RNA–Protein interactions for RNA: ENST00000473214.1

RTF1-203, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene RTF1, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-203ENST00000473214 PLEKHG6Q3KR16 790 aa7.84□□□□□ -1.15
RTF1-203ENST00000473214 TSHZ1Q6ZSZ6 1077 aa7.84□□□□□ -1.15
RTF1-203ENST00000473214 PRICKLE2Q7Z3G6 844 aa7.84□□□□□ -1.15
RTF1-203ENST00000473214 ZNF837Q96EG3 531 aaPredicted RBP7.84□□□□□ -1.15
RTF1-203ENST00000473214 TRIM34Q9BYJ4 488 aa7.84□□□□□ -1.15
RTF1-203ENST00000473214 CYLDQ9NQC7 956 aa7.84□□□□□ -1.15
RTF1-203ENST00000473214 NLRP2Q9NX02 1062 aa7.84□□□□□ -1.15
RTF1-203ENST00000473214 IGF1RP08069 1367 aa7.84□□□□□ -1.16
RTF1-203ENST00000473214 SNAPC4Q5SXM2 1469 aa7.83□□□□□ -1.16
RTF1-203ENST00000473214 RAD54L2Q9Y4B4 1467 aa7.83□□□□□ -1.16
RTF1-203ENST00000473214 BCRP11274 1271 aa7.83□□□□□ -1.16
RTF1-203ENST00000473214 GPC1P35052 558 aa7.83□□□□□ -1.16
RTF1-203ENST00000473214 KRBA2Q6ZNG9 492 aa7.83□□□□□ -1.16
RTF1-203ENST00000473214 TBC1D9Q6ZT07 1266 aa7.83□□□□□ -1.16
RTF1-203ENST00000473214 NT5DC4Q86YG4 428 aa7.83□□□□□ -1.16
RTF1-203ENST00000473214 SLC43A3Q8NBI5 491 aa7.83□□□□□ -1.16
RTF1-203ENST00000473214 TRIM52Q96A61 297 aa7.83□□□□□ -1.16
RTF1-203ENST00000473214 ARMC5Q96C12 935 aa7.83□□□□□ -1.16
RTF1-203ENST00000473214 CCSER2Q9H7U1 834 aa7.83□□□□□ -1.16
RTF1-203ENST00000473214 GAPVD1Q14C86 1478 aa7.82□□□□□ -1.16
RTF1-203ENST00000473214 ATP5J2-PTCD1G3V325 749 aa7.82□□□□□ -1.16
RTF1-203ENST00000473214 GPR25O00155 361 aa7.82□□□□□ -1.16
RTF1-203ENST00000473214 S100BP04271 92 aaPredicted RBP7.82□□□□□ -1.16
RTF1-203ENST00000473214 RHOQP17081 205 aa7.82□□□□□ -1.16
RTF1-203ENST00000473214 DBN1Q16643 649 aa7.82□□□□□ -1.16
RTF1-203ENST00000473214 PODNQ7Z5L7 613 aa7.82□□□□□ -1.16
RTF1-203ENST00000473214 JAZF1Q86VZ6 243 aa7.82□□□□□ -1.16
RTF1-203ENST00000473214 GALNT6Q8NCL4 622 aa7.82□□□□□ -1.16
RTF1-203ENST00000473214 NEDD1Q8NHV4 660 aa7.82□□□□□ -1.16
RTF1-203ENST00000473214 GJD4Q96KN9 370 aaPredicted RBP7.82□□□□□ -1.16
RTF1-203ENST00000473214 MTA3Q9BTC8 594 aa7.82□□□□□ -1.16
RTF1-203ENST00000473214 MAF1Q9H063 256 aa7.82□□□□□ -1.16
RTF1-203ENST00000473214 IRF2BPLQ9H1B7 796 aa7.82□□□□□ -1.16
RTF1-203ENST00000473214 DMGDHQ9UI17 866 aaKnown RBP7.82□□□□□ -1.16
RTF1-203ENST00000473214 KIF13AQ9H1H9 1805 aa7.82□□□□□ -1.16
RTF1-203ENST00000473214 DNMBPQ6XZF7 1577 aa7.81□□□□□ -1.16
RTF1-203ENST00000473214 ATP9BO43861 1147 aa7.81□□□□□ -1.16
RTF1-203ENST00000473214 NEFMP07197 916 aa7.81□□□□□ -1.16
RTF1-203ENST00000473214 HSD3B2P26439 372 aa7.81□□□□□ -1.16
RTF1-203ENST00000473214 MAPK1P28482 360 aa7.81□□□□□ -1.16
RTF1-203ENST00000473214 RHBDL3P58872 404 aa7.81□□□□□ -1.16
RTF1-203ENST00000473214 BIRC2Q13490 618 aa7.81□□□□□ -1.16
RTF1-203ENST00000473214 C4orf46Q504U0 113 aa7.81□□□□□ -1.16
RTF1-203ENST00000473214 WDR78Q5VTH9 848 aa7.81□□□□□ -1.16
RTF1-203ENST00000473214 FILIP1Q7Z7B0 1213 aa7.81□□□□□ -1.16
RTF1-203ENST00000473214 KRTAP4-8Q9BYQ9 185 aa7.81□□□□□ -1.16
RTF1-203ENST00000473214 PCDH12Q9NPG4 1184 aa7.81□□□□□ -1.16
RTF1-203ENST00000473214 TOP2AP11388 1531 aaKnown RBP7.81□□□□□ -1.16
RTF1-203ENST00000473214 TDRD9Q8NDG6 1382 aaKnown RBP7.81□□□□□ -1.16
RTF1-203ENST00000473214 POLA1P09884 1462 aaPredicted RBP7.81□□□□□ -1.16
RTF1-203ENST00000473214 WDHD1O75717 1129 aaPredicted RBP7.8□□□□□ -1.16
RTF1-203ENST00000473214 BMS1Q14692 1282 aaKnown RBP7.8□□□□□ -1.16
RTF1-203ENST00000473214 KANK4Q5T7N3 995 aaPredicted RBP7.8□□□□□ -1.16
RTF1-203ENST00000473214 ZNF746Q6NUN9 644 aaPredicted RBP7.8□□□□□ -1.16
RTF1-203ENST00000473214 FOXR1Q6PIV2 292 aa7.8□□□□□ -1.16
RTF1-203ENST00000473214 CLEC4GQ6UXB4 293 aa7.8□□□□□ -1.16
RTF1-203ENST00000473214 ACDQ96AP0 544 aa7.8□□□□□ -1.16
RTF1-203ENST00000473214 SLAIN2Q9P270 581 aa7.8□□□□□ -1.16
RTF1-203ENST00000473214 PRR12Q9ULL5 1215 aa7.8□□□□□ -1.16
RTF1-203ENST00000473214 DYRK1BQ9Y463 629 aa7.8□□□□□ -1.16
RTF1-203ENST00000473214 A0A1W2PRU2 124 aa7.79□□□□□ -1.16
RTF1-203ENST00000473214 K7ELQ4 463 aaPredicted RBP7.79□□□□□ -1.16
RTF1-203ENST00000473214 LZTS3O60299 673 aaPredicted RBP7.79□□□□□ -1.16
RTF1-203ENST00000473214 GIGYF1O75420 1035 aaPredicted RBP7.79□□□□□ -1.16
RTF1-203ENST00000473214 KIF4AO95239 1232 aa7.79□□□□□ -1.16
RTF1-203ENST00000473214 DNAJA1P31689 397 aaKnown RBP7.79□□□□□ -1.16
RTF1-203ENST00000473214 TBX4P57082 545 aa7.79□□□□□ -1.16
RTF1-203ENST00000473214 SEMA3FQ13275 785 aa7.79□□□□□ -1.16
RTF1-203ENST00000473214 GNL2Q13823 731 aaKnown RBP7.79□□□□□ -1.16
RTF1-203ENST00000473214 MRPL58Q14197 206 aaKnown RBP7.79□□□□□ -1.16
RTF1-203ENST00000473214 EAPPQ56P03 285 aaPredicted RBP7.79□□□□□ -1.16
RTF1-203ENST00000473214 PNISRQ8TF01 805 aaKnown RBP7.79□□□□□ -1.16
RTF1-203ENST00000473214 OSBPL2Q9H1P3 480 aa7.79□□□□□ -1.16
RTF1-203ENST00000473214 IFT57Q9NWB7 429 aa7.79□□□□□ -1.16
RTF1-203ENST00000473214 RPS6KL1Q9Y6S9 549 aa7.79□□□□□ -1.16
RTF1-203ENST00000473214 PTMAP06454 111 aaKnown RBP7.78□□□□□ -1.16
RTF1-203ENST00000473214 SOX11P35716 441 aa7.78□□□□□ -1.16
RTF1-203ENST00000473214 ERVK-9P63128 1117 aa7.78□□□□□ -1.16
RTF1-203ENST00000473214 RIPOR1Q6ZS17 1223 aa7.78□□□□□ -1.16
RTF1-203ENST00000473214 C11orf96Q7Z7L8 435 aa7.78□□□□□ -1.16
RTF1-203ENST00000473214 FMNL3Q8IVF7 1028 aa7.78□□□□□ -1.16
RTF1-203ENST00000473214 RPS6KC1Q96S38 1066 aa7.78□□□□□ -1.16
RTF1-203ENST00000473214 TGIF2Q9GZN2 237 aa7.78□□□□□ -1.16
RTF1-203ENST00000473214 LRRC4BQ9NT99 713 aa7.78□□□□□ -1.16
RTF1-203ENST00000473214 GNL3LQ9NVN8 582 aaKnown RBP7.78□□□□□ -1.16
RTF1-203ENST00000473214 WWC3Q9ULE0 1092 aa7.78□□□□□ -1.16
RTF1-203ENST00000473214 MRPL42Q9Y6G3 142 aaKnown RBP7.78□□□□□ -1.16
RTF1-203ENST00000473214 COMMD10Q9Y6G5 202 aa7.78□□□□□ -1.16
RTF1-203ENST00000473214 SYNJ1O43426 1573 aa7.78□□□□□ -1.16
RTF1-203ENST00000473214 ZBBXA8MT70 800 aa7.77□□□□□ -1.17
RTF1-203ENST00000473214 H7C1W4 665 aa7.77□□□□□ -1.17
RTF1-203ENST00000473214 CCER2I3L3R5 266 aa7.77□□□□□ -1.17
RTF1-203ENST00000473214 MEN1O00255 615 aa7.77□□□□□ -1.17
RTF1-203ENST00000473214 GPR37L1O60883 481 aa7.77□□□□□ -1.17
RTF1-203ENST00000473214 ATP2B4P23634 1241 aa7.77□□□□□ -1.17
RTF1-203ENST00000473214 SOGA3Q5TF21 947 aa7.77□□□□□ -1.17
RTF1-203ENST00000473214 METTL16Q86W50 562 aaKnown RBP7.77□□□□□ -1.17
RTF1-203ENST00000473214 ZSCAN29Q8IWY8 852 aaPredicted RBP7.77□□□□□ -1.17
RTF1-203ENST00000473214 TMEM87AQ8NBN3 555 aa7.77□□□□□ -1.17
RTF1-203ENST00000473214 ASB16Q96NS5 453 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms