RNA–Protein interactions for RNA: ENST00000472608.5

ABCF3-209, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 657 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-209ENST00000472608 CCDC146Q8IYE0 955 aa18.72■□□□□ 0.59
ABCF3-209ENST00000472608 GPR101Q96P66 508 aaPredicted RBP18.72■□□□□ 0.59
ABCF3-209ENST00000472608 BCORQ6W2J9 1755 aa18.72■□□□□ 0.59
ABCF3-209ENST00000472608 CCER2I3L3R5 266 aa18.71■□□□□ 0.59
ABCF3-209ENST00000472608 OLFM4Q6UX06 510 aa18.71■□□□□ 0.59
ABCF3-209ENST00000472608 NPM2Q86SE8 214 aaKnown RBP18.71■□□□□ 0.59
ABCF3-209ENST00000472608 SYNE4Q8N205 404 aa18.71■□□□□ 0.59
ABCF3-209ENST00000472608 FMNL2Q96PY5 1086 aa18.71■□□□□ 0.59
ABCF3-209ENST00000472608 PSMD1Q99460 953 aa18.71■□□□□ 0.59
ABCF3-209ENST00000472608 BEGAINQ9BUH8 593 aa18.71■□□□□ 0.59
ABCF3-209ENST00000472608 DLG5Q8TDM6 1919 aa18.7■□□□□ 0.58
ABCF3-209ENST00000472608 MAP2K2P36507 400 aa18.7■□□□□ 0.58
ABCF3-209ENST00000472608 TAF7Q15545 349 aaPredicted RBP18.7■□□□□ 0.58
ABCF3-209ENST00000472608 NCBP3Q53F19 620 aaKnown RBP18.7■□□□□ 0.58
ABCF3-209ENST00000472608 CST9Q5W186 159 aa18.7■□□□□ 0.58
ABCF3-209ENST00000472608 SIPA1L3O60292 1781 aaPredicted RBP18.69■□□□□ 0.58
ABCF3-209ENST00000472608 ALDH1B1P30837 517 aa18.69■□□□□ 0.58
ABCF3-209ENST00000472608 DCTN1Q14203 1278 aa18.69■□□□□ 0.58
ABCF3-209ENST00000472608 CYP4F22Q6NT55 531 aa18.69■□□□□ 0.58
ABCF3-209ENST00000472608 TPTE2Q6XPS3 522 aa18.69■□□□□ 0.58
ABCF3-209ENST00000472608 TLL2Q9Y6L7 1015 aa18.69■□□□□ 0.58
ABCF3-209ENST00000472608 BTBD11A6QL63 1104 aa18.68■□□□□ 0.58
ABCF3-209ENST00000472608 FMR1Q06787 632 aaKnown RBP eCLIP18.68■□□□□ 0.58
ABCF3-209ENST00000472608 LTBP1Q14766 1721 aa18.67■□□□□ 0.58
ABCF3-209ENST00000472608 APAF1O14727 1248 aa18.67■□□□□ 0.58
ABCF3-209ENST00000472608 CA12O43570 354 aa18.67■□□□□ 0.58
ABCF3-209ENST00000472608 SCNN1DP51172 638 aa18.67■□□□□ 0.58
ABCF3-209ENST00000472608 JDP2Q8WYK2 163 aa18.67■□□□□ 0.58
ABCF3-209ENST00000472608 BABAM1Q9NWV8 329 aa18.67■□□□□ 0.58
ABCF3-209ENST00000472608 ZNF652Q9Y2D9 606 aa18.67■□□□□ 0.58
ABCF3-209ENST00000472608 USP16Q9Y5T5 823 aa18.67■□□□□ 0.58
ABCF3-209ENST00000472608 TNRC18O15417 2968 aaPredicted RBP18.66■□□□□ 0.58
ABCF3-209ENST00000472608 CC2D2BQ6DHV5 1058 aa18.66■□□□□ 0.58
ABCF3-209ENST00000472608 USP50Q70EL3 339 aaPredicted RBP18.66■□□□□ 0.58
ABCF3-209ENST00000472608 MCOLN1Q9GZU1 580 aa18.66■□□□□ 0.58
ABCF3-209ENST00000472608 TRIM35Q9UPQ4 493 aa18.66■□□□□ 0.58
ABCF3-209ENST00000472608 PDE4DIPQ5VU43 2346 aa18.65■□□□□ 0.58
ABCF3-209ENST00000472608 LMOD1P29536 600 aaPredicted RBP18.65■□□□□ 0.58
ABCF3-209ENST00000472608 EPS15P42566 896 aa18.65■□□□□ 0.58
ABCF3-209ENST00000472608 EIF6P56537 245 aaKnown RBP18.65■□□□□ 0.58
ABCF3-209ENST00000472608 CRY2Q49AN0 593 aa18.65■□□□□ 0.58
ABCF3-209ENST00000472608 RRP7AQ9Y3A4 280 aaKnown RBP18.65■□□□□ 0.58
ABCF3-209ENST00000472608 COL4A5P29400 1685 aa18.65■□□□□ 0.58
ABCF3-209ENST00000472608 KCNQ3O43525 872 aa18.64■□□□□ 0.57
ABCF3-209ENST00000472608 NEUROD2Q15784 382 aa18.64■□□□□ 0.57
ABCF3-209ENST00000472608 HHIPL1Q96JK4 782 aa18.64■□□□□ 0.57
ABCF3-209ENST00000472608 TRPM7Q96QT4 1865 aa18.63■□□□□ 0.57
ABCF3-209ENST00000472608 TRAF5O00463 557 aa18.63■□□□□ 0.57
ABCF3-209ENST00000472608 AOC2O75106 756 aa18.63■□□□□ 0.57
ABCF3-209ENST00000472608 GRIPAP1Q4V328 841 aa18.63■□□□□ 0.57
ABCF3-209ENST00000472608 PAXIP1Q6ZW49 1069 aaPredicted RBP18.63■□□□□ 0.57
ABCF3-209ENST00000472608 SAPCD2Q86UD0 394 aa18.63■□□□□ 0.57
ABCF3-209ENST00000472608 TSKSQ9UJT2 592 aa18.63■□□□□ 0.57
ABCF3-209ENST00000472608 NIP7Q9Y221 180 aaKnown RBP eCLIP18.63■□□□□ 0.57
ABCF3-209ENST00000472608 PIP4K2AP48426 406 aaPredicted RBP18.62■□□□□ 0.57
ABCF3-209ENST00000472608 BRPF1P55201 1214 aaPredicted RBP18.62■□□□□ 0.57
ABCF3-209ENST00000472608 CCDC27Q2M243 656 aa18.62■□□□□ 0.57
ABCF3-209ENST00000472608 FAM9BQ8IZU0 186 aa18.62■□□□□ 0.57
ABCF3-209ENST00000472608 NGEFQ8N5V2 710 aa18.62■□□□□ 0.57
ABCF3-209ENST00000472608 THUMPD2Q9BTF0 503 aaKnown RBP18.62■□□□□ 0.57
ABCF3-209ENST00000472608 GJA3Q9Y6H8 435 aa18.62■□□□□ 0.57
ABCF3-209ENST00000472608 NBPF26B4DH59 902 aa18.6■□□□□ 0.57
ABCF3-209ENST00000472608 HOXA10P31260 410 aaPredicted RBP18.6■□□□□ 0.57
ABCF3-209ENST00000472608 CALD1Q05682 793 aaKnown RBP18.6■□□□□ 0.57
ABCF3-209ENST00000472608 GRM1Q13255 1194 aa18.6■□□□□ 0.57
ABCF3-209ENST00000472608 NBPF10Q6P3W6 841 aaKnown RBP18.6■□□□□ 0.57
ABCF3-209ENST00000472608 NBPF15Q8N660 670 aa18.6■□□□□ 0.57
ABCF3-209ENST00000472608 PRAMEF22A3QJZ6 481 aa18.59■□□□□ 0.57
ABCF3-209ENST00000472608 SNRPA1P09661 255 aaKnown RBP18.59■□□□□ 0.57
ABCF3-209ENST00000472608 PGAP2Q9UHJ9 254 aa18.59■□□□□ 0.57
ABCF3-209ENST00000472608 CASP8AP2Q9UKL3 1982 aa18.59■□□□□ 0.57
ABCF3-209ENST00000472608 CHL1O00533 1208 aa18.58■□□□□ 0.56
ABCF3-209ENST00000472608 MIER1Q8N108 512 aa18.58■□□□□ 0.56
ABCF3-209ENST00000472608 LARGE2Q8N3Y3 721 aa18.58■□□□□ 0.56
ABCF3-209ENST00000472608 ADARB2Q9NS39 739 aaKnown RBP18.58■□□□□ 0.56
ABCF3-209ENST00000472608 DGKZQ13574 1117 aa18.57■□□□□ 0.56
ABCF3-209ENST00000472608 HLFQ16534 295 aa18.57■□□□□ 0.56
ABCF3-209ENST00000472608 CFAP44Q96MT7 982 aa18.57■□□□□ 0.56
ABCF3-209ENST00000472608 MIS18AQ9NYP9 233 aa18.57■□□□□ 0.56
ABCF3-209ENST00000472608 GPRC5DQ9NZD1 345 aa18.57■□□□□ 0.56
ABCF3-209ENST00000472608 TSPYL4Q9UJ04 414 aa18.57■□□□□ 0.56
ABCF3-209ENST00000472608 CELF2O95319 508 aaKnown RBP18.56■□□□□ 0.56
ABCF3-209ENST00000472608 EIF4A1P60842 406 aaKnown RBP18.56■□□□□ 0.56
ABCF3-209ENST00000472608 VPS33BQ9H267 617 aa18.56■□□□□ 0.56
ABCF3-209ENST00000472608 RIC1Q4ADV7 1423 aa18.56■□□□□ 0.56
ABCF3-209ENST00000472608 ABCC12Q96J65 1359 aa18.55■□□□□ 0.56
ABCF3-209ENST00000472608 KDM3BQ7LBC6 1761 aa18.55■□□□□ 0.56
ABCF3-209ENST00000472608 FAM177BA6PVY3 158 aa18.55■□□□□ 0.56
ABCF3-209ENST00000472608 ZNF853P0CG23 659 aa18.55■□□□□ 0.56
ABCF3-209ENST00000472608 GTF2E1P29083 439 aaPredicted RBP18.55■□□□□ 0.56
ABCF3-209ENST00000472608 WWC1Q8IX03 1113 aa18.55■□□□□ 0.56
ABCF3-209ENST00000472608 CRAMP1Q96RY5 1269 aa18.55■□□□□ 0.56
ABCF3-209ENST00000472608 NYXQ9GZU5 481 aa18.55■□□□□ 0.56
ABCF3-209ENST00000472608 IFT57Q9NWB7 429 aa18.54■□□□□ 0.56
ABCF3-209ENST00000472608 GNAI1P63096 354 aa18.53■□□□□ 0.56
ABCF3-209ENST00000472608 CIAPIN1Q6FI81 312 aa18.53■□□□□ 0.56
ABCF3-209ENST00000472608 NIM1KQ8IY84 436 aa18.53■□□□□ 0.56
ABCF3-209ENST00000472608 ZC3H15Q8WU90 426 aaKnown RBP18.53■□□□□ 0.56
ABCF3-209ENST00000472608 GLIS2Q9BZE0 524 aaPredicted RBP18.53■□□□□ 0.56
ABCF3-209ENST00000472608 IBTKQ9P2D0 1353 aaPredicted RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms