9UQ05 1017 aa8.41□□□□□ -1.06
BBX-223ENST00000473542 USP17L15C9J2P7 530 aa8.4□□□□□ -1.06
BBX-223ENST00000473542 USP17L10C9JJH3 530 aa8.4□□□□□ -1.06
BBX-223ENST00000473542 USP17L13C9JLJ4 530 aa8.4□□□□□ -1.06
BBX-223ENST00000473542 USP17L12C9JPN9 530 aa8.4□□□□□ -1.06
BBX-223ENST00000473542 USP17L11C9JVI0 530 aa8.4□□□□□ -1.06
BBX-223ENST00000473542 USP17L21D6R901 530 aa8.4□□□□□ -1.06
BBX-223ENST00000473542 USP17L18D6R9N7 530 aa8.4□□□□□ -1.06
BBX-223ENST00000473542 USP17L22D6RA61 530 aa8.4□□□□□ -1.06
BBX-223ENST00000473542 USP17L17D6RBQ6 530 aa8.4□□□□□ -1.06
BBX-223ENST00000473542 USP17L19D6RCP7 530 aa8.4□□□□□ -1.06
BBX-223ENST00000473542 USP17L20D6RJB6 530 aa8.4□□□□□ -1.06
BBX-223ENST00000473542 ATP1A2P50993 1020 aa8.4□□□□□ -1.06
BBX-223ENST00000473542 KCNQ4P56696 695 aa8.4□□□□□ -1.06
BBX-223ENST00000473542 TBC1D8BQ0IIM8 1120 aa8.4□□□□□ -1.06
BBX-223ENST00000473542 USP17L24Q0WX57 530 aa8.4□□□□□ -1.06
BBX-223ENST00000473542 PTK7Q13308 1070 aa8.4□□□□□ -1.06
BBX-223ENST00000473542 CDCA8Q53HL2 280 aa8.4□□□□□ -1.06
BBX-223ENST00000473542 TRAPPC3LQ5T215 181 aa8.4□□□□□ -1.06
BBX-223ENST00000473542 LARP1Q6PKG0 1096 aaKnown RBP8.4□□□□□ -1.06
BBX-223ENST00000473542 RASA1P20936 1047 aa8.39□□□□□ -1.07
BBX-223ENST00000473542 HIRAP54198 1017 aaPredicted RBP8.39□□□□□ -1.07
BBX-223ENST00000473542 C1orf53Q5VUE5 145 aa8.39□□□□□ -1.07
BBX-223ENST00000473542 B4GALNT3Q6L9W6 998 aa8.39□□□□□ -1.07
BBX-223ENST00000473542 SHISA2Q6UWI4 295 aa8.39□□□□□ -1.07
BBX-223ENST00000473542 TSEN2Q8NCE0 465 aaKnown RBP8.39□□□□□ -1.07
BBX-223ENST00000473542 NACC1Q96RE7 527 aa8.39□□□□□ -1.07
BBX-223ENST00000473542 ZMIZ1Q9ULJ6 1067 aa8.39□□□□□ -1.07
BBX-223ENST00000473542 NOVA2Q9UNW9 492 aaKnown RBP8.39□□□□□ -1.07
BBX-223ENST00000473542 A0A0A0MRY4 1105 aa8.38□□□□□ -1.07
BBX-223ENST00000473542 C21orf2O43822 256 aa8.38□□□□□ -1.07
BBX-223ENST00000473542 ADGRE1Q14246 886 aa8.38□□□□□ -1.07
BBX-223ENST00000473542 MBTPS1Q14703 1052 aa8.38□□□□□ -1.07
BBX-223ENST00000473542 ARTNQ5T4W7 220 aa8.38□□□□□ -1.07
BBX-223ENST00000473542 AEBP1Q8IUX7 1158 aa8.38□□□□□ -1.07
BBX-223ENST00000473542 LARGE2Q8N3Y3 721 aa8.38□□□□□ -1.07
BBX-223ENST00000473542 NUDT8Q8WV74 236 aa8.38□□□□□ -1.07
BBX-223ENST00000473542 IGFLR1Q9H665 355 aa8.38□□□□□ -1.07
BBX-223ENST00000473542 LILRB5O75023 590 aa8.37□□□□□ -1.07
BBX-223ENST00000473542 NEUROD1Q13562 356 aa8.37□□□□□ -1.07
BBX-223ENST00000473542 CRTC2Q53ET0 693 aaPredicted RBP8.37□□□□□ -1.07
BBX-223ENST00000473542 OGFOD1Q8N543 542 aa8.37□□□□□ -1.07
BBX-223ENST00000473542 UBE2OQ9C0C9 1292 aaKnown RBP8.37□□□□□ -1.07
BBX-223ENST00000473542 ZFP64Q9NPA5 681 aa8.37□□□□□ -1.07
BBX-223ENST00000473542 SLC6A14Q9UN76 642 aa8.37□□□□□ -1.07
BBX-223ENST00000473542 DKK1O94907 266 aa8.36□□□□□ -1.07
BBX-223ENST00000473542 TMEM164Q5U3C3 297 aa8.36□□□□□ -1.07
BBX-223ENST00000473542 ANKMY2Q8IV38 441 aa8.36□□□□□ -1.07
BBX-223ENST00000473542 ALDH16A1Q8IZ83 802 aa8.36□□□□□ -1.07
BBX-223ENST00000473542 SIX5Q8N196 739 aa8.36□□□□□ -1.07
BBX-223ENST00000473542 FAM200AQ8TCP9 573 aa8.36□□□□□ -1.07
BBX-223ENST00000473542 JPH1Q9HDC5 661 aaPredicted RBP8.36□□□□□ -1.07
BBX-223ENST00000473542 ANKIB1Q9P2G1 1089 aa8.36□□□□□ -1.07
BBX-223ENST00000473542 NAGPAQ9UK23 515 aa8.36□□□□□ -1.07
BBX-223ENST00000473542 PPP1R12BO60237 982 aaPredicted RBP8.35□□□□□ -1.07
BBX-223ENST00000473542 SWI5Q1ZZU3 235 aa8.35□□□□□ -1.07
BBX-223ENST00000473542 BTLAQ7Z6A9 289 aa8.35□□□□□ -1.07
BBX-223ENST00000473542 STK32AQ8WU08 396 aa8.35□□□□□ -1.07
BBX-223ENST00000473542 ZNF594Q96JF6 807 aaPredicted RBP8.35□□□□□ -1.07
BBX-223ENST00000473542 C9orf172C9J069 976 aa8.34□□□□□ -1.07
BBX-223ENST00000473542 ELNP15502 786 aa8.34□□□□□ -1.07
BBX-223ENST00000473542 CHMP3Q9Y3E7 222 aa8.34□□□□□ -1.07
BBX-223ENST00000473542 AFF1P51825 1210 aaKnown RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms