RNA–Protein interactions for RNA: ENST00000471939.5

SH2D3C-210, Transcript of SH2 domain containing 3C, humanhuman

TSL 5

Gene SH2D3C, Length 936 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3C-210ENST00000471939 EXOSC9Q06265 439 aaKnown RBP16.87■□□□□ 0.29
SH2D3C-210ENST00000471939 ERFEQ4G0M1 354 aa16.87■□□□□ 0.29
SH2D3C-210ENST00000471939 RIC3Q7Z5B4 369 aa16.87■□□□□ 0.29
SH2D3C-210ENST00000471939 NUTM1Q86Y26 1132 aa16.87■□□□□ 0.29
SH2D3C-210ENST00000471939 MIER1Q8N108 512 aa16.87■□□□□ 0.29
SH2D3C-210ENST00000471939 PHAXQ9H814 394 aaKnown RBP16.87■□□□□ 0.29
SH2D3C-210ENST00000471939 VAMP4O75379 141 aa16.86■□□□□ 0.29
SH2D3C-210ENST00000471939 TRIM28Q13263 835 aaKnown RBP16.86■□□□□ 0.29
SH2D3C-210ENST00000471939 ISCA1Q9BUE6 129 aa16.86■□□□□ 0.29
SH2D3C-210ENST00000471939 COL11A2P13942 1736 aaPredicted RBP16.86■□□□□ 0.29
SH2D3C-210ENST00000471939 ABCC12Q96J65 1359 aa16.86■□□□□ 0.29
SH2D3C-210ENST00000471939 E9PSI1 815 aa16.85■□□□□ 0.29
SH2D3C-210ENST00000471939 CRY2Q49AN0 593 aa16.85■□□□□ 0.29
SH2D3C-210ENST00000471939 SLC10A5Q5PT55 438 aa16.85■□□□□ 0.29
SH2D3C-210ENST00000471939 SLC4A2P04920 1241 aa16.84■□□□□ 0.29
SH2D3C-210ENST00000471939 ALDH1B1P30837 517 aa16.84■□□□□ 0.29
SH2D3C-210ENST00000471939 SOGA3Q5TF21 947 aa16.84■□□□□ 0.29
SH2D3C-210ENST00000471939 PRPF40BQ6NWY9 871 aaKnown RBP16.83■□□□□ 0.28
SH2D3C-210ENST00000471939 SH3TC1Q8TE82 1336 aa16.83■□□□□ 0.28
SH2D3C-210ENST00000471939 NLRP3Q96P20 1036 aa16.83■□□□□ 0.28
SH2D3C-210ENST00000471939 TRMT112Q9UI30 125 aaKnown RBP16.83■□□□□ 0.28
SH2D3C-210ENST00000471939 CACNA1FO60840 1977 aa16.82■□□□□ 0.28
SH2D3C-210ENST00000471939 ARFGEF2Q9Y6D5 1785 aa16.82■□□□□ 0.28
SH2D3C-210ENST00000471939 ADCY9O60503 1353 aa16.82■□□□□ 0.28
SH2D3C-210ENST00000471939 KSR2Q6VAB6 950 aa16.82■□□□□ 0.28
SH2D3C-210ENST00000471939 METTL22Q9BUU2 404 aaPredicted RBP16.82■□□□□ 0.28
SH2D3C-210ENST00000471939 ATP5J2-PTCD1G3V325 749 aa16.81■□□□□ 0.28
SH2D3C-210ENST00000471939 TCERG1O14776 1098 aaKnown RBP16.81■□□□□ 0.28
SH2D3C-210ENST00000471939 C21orf2O43822 256 aa16.81■□□□□ 0.28
SH2D3C-210ENST00000471939 HOXA10P31260 410 aaPredicted RBP16.81■□□□□ 0.28
SH2D3C-210ENST00000471939 SLFN5Q08AF3 891 aa16.81■□□□□ 0.28
SH2D3C-210ENST00000471939 CCDC191Q8NCU4 936 aa16.81■□□□□ 0.28
SH2D3C-210ENST00000471939 RPGRQ92834 1020 aaKnown RBP16.81■□□□□ 0.28
SH2D3C-210ENST00000471939 TNRC6CQ9HCJ0 1690 aaKnown RBP16.81■□□□□ 0.28
SH2D3C-210ENST00000471939 PI4KAP2A4QPH2 592 aa16.8■□□□□ 0.28
SH2D3C-210ENST00000471939 FLIIQ13045 1269 aa16.8■□□□□ 0.28
SH2D3C-210ENST00000471939 PI4KAP1Q8N8J0 262 aa16.8■□□□□ 0.28
SH2D3C-210ENST00000471939 RBM17Q96I25 401 aaKnown RBP16.8■□□□□ 0.28
SH2D3C-210ENST00000471939 CRAMP1Q96RY5 1269 aa16.8■□□□□ 0.28
SH2D3C-210ENST00000471939 MYD88Q99836 296 aa16.8■□□□□ 0.28
SH2D3C-210ENST00000471939 MAP3K2Q9Y2U5 619 aa16.8■□□□□ 0.28
SH2D3C-210ENST00000471939 SLX4Q8IY92 1834 aa16.8■□□□□ 0.28
SH2D3C-210ENST00000471939 HSP90B1P14625 803 aaKnown RBP16.79■□□□□ 0.28
SH2D3C-210ENST00000471939 NEXNQ0ZGT2 675 aa16.79■□□□□ 0.28
SH2D3C-210ENST00000471939 C9orf131Q5VYM1 1079 aa16.79■□□□□ 0.28
SH2D3C-210ENST00000471939 G2E3Q7L622 706 aa16.79■□□□□ 0.28
SH2D3C-210ENST00000471939 C7orf43Q8WVR3 580 aa16.79■□□□□ 0.28
SH2D3C-210ENST00000471939 LTBP3Q9NS15 1303 aa16.78■□□□□ 0.28
SH2D3C-210ENST00000471939 HCLS1P14317 486 aaPredicted RBP16.78■□□□□ 0.28
SH2D3C-210ENST00000471939 LMNB1P20700 586 aa16.78■□□□□ 0.28
SH2D3C-210ENST00000471939 APLP1P51693 650 aa16.78■□□□□ 0.28
SH2D3C-210ENST00000471939 CCDC93Q567U6 631 aa16.78■□□□□ 0.28
SH2D3C-210ENST00000471939 ZBTB38Q8NAP3 1195 aaPredicted RBP16.78■□□□□ 0.28
SH2D3C-210ENST00000471939 CWC25Q9NXE8 425 aaPredicted RBP16.78■□□□□ 0.28
SH2D3C-210ENST00000471939 NFKBIEO00221 500 aa16.77■□□□□ 0.28
SH2D3C-210ENST00000471939 RASSF7Q02833 373 aa16.77■□□□□ 0.28
SH2D3C-210ENST00000471939 FKBP5Q13451 457 aaPredicted RBP16.77■□□□□ 0.28
SH2D3C-210ENST00000471939 CC2D2BQ6DHV5 1058 aa16.77■□□□□ 0.28
SH2D3C-210ENST00000471939 C3orf67Q6ZVT6 689 aa16.77■□□□□ 0.28
SH2D3C-210ENST00000471939 C16orf71Q8IYS4 520 aaPredicted RBP16.77■□□□□ 0.28
SH2D3C-210ENST00000471939 SYNE4Q8N205 404 aa16.77■□□□□ 0.28
SH2D3C-210ENST00000471939 ZNF428Q96B54 188 aa16.77■□□□□ 0.28
SH2D3C-210ENST00000471939 FAM89AQ96GI7 184 aa16.77■□□□□ 0.28
SH2D3C-210ENST00000471939 RNF181Q9P0P0 153 aa16.77■□□□□ 0.28
SH2D3C-210ENST00000471939 ZNF219Q9P2Y4 722 aaPredicted RBP16.77■□□□□ 0.28
SH2D3C-210ENST00000471939 ZC3H4Q9UPT8 1303 aaKnown RBP16.76■□□□□ 0.27
SH2D3C-210ENST00000471939 CACNA1SQ13698 1873 aa16.76■□□□□ 0.27
SH2D3C-210ENST00000471939 KIF3CO14782 793 aa16.76■□□□□ 0.27
SH2D3C-210ENST00000471939 PCCAP05165 728 aaPredicted RBP16.76■□□□□ 0.27
SH2D3C-210ENST00000471939 GRIPAP1Q4V328 841 aa16.76■□□□□ 0.27
SH2D3C-210ENST00000471939 TRMT2AQ8IZ69 625 aaKnown RBP16.76■□□□□ 0.27
SH2D3C-210ENST00000471939 RTKN2Q8IZC4 609 aa16.76■□□□□ 0.27
SH2D3C-210ENST00000471939 TAOK3Q9H2K8 898 aa16.76■□□□□ 0.27
SH2D3C-210ENST00000471939 IRS4O14654 1257 aaPredicted RBP16.75■□□□□ 0.27
SH2D3C-210ENST00000471939 TOMM70O94826 608 aa16.75■□□□□ 0.27
SH2D3C-210ENST00000471939 DDX46Q7L014 1031 aaKnown RBP16.75■□□□□ 0.27
SH2D3C-210ENST00000471939 DNAAF4Q8WXU2 420 aa16.75■□□□□ 0.27
SH2D3C-210ENST00000471939 SBF1O95248 1867 aa16.75■□□□□ 0.27
SH2D3C-210ENST00000471939 FER1L6Q2WGJ9 1857 aa16.75■□□□□ 0.27
SH2D3C-210ENST00000471939 IGKV5-2P06315 115 aa16.74■□□□□ 0.27
SH2D3C-210ENST00000471939 CT47B1P0C2W7 299 aaPredicted RBP16.74■□□□□ 0.27
SH2D3C-210ENST00000471939 SF3B3Q15393 1217 aaKnown RBP16.74■□□□□ 0.27
SH2D3C-210ENST00000471939 CDCA7LQ96GN5 454 aa16.74■□□□□ 0.27
SH2D3C-210ENST00000471939 NEURL1BA8MQ27 555 aa16.73■□□□□ 0.27
SH2D3C-210ENST00000471939 PPEF1O14829 653 aaPredicted RBP16.73■□□□□ 0.27
SH2D3C-210ENST00000471939 BBOX1O75936 387 aa16.73■□□□□ 0.27
SH2D3C-210ENST00000471939 FKBP4Q02790 459 aaKnown RBP eCLIP16.73■□□□□ 0.27
SH2D3C-210ENST00000471939 TMX4Q9H1E5 349 aaPredicted RBP16.73■□□□□ 0.27
SH2D3C-210ENST00000471939 ABCC4O15439 1325 aa16.72■□□□□ 0.27
SH2D3C-210ENST00000471939 CDHR2Q9BYE9 1310 aa16.72■□□□□ 0.27
SH2D3C-210ENST00000471939 GRAPQ13588 217 aa16.72■□□□□ 0.27
SH2D3C-210ENST00000471939 RTL5Q5HYW3 569 aaPredicted RBP16.72■□□□□ 0.27
SH2D3C-210ENST00000471939 TMC4Q7Z404 712 aa16.72■□□□□ 0.27
SH2D3C-210ENST00000471939 LINS1Q8NG48 757 aa16.72■□□□□ 0.27
SH2D3C-210ENST00000471939 GRAPLQ8TC17 118 aaPredicted RBP16.72■□□□□ 0.27
SH2D3C-210ENST00000471939 DDX60Q8IY21 1712 aaKnown RBP16.72■□□□□ 0.27
SH2D3C-210ENST00000471939 LAMB2P55268 1798 aa16.72■□□□□ 0.27
SH2D3C-210ENST00000471939 PDE8AO60658 829 aa16.71■□□□□ 0.27
SH2D3C-210ENST00000471939 PRELPP51888 382 aa16.71■□□□□ 0.27
SH2D3C-210ENST00000471939 ALDH1L2Q3SY69 923 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms