RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 PLBD2Q8NHP8 589 aa16.88■□□□□ 0.29
TPM3-216ENST00000473036 RNF181Q9P0P0 153 aa16.88■□□□□ 0.29
TPM3-216ENST00000473036 ABCC12Q96J65 1359 aa16.88■□□□□ 0.29
TPM3-216ENST00000473036 PCNTO95613 3336 aa16.88■□□□□ 0.29
TPM3-216ENST00000473036 NTSR2O95665 410 aa16.87■□□□□ 0.29
TPM3-216ENST00000473036 TCIRG1Q13488 830 aa16.87■□□□□ 0.29
TPM3-216ENST00000473036 NBPF5PQ86XG9 351 aaPredicted RBP16.87■□□□□ 0.29
TPM3-216ENST00000473036 NUTM1Q86Y26 1132 aa16.87■□□□□ 0.29
TPM3-216ENST00000473036 SYNE4Q8N205 404 aa16.87■□□□□ 0.29
TPM3-216ENST00000473036 ISCA1Q9BUE6 129 aa16.87■□□□□ 0.29
TPM3-216ENST00000473036 ERFEQ4G0M1 354 aa16.86■□□□□ 0.29
TPM3-216ENST00000473036 NLRP10Q86W26 655 aa16.86■□□□□ 0.29
TPM3-216ENST00000473036 CNBD1Q8NA66 436 aa16.86■□□□□ 0.29
TPM3-216ENST00000473036 ATP5J2-PTCD1G3V325 749 aa16.85■□□□□ 0.29
TPM3-216ENST00000473036 C3orf67Q6ZVT6 689 aa16.85■□□□□ 0.29
TPM3-216ENST00000473036 BRIP1Q9BX63 1249 aa16.85■□□□□ 0.29
TPM3-216ENST00000473036 FLIIQ13045 1269 aa16.84■□□□□ 0.29
TPM3-216ENST00000473036 STK31Q9BXU1 1019 aa16.84■□□□□ 0.29
TPM3-216ENST00000473036 IBTKQ9P2D0 1353 aaPredicted RBP16.84■□□□□ 0.29
TPM3-216ENST00000473036 KLRG2A4D1S0 409 aaPredicted RBP16.83■□□□□ 0.28
TPM3-216ENST00000473036 PI4KAP2A4QPH2 592 aa16.83■□□□□ 0.28
TPM3-216ENST00000473036 TPTE2Q6XPS3 522 aa16.83■□□□□ 0.28
TPM3-216ENST00000473036 RIC3Q7Z5B4 369 aa16.83■□□□□ 0.28
TPM3-216ENST00000473036 C2CD5Q86YS7 1000 aa16.83■□□□□ 0.28
TPM3-216ENST00000473036 PI4KAP1Q8N8J0 262 aa16.83■□□□□ 0.28
TPM3-216ENST00000473036 RRAGCQ9HB90 399 aa16.83■□□□□ 0.28
TPM3-216ENST00000473036 MAP3K2Q9Y2U5 619 aa16.83■□□□□ 0.28
TPM3-216ENST00000473036 LAMB2P55268 1798 aa16.82■□□□□ 0.28
TPM3-216ENST00000473036 DDX60Q8IY21 1712 aaKnown RBP16.82■□□□□ 0.28
TPM3-216ENST00000473036 ZBED9Q6R2W3 1325 aa16.82■□□□□ 0.28
TPM3-216ENST00000473036 IGKV5-2P06315 115 aa16.82■□□□□ 0.28
TPM3-216ENST00000473036 VEGFAP15692 232 aaPredicted RBP16.82■□□□□ 0.28
TPM3-216ENST00000473036 LMNB1P20700 586 aa16.82■□□□□ 0.28
TPM3-216ENST00000473036 PARP10Q53GL7 1025 aa16.82■□□□□ 0.28
TPM3-216ENST00000473036 HSP90AB3PQ58FF7 597 aa16.82■□□□□ 0.28
TPM3-216ENST00000473036 KSR2Q6VAB6 950 aa16.82■□□□□ 0.28
TPM3-216ENST00000473036 MRPL50Q8N5N7 158 aaKnown RBP16.82■□□□□ 0.28
TPM3-216ENST00000473036 SSH1Q8WYL5 1049 aa16.82■□□□□ 0.28
TPM3-216ENST00000473036 MYD88Q99836 296 aa16.82■□□□□ 0.28
TPM3-216ENST00000473036 METTL22Q9BUU2 404 aaPredicted RBP16.82■□□□□ 0.28
TPM3-216ENST00000473036 CACNA1SQ13698 1873 aa16.82■□□□□ 0.28
TPM3-216ENST00000473036 GLTPD2A6NH11 291 aa16.81■□□□□ 0.28
TPM3-216ENST00000473036 ST5P78524 1137 aa16.81■□□□□ 0.28
TPM3-216ENST00000473036 TRIM28Q13263 835 aaKnown RBP16.81■□□□□ 0.28
TPM3-216ENST00000473036 CHMP4AQ9BY43 222 aa16.81■□□□□ 0.28
TPM3-216ENST00000473036 PDZRN3Q9UPQ7 1066 aa16.81■□□□□ 0.28
TPM3-216ENST00000473036 SBF1O95248 1867 aa16.81■□□□□ 0.28
TPM3-216ENST00000473036 SLX4Q8IY92 1834 aa16.81■□□□□ 0.28
TPM3-216ENST00000473036 F6X3S4 739 aa16.8■□□□□ 0.28
TPM3-216ENST00000473036 SRGNP10124 158 aa16.8■□□□□ 0.28
TPM3-216ENST00000473036 SLC10A5Q5PT55 438 aa16.8■□□□□ 0.28
TPM3-216ENST00000473036 COL13A1Q5TAT6 717 aaPredicted RBP16.8■□□□□ 0.28
TPM3-216ENST00000473036 UTP14AQ9BVJ6 771 aaKnown RBP16.8■□□□□ 0.28
TPM3-216ENST00000473036 BCL2L13Q9BXK5 485 aa16.8■□□□□ 0.28
TPM3-216ENST00000473036 NYXQ9GZU5 481 aa16.8■□□□□ 0.28
TPM3-216ENST00000473036 H0YIN7 160 aa16.79■□□□□ 0.28
TPM3-216ENST00000473036 PDE6BP35913 854 aa16.79■□□□□ 0.28
TPM3-216ENST00000473036 PPP1R42Q7Z4L9 355 aa16.79■□□□□ 0.28
TPM3-216ENST00000473036 SLC51AQ86UW1 340 aa16.79■□□□□ 0.28
TPM3-216ENST00000473036 JARID2Q92833 1246 aaPredicted RBP16.79■□□□□ 0.28
TPM3-216ENST00000473036 RIC1Q4ADV7 1423 aa16.79■□□□□ 0.28
TPM3-216ENST00000473036 COL4A1P02462 1669 aa16.78■□□□□ 0.28
TPM3-216ENST00000473036 TAF1P21675 1872 aa16.78■□□□□ 0.28
TPM3-216ENST00000473036 DDX58O95786 925 aaKnown RBP16.78■□□□□ 0.28
TPM3-216ENST00000473036 HCLS1P14317 486 aaPredicted RBP16.78■□□□□ 0.28
TPM3-216ENST00000473036 PRELPP51888 382 aa16.78■□□□□ 0.28
TPM3-216ENST00000473036 FKBP5Q13451 457 aaPredicted RBP16.78■□□□□ 0.28
TPM3-216ENST00000473036 CWF19L2Q2TBE0 894 aaKnown RBP16.78■□□□□ 0.28
TPM3-216ENST00000473036 CRY2Q49AN0 593 aa16.78■□□□□ 0.28
TPM3-216ENST00000473036 TNS4Q8IZW8 715 aa16.78■□□□□ 0.28
TPM3-216ENST00000473036 TTLL6Q8N841 843 aa16.78■□□□□ 0.28
TPM3-216ENST00000473036 FAM89AQ96GI7 184 aa16.78■□□□□ 0.28
TPM3-216ENST00000473036 TRMT112Q9UI30 125 aaKnown RBP16.78■□□□□ 0.28
TPM3-216ENST00000473036 NPHP1O15259 732 aa16.77■□□□□ 0.28
TPM3-216ENST00000473036 HTRA3P83110 453 aa16.77■□□□□ 0.28
TPM3-216ENST00000473036 RTL5Q5HYW3 569 aaPredicted RBP16.77■□□□□ 0.28
TPM3-216ENST00000473036 NEURL1BA8MQ27 555 aa16.76■□□□□ 0.27
TPM3-216ENST00000473036 GTF2E1P29083 439 aaPredicted RBP16.76■□□□□ 0.27
TPM3-216ENST00000473036 DNAAF4Q8WXU2 420 aa16.76■□□□□ 0.27
TPM3-216ENST00000473036 ZNF622Q969S3 477 aaKnown RBP eCLIP16.76■□□□□ 0.273e-8■■□□□ 14.4
TPM3-216ENST00000473036 SH3TC1Q8TE82 1336 aa16.75■□□□□ 0.27
TPM3-216ENST00000473036 RARSP54136 660 aaKnown RBP16.75■□□□□ 0.27
TPM3-216ENST00000473036 ALDH1L2Q3SY69 923 aa16.75■□□□□ 0.27
TPM3-216ENST00000473036 STYK1Q6J9G0 422 aa16.75■□□□□ 0.27
TPM3-216ENST00000473036 DPY19L2Q6NUT2 758 aa16.75■□□□□ 0.27
TPM3-216ENST00000473036 CCDC191Q8NCU4 936 aa16.75■□□□□ 0.27
TPM3-216ENST00000473036 MASTLQ96GX5 879 aa16.75■□□□□ 0.27
TPM3-216ENST00000473036 CT47B1P0C2W7 299 aaPredicted RBP16.74■□□□□ 0.27
TPM3-216ENST00000473036 BEND3Q5T5X7 828 aa16.74■□□□□ 0.27
TPM3-216ENST00000473036 OLFM4Q6UX06 510 aa16.74■□□□□ 0.27
TPM3-216ENST00000473036 C7orf43Q8WVR3 580 aa16.74■□□□□ 0.27
TPM3-216ENST00000473036 CWC25Q9NXE8 425 aaPredicted RBP16.74■□□□□ 0.27
TPM3-216ENST00000473036 RNF123Q5XPI4 1314 aa16.73■□□□□ 0.27
TPM3-216ENST00000473036 NPR1P16066 1061 aa16.73■□□□□ 0.27
TPM3-216ENST00000473036 HOXA10P31260 410 aaPredicted RBP16.73■□□□□ 0.27
TPM3-216ENST00000473036 CASP7P55210 303 aa16.73■□□□□ 0.27
TPM3-216ENST00000473036 RASSF7Q02833 373 aa16.73■□□□□ 0.27
TPM3-216ENST00000473036 ZBTB38Q8NAP3 1195 aaPredicted RBP16.73■□□□□ 0.27
TPM3-216ENST00000473036 FER1L6Q2WGJ9 1857 aa16.72■□□□□ 0.27
TPM3-216ENST00000473036 PRPF40BQ6NWY9 871 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms