RNA–Protein interactions for RNA: ENST00000473494.6

SEC22A-204, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 1,011 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-204ENST00000473494 TRIP4Q15650 581 aaPredicted RBP10.42□□□□□ -0.74
SEC22A-204ENST00000473494 RUBCNLQ9H714 662 aa10.42□□□□□ -0.74
SEC22A-204ENST00000473494 MAN1A2O60476 641 aa10.41□□□□□ -0.74
SEC22A-204ENST00000473494 GRNP28799 593 aaKnown RBP10.41□□□□□ -0.74
SEC22A-204ENST00000473494 PLCB3Q01970 1234 aa10.41□□□□□ -0.74
SEC22A-204ENST00000473494 ENOX2Q16206 610 aaKnown RBP10.41□□□□□ -0.74
SEC22A-204ENST00000473494 NIF3L1Q9GZT8 377 aa10.41□□□□□ -0.74
SEC22A-204ENST00000473494 GGNBP2Q9H3C7 697 aa10.41□□□□□ -0.74
SEC22A-204ENST00000473494 NEUROD4Q9HD90 331 aa10.41□□□□□ -0.74
SEC22A-204ENST00000473494 PRPF40AO75400 957 aaKnown RBP10.4□□□□□ -0.74
SEC22A-204ENST00000473494 EPB42P16452 691 aa10.4□□□□□ -0.74
SEC22A-204ENST00000473494 MAPK8P45983 427 aa10.4□□□□□ -0.74
SEC22A-204ENST00000473494 PGBD3Q8N328 593 aa10.4□□□□□ -0.74
SEC22A-204ENST00000473494 IGSF5Q9NSI5 407 aa10.4□□□□□ -0.74
SEC22A-204ENST00000473494 RTCBQ9Y3I0 505 aaKnown RBP10.4□□□□□ -0.74
SEC22A-204ENST00000473494 KCNMB2Q9Y691 235 aa10.4□□□□□ -0.74
SEC22A-204ENST00000473494 LDHBP07195 334 aaKnown RBP10.39□□□□□ -0.75
SEC22A-204ENST00000473494 PDE12Q6L8Q7 609 aaKnown RBP10.39□□□□□ -0.75
SEC22A-204ENST00000473494 GJA3Q9Y6H8 435 aa10.39□□□□□ -0.75
SEC22A-204ENST00000473494 PNMA6FA0A0J9YX94 578 aa10.38□□□□□ -0.75
SEC22A-204ENST00000473494 SLC35F4A4IF30 521 aa10.38□□□□□ -0.75
SEC22A-204ENST00000473494 THBS1P07996 1170 aa10.38□□□□□ -0.75
SEC22A-204ENST00000473494 FAM157BP0CG42 384 aa10.38□□□□□ -0.75
SEC22A-204ENST00000473494 ATP2B2Q01814 1243 aa10.38□□□□□ -0.75
SEC22A-204ENST00000473494 EFHC2Q5JST6 749 aa10.38□□□□□ -0.75
SEC22A-204ENST00000473494 XKR5Q6UX68 686 aa10.38□□□□□ -0.75
SEC22A-204ENST00000473494 GAS2L1Q99501 681 aaPredicted RBP10.38□□□□□ -0.75
SEC22A-204ENST00000473494 C11orf16Q9NQ32 467 aa10.38□□□□□ -0.75
SEC22A-204ENST00000473494 DACH1Q9UI36 760 aa10.38□□□□□ -0.75
SEC22A-204ENST00000473494 A6NHS1 94 aa10.37□□□□□ -0.75
SEC22A-204ENST00000473494 C8orf34Q49A92 452 aa10.37□□□□□ -0.75
SEC22A-204ENST00000473494 FBF1Q8TES7 1133 aa10.37□□□□□ -0.75
SEC22A-204ENST00000473494 KIFC2Q96AC6 838 aa10.37□□□□□ -0.75
SEC22A-204ENST00000473494 CEP63Q96MT8 703 aa10.37□□□□□ -0.75
SEC22A-204ENST00000473494 CSRNP1Q96S65 589 aa10.37□□□□□ -0.75
SEC22A-204ENST00000473494 DNAJC25Q9H1X3 360 aa10.37□□□□□ -0.75
SEC22A-204ENST00000473494 FNDC3AQ9Y2H6 1198 aaKnown RBP10.37□□□□□ -0.75
SEC22A-204ENST00000473494 USP20Q9Y2K6 914 aa10.37□□□□□ -0.75
SEC22A-204ENST00000473494 SOBPA7XYQ1 873 aa10.36□□□□□ -0.75
SEC22A-204ENST00000473494 EFSO43281 561 aa10.36□□□□□ -0.75
SEC22A-204ENST00000473494 RECKO95980 971 aa10.36□□□□□ -0.75
SEC22A-204ENST00000473494 EGFRP00533 1210 aa10.36□□□□□ -0.75
SEC22A-204ENST00000473494 KCNQ4P56696 695 aa10.36□□□□□ -0.75
SEC22A-204ENST00000473494 PTSQ03393 145 aa10.36□□□□□ -0.75
SEC22A-204ENST00000473494 ORC1Q13415 861 aa10.36□□□□□ -0.75
SEC22A-204ENST00000473494 UBAP2LQ14157 1087 aaKnown RBP10.36□□□□□ -0.75
SEC22A-204ENST00000473494 MRPL58Q14197 206 aaKnown RBP10.36□□□□□ -0.75
SEC22A-204ENST00000473494 FIGNL1Q6PIW4 674 aa10.36□□□□□ -0.75
SEC22A-204ENST00000473494 TTC16Q8NEE8 873 aa10.36□□□□□ -0.75
SEC22A-204ENST00000473494 SNX29Q8TEQ0 813 aa10.36□□□□□ -0.75
SEC22A-204ENST00000473494 BCL11AQ9H165 835 aa10.36□□□□□ -0.75
SEC22A-204ENST00000473494 SENP2Q9HC62 589 aa10.36□□□□□ -0.75
SEC22A-204ENST00000473494 BRD7Q9NPI1 651 aa10.36□□□□□ -0.75
SEC22A-204ENST00000473494 NEFLP07196 543 aa10.35□□□□□ -0.75
SEC22A-204ENST00000473494 ALG1LQ6GMV1 187 aa10.35□□□□□ -0.75
SEC22A-204ENST00000473494 TRIM47Q96LD4 638 aa10.35□□□□□ -0.75
SEC22A-204ENST00000473494 CFHR5Q9BXR6 569 aa10.35□□□□□ -0.75
SEC22A-204ENST00000473494 UBAP1LF5GYI3 381 aa10.34□□□□□ -0.75
SEC22A-204ENST00000473494 EIF1AYO14602 144 aaKnown RBP10.34□□□□□ -0.75
SEC22A-204ENST00000473494 TNFRSF21O75509 655 aa10.34□□□□□ -0.75
SEC22A-204ENST00000473494 CMTR1Q8N1G2 835 aaKnown RBP10.34□□□□□ -0.75
SEC22A-204ENST00000473494 ZNF438Q7Z4V0 828 aa10.33□□□□□ -0.76
SEC22A-204ENST00000473494 SETDB2Q96T68 719 aa10.33□□□□□ -0.76
SEC22A-204ENST00000473494 DUSP9Q99956 384 aaKnown RBP10.33□□□□□ -0.76
SEC22A-204ENST00000473494 ZCCHC2Q9C0B9 1178 aaKnown RBP10.33□□□□□ -0.76
SEC22A-204ENST00000473494 WWC3Q9ULE0 1092 aa10.33□□□□□ -0.76
SEC22A-204ENST00000473494 CPNE3O75131 537 aaKnown RBP10.32□□□□□ -0.76
SEC22A-204ENST00000473494 TMC4Q7Z404 712 aa10.32□□□□□ -0.76
SEC22A-204ENST00000473494 NUCKS1Q9H1E3 243 aaKnown RBP10.32□□□□□ -0.76
SEC22A-204ENST00000473494 PARP2Q9UGN5 583 aa10.32□□□□□ -0.76
SEC22A-204ENST00000473494 FOXD3Q9UJU5 478 aaPredicted RBP10.32□□□□□ -0.76
SEC22A-204ENST00000473494 ATXN7O15265 892 aaPredicted RBP10.31□□□□□ -0.76
SEC22A-204ENST00000473494 XYLBO75191 536 aa10.31□□□□□ -0.76
SEC22A-204ENST00000473494 ITGAEP38570 1179 aa10.31□□□□□ -0.76
SEC22A-204ENST00000473494 LAMC2Q13753 1193 aa10.31□□□□□ -0.76
SEC22A-204ENST00000473494 TRIM22Q8IYM9 498 aa10.31□□□□□ -0.76
SEC22A-204ENST00000473494 CCDC155Q8N6L0 562 aa10.31□□□□□ -0.76
SEC22A-204ENST00000473494 IRX2Q9BZI1 471 aaPredicted RBP10.31□□□□□ -0.76
SEC22A-204ENST00000473494 ELP3Q9H9T3 547 aa10.31□□□□□ -0.76
SEC22A-204ENST00000473494 NDFIP2Q9NV92 336 aa10.31□□□□□ -0.76
SEC22A-204ENST00000473494 PCDHGC4Q9Y5F7 938 aa10.31□□□□□ -0.76
SEC22A-204ENST00000473494 H7C1W4 665 aa10.3□□□□□ -0.76
SEC22A-204ENST00000473494 DAB2P98082 770 aa10.3□□□□□ -0.76
SEC22A-204ENST00000473494 RIPOR1Q6ZS17 1223 aa10.3□□□□□ -0.76
SEC22A-204ENST00000473494 ZNF837Q96EG3 531 aaPredicted RBP10.3□□□□□ -0.76
SEC22A-204ENST00000473494 GMCL1Q96IK5 515 aa10.3□□□□□ -0.76
SEC22A-204ENST00000473494 TMEM63CQ9P1W3 806 aa10.3□□□□□ -0.76
SEC22A-204ENST00000473494 KCNH4Q9UQ05 1017 aa10.3□□□□□ -0.76
SEC22A-204ENST00000473494 TCF3P15923 654 aa10.29□□□□□ -0.76
SEC22A-204ENST00000473494 GNA15P30679 374 aa10.29□□□□□ -0.76
SEC22A-204ENST00000473494 XPCQ01831 940 aaPredicted RBP10.29□□□□□ -0.76
SEC22A-204ENST00000473494 CHRDQ9H2X0 955 aa10.29□□□□□ -0.76
SEC22A-204ENST00000473494 CUEDC1Q9NWM3 386 aaPredicted RBP10.29□□□□□ -0.76
SEC22A-204ENST00000473494 DCDC2BA2VCK2 349 aa10.28□□□□□ -0.76
SEC22A-204ENST00000473494 PHACTR2O75167 634 aa10.28□□□□□ -0.76
SEC22A-204ENST00000473494 TNP2Q05952 138 aa10.28□□□□□ -0.76
SEC22A-204ENST00000473494 NLRP13Q86W25 1043 aa10.28□□□□□ -0.76
SEC22A-204ENST00000473494 RNF19AQ9NV58 838 aa10.28□□□□□ -0.76
SEC22A-204ENST00000473494 ABI2Q9NYB9 513 aaPredicted RBP10.28□□□□□ -0.76
SEC22A-204ENST00000473494 GMPR2Q9P2T1 348 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms