RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 C8orf34Q49A92 452 aa8.31□□□□□ -1.08
PRPF40A-208ENST00000472760 TRIM22Q8IYM9 498 aa8.31□□□□□ -1.08
PRPF40A-208ENST00000472760 DMRTB1Q96MA1 342 aa8.31□□□□□ -1.08
PRPF40A-208ENST00000472760 BRD7Q9NPI1 651 aa8.31□□□□□ -1.08
PRPF40A-208ENST00000472760 USP20Q9Y2K6 914 aa8.31□□□□□ -1.08
PRPF40A-208ENST00000472760 PCDHGC4Q9Y5F7 938 aa8.31□□□□□ -1.08
PRPF40A-208ENST00000472760 LCE2BO14633 110 aa8.3□□□□□ -1.08
PRPF40A-208ENST00000472760 ITGA6P23229 1130 aa8.3□□□□□ -1.08
PRPF40A-208ENST00000472760 EHHADHQ08426 723 aa8.3□□□□□ -1.08
PRPF40A-208ENST00000472760 GMCL1Q96IK5 515 aa8.3□□□□□ -1.08
PRPF40A-208ENST00000472760 CUEDC1Q9NWM3 386 aaPredicted RBP8.3□□□□□ -1.08
PRPF40A-208ENST00000472760 FNDC3AQ9Y2H6 1198 aaKnown RBP8.3□□□□□ -1.08
PRPF40A-208ENST00000472760 KHNYNO15037 678 aaKnown RBP8.29□□□□□ -1.08
PRPF40A-208ENST00000472760 PLCB3Q01970 1234 aa8.29□□□□□ -1.08
PRPF40A-208ENST00000472760 NPAS4Q8IUM7 802 aa8.29□□□□□ -1.08
PRPF40A-208ENST00000472760 GJD3Q8N144 294 aa8.29□□□□□ -1.08
PRPF40A-208ENST00000472760 FAM129BQ96TA1 746 aa8.29□□□□□ -1.08
PRPF40A-208ENST00000472760 AMOTL2Q9Y2J4 779 aa8.29□□□□□ -1.08
PRPF40A-208ENST00000472760 DCDC2BA2VCK2 349 aa8.28□□□□□ -1.08
PRPF40A-208ENST00000472760 PPFIA3O75145 1194 aa8.28□□□□□ -1.08
PRPF40A-208ENST00000472760 THBS1P07996 1170 aa8.28□□□□□ -1.08
PRPF40A-208ENST00000472760 FAM157BP0CG42 384 aa8.28□□□□□ -1.08
PRPF40A-208ENST00000472760 GGNBP2Q9H3C7 697 aa8.28□□□□□ -1.08
PRPF40A-208ENST00000472760 KCNH4Q9UQ05 1017 aa8.28□□□□□ -1.08
PRPF40A-208ENST00000472760 CDC14CA4D256 554 aa8.27□□□□□ -1.09
PRPF40A-208ENST00000472760 POTECB2RU33 542 aa8.27□□□□□ -1.09
PRPF40A-208ENST00000472760 UBAP1LF5GYI3 381 aa8.27□□□□□ -1.09
PRPF40A-208ENST00000472760 FOXR1Q6PIV2 292 aa8.27□□□□□ -1.09
PRPF40A-208ENST00000472760 GTPBP3Q969Y2 492 aaKnown RBP8.27□□□□□ -1.09
PRPF40A-208ENST00000472760 ZNF837Q96EG3 531 aaPredicted RBP8.27□□□□□ -1.09
PRPF40A-208ENST00000472760 BCL2L13Q9BXK5 485 aa8.27□□□□□ -1.09
PRPF40A-208ENST00000472760 NIF3L1Q9GZT8 377 aa8.27□□□□□ -1.09
PRPF40A-208ENST00000472760 A6NHS1 94 aa8.26□□□□□ -1.09
PRPF40A-208ENST00000472760 GPR182O15218 404 aa8.26□□□□□ -1.09
PRPF40A-208ENST00000472760 TREHO43280 583 aa8.26□□□□□ -1.09
PRPF40A-208ENST00000472760 BNIP3LO60238 219 aa8.26□□□□□ -1.09
PRPF40A-208ENST00000472760 XYLBO75191 536 aa8.26□□□□□ -1.09
PRPF40A-208ENST00000472760 MAPTP10636 758 aaKnown RBP8.26□□□□□ -1.09
PRPF40A-208ENST00000472760 TNP2Q05952 138 aa8.26□□□□□ -1.09
PRPF40A-208ENST00000472760 SFSWAPQ12872 951 aaKnown RBP8.26□□□□□ -1.09
PRPF40A-208ENST00000472760 UBAP2LQ14157 1087 aaKnown RBP8.26□□□□□ -1.09
PRPF40A-208ENST00000472760 COL19A1Q14993 1142 aa8.26□□□□□ -1.09
PRPF40A-208ENST00000472760 PHF24Q9UPV7 400 aa8.26□□□□□ -1.09
PRPF40A-208ENST00000472760 KCNMB2Q9Y691 235 aa8.26□□□□□ -1.09
PRPF40A-208ENST00000472760 EFSO43281 561 aa8.25□□□□□ -1.09
PRPF40A-208ENST00000472760 NEFLP07196 543 aa8.25□□□□□ -1.09
PRPF40A-208ENST00000472760 KCNQ4P56696 695 aa8.25□□□□□ -1.09
PRPF40A-208ENST00000472760 LAMC2Q13753 1193 aa8.25□□□□□ -1.09
PRPF40A-208ENST00000472760 EAPPQ56P03 285 aaPredicted RBP8.25□□□□□ -1.09
PRPF40A-208ENST00000472760 ZNF438Q7Z4V0 828 aa8.25□□□□□ -1.09
PRPF40A-208ENST00000472760 NPM2Q86SE8 214 aaKnown RBP8.25□□□□□ -1.09
PRPF40A-208ENST00000472760 VWA5B2Q8N398 1253 aa8.25□□□□□ -1.09
PRPF40A-208ENST00000472760 ALKBH8Q96BT7 664 aaKnown RBP8.25□□□□□ -1.09
PRPF40A-208ENST00000472760 TRERF1Q96PN7 1200 aa8.25□□□□□ -1.09
PRPF40A-208ENST00000472760 C11orf16Q9NQ32 467 aa8.25□□□□□ -1.09
PRPF40A-208ENST00000472760 MARK1Q9P0L2 795 aa8.25□□□□□ -1.09
PRPF40A-208ENST00000472760 IGHA2P01877 340 aa8.24□□□□□ -1.09
PRPF40A-208ENST00000472760 GRNP28799 593 aaKnown RBP8.24□□□□□ -1.09
PRPF40A-208ENST00000472760 MAPK8P45983 427 aa8.24□□□□□ -1.09
PRPF40A-208ENST00000472760 DSC3Q14574 896 aa8.24□□□□□ -1.09
PRPF40A-208ENST00000472760 TRIP4Q15650 581 aaPredicted RBP8.24□□□□□ -1.09
PRPF40A-208ENST00000472760 ZNF326Q5BKZ1 582 aaKnown RBP8.24□□□□□ -1.09
PRPF40A-208ENST00000472760 PDE12Q6L8Q7 609 aaKnown RBP8.24□□□□□ -1.09
PRPF40A-208ENST00000472760 SV2AQ7L0J3 742 aa8.24□□□□□ -1.09
PRPF40A-208ENST00000472760 ABHD17AQ96GS6 310 aa8.24□□□□□ -1.09
PRPF40A-208ENST00000472760 NDFIP2Q9NV92 336 aa8.24□□□□□ -1.09
PRPF40A-208ENST00000472760 ATXN7L1Q9ULK2 861 aaPredicted RBP8.24□□□□□ -1.09
PRPF40A-208ENST00000472760 RBM47A0AV96 593 aaKnown RBP8.23□□□□□ -1.09
PRPF40A-208ENST00000472760 P4HBP07237 508 aaKnown RBP8.23□□□□□ -1.09
PRPF40A-208ENST00000472760 RBM25P49756 843 aaKnown RBP8.23□□□□□ -1.09
PRPF40A-208ENST00000472760 FMR1Q06787 632 aaKnown RBP eCLIP8.23□□□□□ -1.09
PRPF40A-208ENST00000472760 CCINQ13939 588 aa8.23□□□□□ -1.09
PRPF40A-208ENST00000472760 XKR5Q6UX68 686 aa8.23□□□□□ -1.09
PRPF40A-208ENST00000472760 GIPC2Q8TF65 315 aa8.23□□□□□ -1.09
PRPF40A-208ENST00000472760 CFHR5Q9BXR6 569 aa8.23□□□□□ -1.09
PRPF40A-208ENST00000472760 ELP3Q9H9T3 547 aa8.23□□□□□ -1.09
PRPF40A-208ENST00000472760 GPR25O00155 361 aa8.22□□□□□ -1.09
PRPF40A-208ENST00000472760 EGFRP00533 1210 aa8.22□□□□□ -1.09
PRPF40A-208ENST00000472760 NLRP13Q86W25 1043 aa8.22□□□□□ -1.09
PRPF40A-208ENST00000472760 PNMA5Q96PV4 448 aa8.22□□□□□ -1.09
PRPF40A-208ENST00000472760 STRN4Q9NRL3 753 aa8.22□□□□□ -1.09
PRPF40A-208ENST00000472760 TNFRSF21O75509 655 aa8.21□□□□□ -1.1
PRPF40A-208ENST00000472760 SASH3O75995 380 aa8.21□□□□□ -1.1
PRPF40A-208ENST00000472760 CD33P20138 364 aa8.21□□□□□ -1.1
PRPF40A-208ENST00000472760 FGFR3P22607 806 aa8.21□□□□□ -1.1
PRPF40A-208ENST00000472760 TTC39BQ5VTQ0 682 aaPredicted RBP8.21□□□□□ -1.1
PRPF40A-208ENST00000472760 KRT25Q7Z3Z0 450 aa8.21□□□□□ -1.1
PRPF40A-208ENST00000472760 FBXO33Q7Z6M2 555 aa8.21□□□□□ -1.1
PRPF40A-208ENST00000472760 NANOS1Q8WY41 292 aaKnown RBP8.21□□□□□ -1.1
PRPF40A-208ENST00000472760 ZNF428Q96B54 188 aa8.21□□□□□ -1.1
PRPF40A-208ENST00000472760 GSX2Q9BZM3 304 aa8.21□□□□□ -1.1
PRPF40A-208ENST00000472760 NXF1Q9UBU9 619 aaKnown RBP8.21□□□□□ -1.1
PRPF40A-208ENST00000472760 FGD1P98174 961 aa8.2□□□□□ -1.1
PRPF40A-208ENST00000472760 ATP2B2Q01814 1243 aa8.2□□□□□ -1.1
PRPF40A-208ENST00000472760 SPEM2Q0P670 501 aa8.2□□□□□ -1.1
PRPF40A-208ENST00000472760 ORC1Q13415 861 aa8.2□□□□□ -1.1
PRPF40A-208ENST00000472760 ZNF787Q6DD87 383 aa8.2□□□□□ -1.1
PRPF40A-208ENST00000472760 TMEM63CQ9P1W3 806 aa8.2□□□□□ -1.1
PRPF40A-208ENST00000472760 PNMA6FA0A0J9YX94 578 aa8.19□□□□□ -1.1
PRPF40A-208ENST00000472760 PHACTR2O75167 634 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms