RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 NEURL1BA8MQ27 555 aa15.96■□□□□ 0.14
SCAMP4-207ENST00000472442 CASC1Q6TDU7 716 aa15.96■□□□□ 0.14
SCAMP4-207ENST00000472442 KCPQ6ZWJ8 1503 aa15.96■□□□□ 0.14
SCAMP4-207ENST00000472442 LAMB4A4D0S4 1761 aa15.95■□□□□ 0.14
SCAMP4-207ENST00000472442 MBD3O95983 291 aa15.95■□□□□ 0.14
SCAMP4-207ENST00000472442 NUTM1Q86Y26 1132 aa15.95■□□□□ 0.14
SCAMP4-207ENST00000472442 MYD88Q99836 296 aa15.95■□□□□ 0.14
SCAMP4-207ENST00000472442 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.95■□□□□ 0.143e-7■■■□□ 16.4
SCAMP4-207ENST00000472442 NBPF26B4DH59 902 aa15.95■□□□□ 0.14
SCAMP4-207ENST00000472442 KIAA2012Q0VF49 1180 aa15.95■□□□□ 0.14
SCAMP4-207ENST00000472442 NBPF14Q5TI25 921 aa15.95■□□□□ 0.14
SCAMP4-207ENST00000472442 NBPF10Q6P3W6 841 aaKnown RBP15.95■□□□□ 0.14
SCAMP4-207ENST00000472442 NBPF15Q8N660 670 aa15.95■□□□□ 0.14
SCAMP4-207ENST00000472442 TOGARAM1Q9Y4F4 1720 aa15.95■□□□□ 0.14
SCAMP4-207ENST00000472442 PAPPAQ13219 1627 aa15.95■□□□□ 0.14
SCAMP4-207ENST00000472442 KIF1BPQ96EK5 621 aa15.94■□□□□ 0.14
SCAMP4-207ENST00000472442 BICC1Q9H694 974 aaKnown RBP15.94■□□□□ 0.14
SCAMP4-207ENST00000472442 LTBP4Q8N2S1 1624 aa15.94■□□□□ 0.14
SCAMP4-207ENST00000472442 AHDC1Q5TGY3 1603 aaPredicted RBP15.94■□□□□ 0.14
SCAMP4-207ENST00000472442 GCKRQ14397 625 aa15.94■□□□□ 0.14
SCAMP4-207ENST00000472442 PA2G4Q9UQ80 394 aaKnown RBP15.94■□□□□ 0.14
SCAMP4-207ENST00000472442 UNC5CLQ8IV45 518 aa15.93■□□□□ 0.14
SCAMP4-207ENST00000472442 JARID2Q92833 1246 aaPredicted RBP15.93■□□□□ 0.14
SCAMP4-207ENST00000472442 TSPY26PQ9H489 355 aa15.93■□□□□ 0.14
SCAMP4-207ENST00000472442 REC8O95072 547 aa15.93■□□□□ 0.14
SCAMP4-207ENST00000472442 NEXNQ0ZGT2 675 aa15.93■□□□□ 0.14
SCAMP4-207ENST00000472442 DNTTIP2Q5QJE6 756 aaKnown RBP15.93■□□□□ 0.14
SCAMP4-207ENST00000472442 MPNDQ8N594 471 aa15.93■□□□□ 0.14
SCAMP4-207ENST00000472442 PTCD1O75127 700 aaKnown RBP15.93■□□□□ 0.14
SCAMP4-207ENST00000472442 COL16A1Q07092 1604 aaPredicted RBP15.93■□□□□ 0.14
SCAMP4-207ENST00000472442 TNS2Q63HR2 1409 aa15.93■□□□□ 0.14
SCAMP4-207ENST00000472442 COL14A1Q05707 1796 aaKnown RBP15.92■□□□□ 0.14
SCAMP4-207ENST00000472442 COL22A1Q8NFW1 1626 aaPredicted RBP15.92■□□□□ 0.14
SCAMP4-207ENST00000472442 PI4K2BQ8TCG2 481 aa15.92■□□□□ 0.14
SCAMP4-207ENST00000472442 TMX3Q96JJ7 454 aa15.92■□□□□ 0.14
SCAMP4-207ENST00000472442 CCDC94Q9BW85 323 aaPredicted RBP15.92■□□□□ 0.14
SCAMP4-207ENST00000472442 AOX1Q06278 1338 aa15.91■□□□□ 0.14
SCAMP4-207ENST00000472442 HSP90AB4PQ58FF6 505 aa15.91■□□□□ 0.14
SCAMP4-207ENST00000472442 EPHA10Q5JZY3 1008 aa15.91■□□□□ 0.14
SCAMP4-207ENST00000472442 TSC1Q92574 1164 aa15.91■□□□□ 0.14
SCAMP4-207ENST00000472442 HDAC5Q9UQL6 1122 aa15.91■□□□□ 0.14
SCAMP4-207ENST00000472442 DISP2A7MBM2 1401 aa15.91■□□□□ 0.14
SCAMP4-207ENST00000472442 ARFGEF2Q9Y6D5 1785 aa15.91■□□□□ 0.14
SCAMP4-207ENST00000472442 A1BGP04217 495 aa15.91■□□□□ 0.14
SCAMP4-207ENST00000472442 NEK4P51957 841 aa15.91■□□□□ 0.14
SCAMP4-207ENST00000472442 MYRIPQ8NFW9 859 aa15.91■□□□□ 0.14
SCAMP4-207ENST00000472442 ZHX1Q9UKY1 873 aaPredicted RBP15.91■□□□□ 0.14
SCAMP4-207ENST00000472442 ERC2O15083 957 aa15.9■□□□□ 0.14
SCAMP4-207ENST00000472442 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.9■□□□□ 0.14
SCAMP4-207ENST00000472442 BRD1O95696 1058 aa15.9■□□□□ 0.14
SCAMP4-207ENST00000472442 PLBD2Q8NHP8 589 aa15.9■□□□□ 0.14
SCAMP4-207ENST00000472442 RILPL2Q969X0 211 aa15.9■□□□□ 0.14
SCAMP4-207ENST00000472442 TRIM6-TRIM34B2RNG4 842 aa15.9■□□□□ 0.14
SCAMP4-207ENST00000472442 ATP5J2-PTCD1G3V325 749 aa15.9■□□□□ 0.14
SCAMP4-207ENST00000472442 FOXD4L6Q3SYB3 417 aaPredicted RBP15.9■□□□□ 0.14
SCAMP4-207ENST00000472442 FOXD4L3Q6VB84 417 aaPredicted RBP15.9■□□□□ 0.14
SCAMP4-207ENST00000472442 CHMLP26374 656 aa15.89■□□□□ 0.13
SCAMP4-207ENST00000472442 TTLL7Q6ZT98 887 aa15.89■□□□□ 0.13
SCAMP4-207ENST00000472442 NOL8Q76FK4 1167 aaKnown RBP15.89■□□□□ 0.13
SCAMP4-207ENST00000472442 ZNF830Q96NB3 372 aaPredicted RBP15.89■□□□□ 0.13
SCAMP4-207ENST00000472442 OS9Q13438 667 aaPredicted RBP15.89■□□□□ 0.13
SCAMP4-207ENST00000472442 TMOD3Q9NYL9 352 aa15.89■□□□□ 0.13
SCAMP4-207ENST00000472442 PIGBQ92521 554 aa15.88■□□□□ 0.13
SCAMP4-207ENST00000472442 SASH1O94885 1247 aa15.88■□□□□ 0.13
SCAMP4-207ENST00000472442 MAP4K4O95819 1239 aaPredicted RBP15.88■□□□□ 0.13
SCAMP4-207ENST00000472442 SYAP1Q96A49 352 aaPredicted RBP15.88■□□□□ 0.13
SCAMP4-207ENST00000472442 ESYT1Q9BSJ8 1104 aa15.88■□□□□ 0.13
SCAMP4-207ENST00000472442 GDPD2Q9HCC8 539 aa15.88■□□□□ 0.13
SCAMP4-207ENST00000472442 ASAP1Q9ULH1 1129 aa15.88■□□□□ 0.13
SCAMP4-207ENST00000472442 USP42Q9H9J4 1324 aaKnown RBP15.88■□□□□ 0.13
SCAMP4-207ENST00000472442 KLHDC4Q8TBB5 520 aa15.87■□□□□ 0.13
SCAMP4-207ENST00000472442 AFDNP55196 1824 aaKnown RBP15.87■□□□□ 0.13
SCAMP4-207ENST00000472442 ZNF710Q8N1W2 664 aa15.87■□□□□ 0.13
SCAMP4-207ENST00000472442 PODXL2Q9NZ53 605 aa15.87■□□□□ 0.13
SCAMP4-207ENST00000472442 GADD45BO75293 160 aaPredicted RBP15.87■□□□□ 0.13
SCAMP4-207ENST00000472442 CASP7P55210 303 aa15.87■□□□□ 0.13
SCAMP4-207ENST00000472442 C17orf53Q8N3J3 647 aaPredicted RBP15.87■□□□□ 0.13
SCAMP4-207ENST00000472442 IL25Q9H293 177 aa15.87■□□□□ 0.13
SCAMP4-207ENST00000472442 UBE3BQ7Z3V4 1068 aa15.86■□□□□ 0.13
SCAMP4-207ENST00000472442 CLASRPQ8N2M8 674 aaKnown RBP15.86■□□□□ 0.13
SCAMP4-207ENST00000472442 PIBF1Q8WXW3 757 aa15.86■□□□□ 0.13
SCAMP4-207ENST00000472442 USP25Q9UHP3 1055 aa15.86■□□□□ 0.13
SCAMP4-207ENST00000472442 NUP188Q5SRE5 1749 aa15.85■□□□□ 0.13
SCAMP4-207ENST00000472442 A0A087WZG4 1122 aa15.85■□□□□ 0.13
SCAMP4-207ENST00000472442 DMTNQ08495 405 aa15.85■□□□□ 0.13
SCAMP4-207ENST00000472442 ERC1Q8IUD2 1116 aa15.85■□□□□ 0.13
SCAMP4-207ENST00000472442 ATG3Q9NT62 314 aa15.85■□□□□ 0.13
SCAMP4-207ENST00000472442 NOLC1Q14978 699 aaKnown RBP eCLIP15.85■□□□□ 0.13
SCAMP4-207ENST00000472442 PRIMPOLQ96LW4 560 aa15.85■□□□□ 0.13
SCAMP4-207ENST00000472442 SIL1Q9H173 461 aa15.85■□□□□ 0.13
SCAMP4-207ENST00000472442 TTC12Q9H892 705 aaPredicted RBP15.85■□□□□ 0.13
SCAMP4-207ENST00000472442 ITGB4P16144 1822 aa15.84■□□□□ 0.13
SCAMP4-207ENST00000472442 COL15A1P39059 1388 aa15.84■□□□□ 0.13
SCAMP4-207ENST00000472442 TTC41PQ6P2S7 1318 aa15.84■□□□□ 0.13
SCAMP4-207ENST00000472442 FAM177BA6PVY3 158 aa15.84■□□□□ 0.13
SCAMP4-207ENST00000472442 ZSCAN20P17040 1043 aaPredicted RBP15.84■□□□□ 0.13
SCAMP4-207ENST00000472442 RFX5P48382 616 aaPredicted RBP15.84■□□□□ 0.13
SCAMP4-207ENST00000472442 CUL4AQ13619 759 aa15.84■□□□□ 0.13
SCAMP4-207ENST00000472442 RABL6Q3YEC7 729 aaPredicted RBP15.84■□□□□ 0.13
SCAMP4-207ENST00000472442 PLCH1Q4KWH8 1693 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms