RNA–Protein interactions for RNA: ENST00000472627.1

SMURF1-203, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 2

Gene SMURF1, Length 825 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-203ENST00000472627 ADARB2Q9NS39 739 aaKnown RBP18.67■□□□□ 0.58
SMURF1-203ENST00000472627 TSKSQ9UJT2 592 aa18.67■□□□□ 0.58
SMURF1-203ENST00000472627 EPS15P42566 896 aa18.66■□□□□ 0.58
SMURF1-203ENST00000472627 CRY2Q49AN0 593 aa18.66■□□□□ 0.58
SMURF1-203ENST00000472627 CST9Q5W186 159 aa18.66■□□□□ 0.58
SMURF1-203ENST00000472627 TRPM7Q96QT4 1865 aa18.66■□□□□ 0.58
SMURF1-203ENST00000472627 TRAF5O00463 557 aa18.65■□□□□ 0.58
SMURF1-203ENST00000472627 KCNQ3O43525 872 aa18.65■□□□□ 0.58
SMURF1-203ENST00000472627 AOC2O75106 756 aa18.65■□□□□ 0.58
SMURF1-203ENST00000472627 CELF2O95319 508 aaKnown RBP18.65■□□□□ 0.58
SMURF1-203ENST00000472627 CC2D1BQ5T0F9 858 aaKnown RBP18.65■□□□□ 0.58
SMURF1-203ENST00000472627 DGKZQ13574 1117 aa18.64■□□□□ 0.57
SMURF1-203ENST00000472627 SAPCD2Q86UD0 394 aa18.64■□□□□ 0.57
SMURF1-203ENST00000472627 RBM17Q96I25 401 aaKnown RBP18.64■□□□□ 0.57
SMURF1-203ENST00000472627 VPS33BQ9H267 617 aa18.63■□□□□ 0.57
SMURF1-203ENST00000472627 SNED1Q8TER0 1413 aa18.63■□□□□ 0.57
SMURF1-203ENST00000472627 PPEF1O14829 653 aaPredicted RBP18.62■□□□□ 0.57
SMURF1-203ENST00000472627 PPIP5K2O43314 1243 aa18.62■□□□□ 0.57
SMURF1-203ENST00000472627 HOXA10P31260 410 aaPredicted RBP18.62■□□□□ 0.57
SMURF1-203ENST00000472627 FMR1Q06787 632 aaKnown RBP eCLIP18.62■□□□□ 0.57
SMURF1-203ENST00000472627 GPRC5DQ9NZD1 345 aa18.62■□□□□ 0.57
SMURF1-203ENST00000472627 KIF7Q2M1P5 1343 aa18.62■□□□□ 0.57
SMURF1-203ENST00000472627 LTBP1Q14766 1721 aa18.62■□□□□ 0.57
SMURF1-203ENST00000472627 RIC1Q4ADV7 1423 aa18.61■□□□□ 0.57
SMURF1-203ENST00000472627 CDHR2Q9BYE9 1310 aa18.61■□□□□ 0.57
SMURF1-203ENST00000472627 PRAMEF22A3QJZ6 481 aa18.61■□□□□ 0.57
SMURF1-203ENST00000472627 TRIM26Q12899 539 aaPredicted RBP18.61■□□□□ 0.57
SMURF1-203ENST00000472627 NOGQ13253 232 aa18.61■□□□□ 0.57
SMURF1-203ENST00000472627 KIF6Q6ZMV9 814 aa18.61■□□□□ 0.57
SMURF1-203ENST00000472627 SUPT20HQ8NEM7 779 aa18.61■□□□□ 0.57
SMURF1-203ENST00000472627 CFAP53Q96M91 514 aa18.61■□□□□ 0.57
SMURF1-203ENST00000472627 COL3A1P02461 1466 aaPredicted RBP18.6■□□□□ 0.57
SMURF1-203ENST00000472627 IBTKQ9P2D0 1353 aaPredicted RBP18.6■□□□□ 0.57
SMURF1-203ENST00000472627 NBPF26B4DH59 902 aa18.6■□□□□ 0.57
SMURF1-203ENST00000472627 ERVV-1B6SEH8 477 aa18.6■□□□□ 0.57
SMURF1-203ENST00000472627 PRKAR2BP31323 418 aa18.6■□□□□ 0.57
SMURF1-203ENST00000472627 NBPF10Q6P3W6 841 aaKnown RBP18.6■□□□□ 0.57
SMURF1-203ENST00000472627 NUTM1Q86Y26 1132 aa18.6■□□□□ 0.57
SMURF1-203ENST00000472627 NBPF15Q8N660 670 aa18.6■□□□□ 0.57
SMURF1-203ENST00000472627 ZC3H15Q8WU90 426 aaKnown RBP18.6■□□□□ 0.57
SMURF1-203ENST00000472627 CRAMP1Q96RY5 1269 aa18.6■□□□□ 0.57
SMURF1-203ENST00000472627 ABCC12Q96J65 1359 aa18.59■□□□□ 0.57
SMURF1-203ENST00000472627 HLFQ16534 295 aa18.59■□□□□ 0.57
SMURF1-203ENST00000472627 ZNF408Q9H9D4 720 aa18.59■□□□□ 0.57
SMURF1-203ENST00000472627 NUDCQ9Y266 331 aa18.59■□□□□ 0.57
SMURF1-203ENST00000472627 COL4A5P29400 1685 aa18.58■□□□□ 0.57
SMURF1-203ENST00000472627 CIAPIN1Q6FI81 312 aa18.58■□□□□ 0.56
SMURF1-203ENST00000472627 CDC37L1Q7L3B6 337 aa18.58■□□□□ 0.56
SMURF1-203ENST00000472627 BCL2L13Q9BXK5 485 aa18.58■□□□□ 0.56
SMURF1-203ENST00000472627 ZNRF3Q9ULT6 936 aa18.58■□□□□ 0.56
SMURF1-203ENST00000472627 NPC1L1Q9UHC9 1359 aa18.57■□□□□ 0.56
SMURF1-203ENST00000472627 TCERG1O14776 1098 aaKnown RBP18.57■□□□□ 0.56
SMURF1-203ENST00000472627 PHACTR3Q96KR7 559 aa18.57■□□□□ 0.56
SMURF1-203ENST00000472627 GLIS2Q9BZE0 524 aaPredicted RBP18.57■□□□□ 0.56
SMURF1-203ENST00000472627 MAP3K15Q6ZN16 1313 aa18.56■□□□□ 0.56
SMURF1-203ENST00000472627 HTATSF1O43719 755 aaKnown RBP18.56■□□□□ 0.56
SMURF1-203ENST00000472627 TNIP1Q15025 636 aa18.56■□□□□ 0.56
SMURF1-203ENST00000472627 AOC3Q16853 763 aa18.56■□□□□ 0.56
SMURF1-203ENST00000472627 MCM10Q7L590 875 aa18.56■□□□□ 0.56
SMURF1-203ENST00000472627 RSPH6AQ9H0K4 717 aa18.56■□□□□ 0.56
SMURF1-203ENST00000472627 GMPSP49915 693 aaPredicted RBP18.55■□□□□ 0.56
SMURF1-203ENST00000472627 PPP1R42Q7Z4L9 355 aa18.55■□□□□ 0.56
SMURF1-203ENST00000472627 NGEFQ8N5V2 710 aa18.55■□□□□ 0.56
SMURF1-203ENST00000472627 NLRP3Q96P20 1036 aa18.55■□□□□ 0.56
SMURF1-203ENST00000472627 PGAP2Q9UHJ9 254 aa18.55■□□□□ 0.56
SMURF1-203ENST00000472627 CASP8AP2Q9UKL3 1982 aa18.54■□□□□ 0.56
SMURF1-203ENST00000472627 PER1O15534 1290 aaPredicted RBP18.54■□□□□ 0.56
SMURF1-203ENST00000472627 HUNKP57058 714 aa18.54■□□□□ 0.56
SMURF1-203ENST00000472627 CXCL9Q07325 125 aa18.54■□□□□ 0.56
SMURF1-203ENST00000472627 TAF7Q15545 349 aaPredicted RBP18.54■□□□□ 0.56
SMURF1-203ENST00000472627 SAGE1Q9NXZ1 904 aa18.54■□□□□ 0.56
SMURF1-203ENST00000472627 ATP6V0A2Q9Y487 856 aa18.54■□□□□ 0.56
SMURF1-203ENST00000472627 H7C1D1 291 aa18.53■□□□□ 0.56
SMURF1-203ENST00000472627 GPTP24298 496 aa18.53■□□□□ 0.56
SMURF1-203ENST00000472627 PDE4DIPQ5VU43 2346 aa18.53■□□□□ 0.56
SMURF1-203ENST00000472627 DPP8Q6V1X1 898 aaPredicted RBP18.53■□□□□ 0.56
SMURF1-203ENST00000472627 PNISRQ8TF01 805 aaKnown RBP18.53■□□□□ 0.56
SMURF1-203ENST00000472627 LAMB4A4D0S4 1761 aa18.53■□□□□ 0.56
SMURF1-203ENST00000472627 NEFMP07197 916 aa18.52■□□□□ 0.56
SMURF1-203ENST00000472627 CNGB1Q14028 1251 aaPredicted RBP18.52■□□□□ 0.56
SMURF1-203ENST00000472627 PARP10Q53GL7 1025 aa18.52■□□□□ 0.56
SMURF1-203ENST00000472627 PCGF6Q9BYE7 350 aa18.52■□□□□ 0.56
SMURF1-203ENST00000472627 U2AF1L5P0DN76 240 aaPredicted RBP18.51■□□□□ 0.55
SMURF1-203ENST00000472627 U2AF1Q01081 240 aaKnown RBP eCLIP18.51■□□□□ 0.55
SMURF1-203ENST00000472627 CCDC102AQ96A19 550 aa18.51■□□□□ 0.55
SMURF1-203ENST00000472627 RTFDC1Q9BY42 306 aaPredicted RBP18.51■□□□□ 0.55
SMURF1-203ENST00000472627 RRP7AQ9Y3A4 280 aaKnown RBP18.51■□□□□ 0.55
SMURF1-203ENST00000472627 PRPF38BQ5VTL8 546 aaKnown RBP18.5■□□□□ 0.55
SMURF1-203ENST00000472627 SUSD4Q5VX71 490 aa18.5■□□□□ 0.55
SMURF1-203ENST00000472627 ZBTB3Q9H5J0 574 aa18.5■□□□□ 0.55
SMURF1-203ENST00000472627 UBN2Q6ZU65 1347 aa18.49■□□□□ 0.55
SMURF1-203ENST00000472627 BBOX1O75936 387 aa18.49■□□□□ 0.55
SMURF1-203ENST00000472627 NTSR2O95665 410 aa18.49■□□□□ 0.55
SMURF1-203ENST00000472627 SOX10P56693 466 aa18.49■□□□□ 0.55
SMURF1-203ENST00000472627 KIAA2012Q0VF49 1180 aa18.49■□□□□ 0.55
SMURF1-203ENST00000472627 RGMBQ6NW40 437 aa18.49■□□□□ 0.55
SMURF1-203ENST00000472627 MPNDQ8N594 471 aa18.49■□□□□ 0.55
SMURF1-203ENST00000472627 C2orf69Q8N8R5 385 aa18.49■□□□□ 0.55
SMURF1-203ENST00000472627 NUP98P52948 1817 aa18.49■□□□□ 0.55
SMURF1-203ENST00000472627 RAD17O75943 681 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms