RNA–Protein interactions for RNA: ENST00000471960.5

ARPC1A-204, Transcript of actin related protein 2/3 complex subunit 1A, humanhuman

TSL 3

Gene ARPC1A, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1A-204ENST00000471960 NYXQ9GZU5 481 aa18.05■□□□□ 0.48
ARPC1A-204ENST00000471960 CRY2Q49AN0 593 aa18.04■□□□□ 0.48
ARPC1A-204ENST00000471960 NLRP10Q86W26 655 aa18.04■□□□□ 0.48
ARPC1A-204ENST00000471960 PHAXQ9H814 394 aaKnown RBP18.04■□□□□ 0.48
ARPC1A-204ENST00000471960 LAMB2P55268 1798 aa18.04■□□□□ 0.48
ARPC1A-204ENST00000471960 DICER1Q9UPY3 1922 aaKnown RBP18.04■□□□□ 0.48
ARPC1A-204ENST00000471960 CALD1Q05682 793 aaKnown RBP18.03■□□□□ 0.48
ARPC1A-204ENST00000471960 TCIRG1Q13488 830 aa18.03■□□□□ 0.48
ARPC1A-204ENST00000471960 CCDC27Q2M243 656 aa18.03■□□□□ 0.48
ARPC1A-204ENST00000471960 PARP10Q53GL7 1025 aa18.03■□□□□ 0.48
ARPC1A-204ENST00000471960 FAM9BQ8IZU0 186 aa18.03■□□□□ 0.48
ARPC1A-204ENST00000471960 DBF4Q9UBU7 674 aaPredicted RBP18.03■□□□□ 0.48
ARPC1A-204ENST00000471960 TCERG1O14776 1098 aaKnown RBP18.02■□□□□ 0.48
ARPC1A-204ENST00000471960 MAPK8IP2Q13387 824 aaPredicted RBP18.02■□□□□ 0.48
ARPC1A-204ENST00000471960 RIC1Q4ADV7 1423 aa18.02■□□□□ 0.48
ARPC1A-204ENST00000471960 UTP14AQ9BVJ6 771 aaKnown RBP18.02■□□□□ 0.48
ARPC1A-204ENST00000471960 ATP5J2-PTCD1G3V325 749 aa18.01■□□□□ 0.47
ARPC1A-204ENST00000471960 HCLS1P14317 486 aaPredicted RBP18.01■□□□□ 0.47
ARPC1A-204ENST00000471960 ANKRD13DQ6ZTN6 518 aa18.01■□□□□ 0.47
ARPC1A-204ENST00000471960 PPP1R42Q7Z4L9 355 aa18.01■□□□□ 0.47
ARPC1A-204ENST00000471960 PLBD2Q8NHP8 589 aa18.01■□□□□ 0.47
ARPC1A-204ENST00000471960 TAF1P21675 1872 aa18.01■□□□□ 0.47
ARPC1A-204ENST00000471960 SNED1Q8TER0 1413 aa18■□□□□ 0.47
ARPC1A-204ENST00000471960 TAOK3Q9H2K8 898 aa18■□□□□ 0.47
ARPC1A-204ENST00000471960 SPINK5Q9NQ38 1064 aaPredicted RBP18■□□□□ 0.47
ARPC1A-204ENST00000471960 HYPKQ9NX55 129 aa18■□□□□ 0.47
ARPC1A-204ENST00000471960 LTBP3Q9NS15 1303 aa17.99■□□□□ 0.47
ARPC1A-204ENST00000471960 HOXA10P31260 410 aaPredicted RBP17.99■□□□□ 0.47
ARPC1A-204ENST00000471960 SLC10A5Q5PT55 438 aa17.99■□□□□ 0.47
ARPC1A-204ENST00000471960 ISCA1Q9BUE6 129 aa17.99■□□□□ 0.47
ARPC1A-204ENST00000471960 RRAGCQ9HB90 399 aa17.99■□□□□ 0.47
ARPC1A-204ENST00000471960 DDX60Q8IY21 1712 aaKnown RBP17.98■□□□□ 0.47
ARPC1A-204ENST00000471960 CCDC93Q567U6 631 aa17.98■□□□□ 0.47
ARPC1A-204ENST00000471960 HSP90AB3PQ58FF7 597 aa17.98■□□□□ 0.47
ARPC1A-204ENST00000471960 RPGRQ92834 1020 aaKnown RBP17.98■□□□□ 0.47
ARPC1A-204ENST00000471960 ZNF277Q9NRM2 450 aaPredicted RBP17.98■□□□□ 0.47
ARPC1A-204ENST00000471960 TRMT112Q9UI30 125 aaKnown RBP17.98■□□□□ 0.47
ARPC1A-204ENST00000471960 COL4A1P02462 1669 aa17.98■□□□□ 0.47
ARPC1A-204ENST00000471960 ALDH1B1P30837 517 aa17.97■□□□□ 0.47
ARPC1A-204ENST00000471960 FANCIQ9NVI1 1328 aa17.97■□□□□ 0.47
ARPC1A-204ENST00000471960 COL4A5P29400 1685 aa17.96■□□□□ 0.47
ARPC1A-204ENST00000471960 RTL5Q5HYW3 569 aaPredicted RBP17.96■□□□□ 0.47
ARPC1A-204ENST00000471960 FAM89AQ96GI7 184 aa17.96■□□□□ 0.47
ARPC1A-204ENST00000471960 IL16Q14005 1332 aa17.96■□□□□ 0.46
ARPC1A-204ENST00000471960 KDM2BQ8NHM5 1336 aa17.96■□□□□ 0.46
ARPC1A-204ENST00000471960 GLTPD2A6NH11 291 aa17.95■□□□□ 0.46
ARPC1A-204ENST00000471960 POTECB2RU33 542 aa17.95■□□□□ 0.46
ARPC1A-204ENST00000471960 FKBP4Q02790 459 aaKnown RBP eCLIP17.95■□□□□ 0.46
ARPC1A-204ENST00000471960 SOGA3Q5TF21 947 aa17.95■□□□□ 0.46
ARPC1A-204ENST00000471960 G2E3Q7L622 706 aa17.95■□□□□ 0.46
ARPC1A-204ENST00000471960 RBM17Q96I25 401 aaKnown RBP17.95■□□□□ 0.46
ARPC1A-204ENST00000471960 NLRP3Q96P20 1036 aa17.95■□□□□ 0.46
ARPC1A-204ENST00000471960 CRAMP1Q96RY5 1269 aa17.95■□□□□ 0.46
ARPC1A-204ENST00000471960 ABCC4O15439 1325 aa17.95■□□□□ 0.46
ARPC1A-204ENST00000471960 SH3TC1Q8TE82 1336 aa17.95■□□□□ 0.46
ARPC1A-204ENST00000471960 ZC3H4Q9UPT8 1303 aaKnown RBP17.95■□□□□ 0.46
ARPC1A-204ENST00000471960 TWISTNBQ3B726 338 aaPredicted RBP17.94■□□□□ 0.46
ARPC1A-204ENST00000471960 NCBP3Q53F19 620 aaKnown RBP17.94■□□□□ 0.46
ARPC1A-204ENST00000471960 CCDC30Q5VVM6 783 aa17.94■□□□□ 0.46
ARPC1A-204ENST00000471960 RIC3Q7Z5B4 369 aa17.94■□□□□ 0.46
ARPC1A-204ENST00000471960 JARID2Q92833 1246 aaPredicted RBP17.94■□□□□ 0.46
ARPC1A-204ENST00000471960 MYD88Q99836 296 aa17.94■□□□□ 0.46
ARPC1A-204ENST00000471960 PPEF1O14829 653 aaPredicted RBP17.93■□□□□ 0.46
ARPC1A-204ENST00000471960 GOLGA2Q08379 1002 aa17.93■□□□□ 0.46
ARPC1A-204ENST00000471960 RNF123Q5XPI4 1314 aa17.93■□□□□ 0.46
ARPC1A-204ENST00000471960 TOMM70O94826 608 aa17.92■□□□□ 0.46
ARPC1A-204ENST00000471960 DDNO94850 711 aaPredicted RBP17.92■□□□□ 0.46
ARPC1A-204ENST00000471960 EXOSC9Q06265 439 aaKnown RBP17.92■□□□□ 0.46
ARPC1A-204ENST00000471960 WDR63Q8IWG1 891 aa17.92■□□□□ 0.46
ARPC1A-204ENST00000471960 RTKN2Q8IZC4 609 aa17.92■□□□□ 0.46
ARPC1A-204ENST00000471960 ZNF541Q9H0D2 1346 aa17.92■□□□□ 0.46
ARPC1A-204ENST00000471960 WDR90Q96KV7 1748 aa17.92■□□□□ 0.46
ARPC1A-204ENST00000471960 TRIM28Q13263 835 aaKnown RBP17.91■□□□□ 0.46
ARPC1A-204ENST00000471960 MAP3K2Q9Y2U5 619 aa17.91■□□□□ 0.46
ARPC1A-204ENST00000471960 METTL22Q9BUU2 404 aaPredicted RBP17.9■□□□□ 0.46
ARPC1A-204ENST00000471960 PI4KAP2A4QPH2 592 aa17.89■□□□□ 0.45
ARPC1A-204ENST00000471960 VAMP4O75379 141 aa17.89■□□□□ 0.45
ARPC1A-204ENST00000471960 SLC4A2P04920 1241 aa17.89■□□□□ 0.45
ARPC1A-204ENST00000471960 IGKV5-2P06315 115 aa17.89■□□□□ 0.45
ARPC1A-204ENST00000471960 HSPA6P17066 643 aa17.89■□□□□ 0.45
ARPC1A-204ENST00000471960 IARSP41252 1262 aaKnown RBP17.89■□□□□ 0.45
ARPC1A-204ENST00000471960 PI4KAP1Q8N8J0 262 aa17.89■□□□□ 0.45
ARPC1A-204ENST00000471960 PSMD1Q99460 953 aa17.89■□□□□ 0.45
ARPC1A-204ENST00000471960 ATP6V0A2Q9Y487 856 aa17.89■□□□□ 0.45
ARPC1A-204ENST00000471960 IRS4O14654 1257 aaPredicted RBP17.88■□□□□ 0.45
ARPC1A-204ENST00000471960 RBM46Q8TBY0 533 aaKnown RBP17.88■□□□□ 0.45
ARPC1A-204ENST00000471960 ZNF521Q96K83 1311 aa17.88■□□□□ 0.45
ARPC1A-204ENST00000471960 VEGFAP15692 232 aaPredicted RBP17.87■□□□□ 0.45
ARPC1A-204ENST00000471960 GRAPQ13588 217 aa17.87■□□□□ 0.45
ARPC1A-204ENST00000471960 DPY19L2Q6NUT2 758 aa17.87■□□□□ 0.45
ARPC1A-204ENST00000471960 KSR2Q6VAB6 950 aa17.87■□□□□ 0.45
ARPC1A-204ENST00000471960 DDX46Q7L014 1031 aaKnown RBP17.87■□□□□ 0.45
ARPC1A-204ENST00000471960 C16orf71Q8IYS4 520 aaPredicted RBP17.87■□□□□ 0.45
ARPC1A-204ENST00000471960 GRAPLQ8TC17 118 aaPredicted RBP17.87■□□□□ 0.45
ARPC1A-204ENST00000471960 CELF1Q92879 486 aaKnown RBP17.87■□□□□ 0.45
ARPC1A-204ENST00000471960 STK31Q9BXU1 1019 aa17.87■□□□□ 0.45
ARPC1A-204ENST00000471960 POTEIP0CG38 1075 aa17.86■□□□□ 0.45
ARPC1A-204ENST00000471960 POTEJP0CG39 1038 aa17.86■□□□□ 0.45
ARPC1A-204ENST00000471960 SF3B3Q15393 1217 aaKnown RBP17.86■□□□□ 0.45
ARPC1A-204ENST00000471960 CWF19L2Q2TBE0 894 aaKnown RBP17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms