RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 DPEP1P16444 411 aa26.47■■□□□ 1.83
TOP3A-204ENST00000472959 NUTM1Q86Y26 1132 aa26.47■■□□□ 1.83
TOP3A-204ENST00000472959 H0YIN7 160 aa26.46■■□□□ 1.83
TOP3A-204ENST00000472959 ERFEQ4G0M1 354 aa26.46■■□□□ 1.83
TOP3A-204ENST00000472959 SLC10A5Q5PT55 438 aa26.45■■□□□ 1.82
TOP3A-204ENST00000472959 C2CD5Q86YS7 1000 aa26.45■■□□□ 1.82
TOP3A-204ENST00000472959 CWC25Q9NXE8 425 aaPredicted RBP26.45■■□□□ 1.82
TOP3A-204ENST00000472959 SH3TC1Q8TE82 1336 aa26.44■■□□□ 1.82
TOP3A-204ENST00000472959 ARFGEF2Q9Y6D5 1785 aa26.44■■□□□ 1.82
TOP3A-204ENST00000472959 KLRG2A4D1S0 409 aaPredicted RBP26.44■■□□□ 1.82
TOP3A-204ENST00000472959 DCAF8L1A6NGE4 600 aa26.44■■□□□ 1.82
TOP3A-204ENST00000472959 RIC1Q4ADV7 1423 aa26.43■■□□□ 1.82
TOP3A-204ENST00000472959 F6X3S4 739 aa26.43■■□□□ 1.82
TOP3A-204ENST00000472959 IGKV5-2P06315 115 aa26.43■■□□□ 1.82
TOP3A-204ENST00000472959 KCNA3P22001 575 aa26.43■■□□□ 1.82
TOP3A-204ENST00000472959 CHRNA5P30532 468 aa26.43■■□□□ 1.82
TOP3A-204ENST00000472959 LINS1Q8NG48 757 aa26.43■■□□□ 1.82
TOP3A-204ENST00000472959 ANKRD36CQ5JPF3 1778 aa26.43■■□□□ 1.82
TOP3A-204ENST00000472959 ZBTB38Q8NAP3 1195 aaPredicted RBP26.42■■□□□ 1.82
TOP3A-204ENST00000472959 YTHDC1Q96MU7 727 aaKnown RBP26.42■■□□□ 1.82
TOP3A-204ENST00000472959 PIM2Q9P1W9 311 aa26.42■■□□□ 1.82
TOP3A-204ENST00000472959 ABCC12Q96J65 1359 aa26.42■■□□□ 1.82
TOP3A-204ENST00000472959 NEURL1BA8MQ27 555 aa26.41■■□□□ 1.82
TOP3A-204ENST00000472959 KIF16BQ96L93 1317 aa26.4■■□□□ 1.82
TOP3A-204ENST00000472959 HSP90B1P14625 803 aaKnown RBP26.4■■□□□ 1.82
TOP3A-204ENST00000472959 PCCAP05165 728 aaPredicted RBP26.39■■□□□ 1.82
TOP3A-204ENST00000472959 SRGNP10124 158 aa26.39■■□□□ 1.82
TOP3A-204ENST00000472959 CWF19L2Q2TBE0 894 aaKnown RBP26.39■■□□□ 1.82
TOP3A-204ENST00000472959 BEND3Q5T5X7 828 aa26.39■■□□□ 1.82
TOP3A-204ENST00000472959 FAM89AQ96GI7 184 aa26.39■■□□□ 1.82
TOP3A-204ENST00000472959 NLRP3Q96P20 1036 aa26.39■■□□□ 1.82
TOP3A-204ENST00000472959 NOB1Q9ULX3 412 aaKnown RBP26.39■■□□□ 1.82
TOP3A-204ENST00000472959 GPR162Q16538 588 aa26.38■■□□□ 1.81
TOP3A-204ENST00000472959 CRY2Q49AN0 593 aa26.38■■□□□ 1.81
TOP3A-204ENST00000472959 STYK1Q6J9G0 422 aa26.38■■□□□ 1.81
TOP3A-204ENST00000472959 SYNE4Q8N205 404 aa26.38■■□□□ 1.81
TOP3A-204ENST00000472959 ARHGAP45Q92619 1136 aa26.38■■□□□ 1.81
TOP3A-204ENST00000472959 MASTLQ96GX5 879 aa26.38■■□□□ 1.81
TOP3A-204ENST00000472959 IPO8O15397 1037 aaKnown RBP26.37■■□□□ 1.81
TOP3A-204ENST00000472959 NPR1P16066 1061 aa26.37■■□□□ 1.81
TOP3A-204ENST00000472959 GCKRQ14397 625 aa26.37■■□□□ 1.81
TOP3A-204ENST00000472959 DALRD3Q5D0E6 543 aaKnown RBP26.37■■□□□ 1.81
TOP3A-204ENST00000472959 SLC4A10Q6U841 1118 aa26.37■■□□□ 1.81
TOP3A-204ENST00000472959 API5Q9BZZ5 524 aaKnown RBP26.37■■□□□ 1.81
TOP3A-204ENST00000472959 KIAA1551Q9HCM1 1747 aa26.36■■□□□ 1.81
TOP3A-204ENST00000472959 ALDH1L1O75891 902 aa26.36■■□□□ 1.81
TOP3A-204ENST00000472959 HCLS1P14317 486 aaPredicted RBP26.36■■□□□ 1.81
TOP3A-204ENST00000472959 PELP1Q8IZL8 1130 aaKnown RBP26.36■■□□□ 1.81
TOP3A-204ENST00000472959 TTLL6Q8N841 843 aa26.36■■□□□ 1.81
TOP3A-204ENST00000472959 ZNF622Q969S3 477 aaKnown RBP eCLIP26.36■■□□□ 1.81
TOP3A-204ENST00000472959 IRS4O14654 1257 aaPredicted RBP26.35■■□□□ 1.81
TOP3A-204ENST00000472959 BCAR3O75815 825 aa26.35■■□□□ 1.81
TOP3A-204ENST00000472959 CNKSR1Q969H4 720 aa26.35■■□□□ 1.81
TOP3A-204ENST00000472959 SRCIN1Q9C0H9 1055 aa26.35■■□□□ 1.81
TOP3A-204ENST00000472959 ANKRD31Q8N7Z5 1873 aa26.34■■□□□ 1.81
TOP3A-204ENST00000472959 H7C1W4 665 aa26.34■■□□□ 1.81
TOP3A-204ENST00000472959 RTL5Q5HYW3 569 aaPredicted RBP26.34■■□□□ 1.81
TOP3A-204ENST00000472959 RPGRQ92834 1020 aaKnown RBP26.34■■□□□ 1.81
TOP3A-204ENST00000472959 BCS1LQ9Y276 419 aa26.34■■□□□ 1.81
TOP3A-204ENST00000472959 GRIN3BO60391 1043 aa26.33■■□□□ 1.81
TOP3A-204ENST00000472959 YBX3P16989 372 aaKnown RBP eCLIP26.33■■□□□ 1.81
TOP3A-204ENST00000472959 HOXA10P31260 410 aaPredicted RBP26.33■■□□□ 1.81
TOP3A-204ENST00000472959 WWC3Q9ULE0 1092 aa26.33■■□□□ 1.81
TOP3A-204ENST00000472959 CDHR2Q9BYE9 1310 aa26.33■■□□□ 1.81
TOP3A-204ENST00000472959 N4BP2Q86UW6 1770 aaPredicted RBP26.33■■□□□ 1.8
TOP3A-204ENST00000472959 ALDH1B1P30837 517 aa26.32■■□□□ 1.8
TOP3A-204ENST00000472959 C3orf67Q6ZVT6 689 aa26.32■■□□□ 1.8
TOP3A-204ENST00000472959 UBE3BQ7Z3V4 1068 aa26.31■■□□□ 1.8
TOP3A-204ENST00000472959 SF3B3Q15393 1217 aaKnown RBP26.3■■□□□ 1.8
TOP3A-204ENST00000472959 JARID2Q92833 1246 aaPredicted RBP26.3■■□□□ 1.8
TOP3A-204ENST00000472959 FRAT1Q92837 279 aaPredicted RBP26.3■■□□□ 1.8
TOP3A-204ENST00000472959 RBM17Q96I25 401 aaKnown RBP26.3■■□□□ 1.8
TOP3A-204ENST00000472959 PDE8AO60658 829 aa26.29■■□□□ 1.8
TOP3A-204ENST00000472959 CCT4P50991 539 aaKnown RBP26.29■■□□□ 1.8
TOP3A-204ENST00000472959 ATF7IPQ6VMQ6 1270 aa26.29■■□□□ 1.8
TOP3A-204ENST00000472959 CRAMP1Q96RY5 1269 aa26.29■■□□□ 1.8
TOP3A-204ENST00000472959 GRM8O00222 908 aa26.28■■□□□ 1.8
TOP3A-204ENST00000472959 ZKSCAN2Q63HK3 967 aa26.28■■□□□ 1.8
TOP3A-204ENST00000472959 C9orf78Q9NZ63 289 aaPredicted RBP26.28■■□□□ 1.8
TOP3A-204ENST00000472959 RCAN3Q9UKA8 241 aa26.28■■□□□ 1.8
TOP3A-204ENST00000472959 CASP7P55210 303 aa26.27■■□□□ 1.8
TOP3A-204ENST00000472959 PRPF40BQ6NWY9 871 aaKnown RBP26.27■■□□□ 1.8
TOP3A-204ENST00000472959 TNRC6CQ9HCJ0 1690 aaKnown RBP26.27■■□□□ 1.8
TOP3A-204ENST00000472959 TRIM27P14373 513 aa26.26■■□□□ 1.79
TOP3A-204ENST00000472959 DDX46Q7L014 1031 aaKnown RBP26.26■■□□□ 1.79
TOP3A-204ENST00000472959 PLA2G12BQ9BX93 195 aa26.26■■□□□ 1.79
TOP3A-204ENST00000472959 DLEC1Q9Y238 1755 aa26.25■■□□□ 1.79
TOP3A-204ENST00000472959 COL11A2P13942 1736 aaPredicted RBP26.25■■□□□ 1.79
TOP3A-204ENST00000472959 BRCA1P38398 1863 aaKnown RBP26.24■■□□□ 1.79
TOP3A-204ENST00000472959 ABCC4O15439 1325 aa26.24■■□□□ 1.79
TOP3A-204ENST00000472959 CCDC152Q4G0S7 254 aa26.24■■□□□ 1.79
TOP3A-204ENST00000472959 UTYO14607 1347 aa26.23■■□□□ 1.79
TOP3A-204ENST00000472959 CTSWP56202 376 aa26.23■■□□□ 1.79
TOP3A-204ENST00000472959 SOGA3Q5TF21 947 aa26.23■■□□□ 1.79
TOP3A-204ENST00000472959 INTS3Q68E01 1043 aaKnown RBP26.23■■□□□ 1.79
TOP3A-204ENST00000472959 BBOX1O75936 387 aa26.22■■□□□ 1.79
TOP3A-204ENST00000472959 C21orf2O43822 256 aa26.21■■□□□ 1.79
TOP3A-204ENST00000472959 TTLL11Q8NHH1 800 aa26.21■■□□□ 1.79
TOP3A-204ENST00000472959 C7orf43Q8WVR3 580 aa26.21■■□□□ 1.79
TOP3A-204ENST00000472959 USP44Q9H0E7 712 aa26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms