RNA–Protein interactions for RNA: ENST00000471862.1

COL4A3-205, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 5

Gene COL4A3, Length 755 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-205ENST00000471862 PPP1R42Q7Z4L9 355 aa15.01□□□□□ -0.01
COL4A3-205ENST00000471862 RRAGCQ9HB90 399 aa15.01□□□□□ -0.01
COL4A3-205ENST00000471862 RNF123Q5XPI4 1314 aa15□□□□□ -0.01
COL4A3-205ENST00000471862 ALDH1B1P30837 517 aa15□□□□□ -0.01
COL4A3-205ENST00000471862 AIMP1Q12904 312 aaKnown RBP15□□□□□ -0.01
COL4A3-205ENST00000471862 HSP90AB3PQ58FF7 597 aa15□□□□□ -0.01
COL4A3-205ENST00000471862 DUSP27Q5VZP5 1158 aa15□□□□□ -0.01
COL4A3-205ENST00000471862 OLFM4Q6UX06 510 aa15□□□□□ -0.01
COL4A3-205ENST00000471862 RBM46Q8TBY0 533 aaKnown RBP15□□□□□ -0.01
COL4A3-205ENST00000471862 GNAI1P63096 354 aa14.99□□□□□ -0.01
COL4A3-205ENST00000471862 FKBP4Q02790 459 aaKnown RBP eCLIP14.99□□□□□ -0.01
COL4A3-205ENST00000471862 CALD1Q05682 793 aaKnown RBP14.99□□□□□ -0.01
COL4A3-205ENST00000471862 TCIRG1Q13488 830 aa14.99□□□□□ -0.01
COL4A3-205ENST00000471862 SLC10A5Q5PT55 438 aa14.99□□□□□ -0.01
COL4A3-205ENST00000471862 C3orf67Q6ZVT6 689 aa14.99□□□□□ -0.01
COL4A3-205ENST00000471862 NLRP10Q86W26 655 aa14.99□□□□□ -0.01
COL4A3-205ENST00000471862 DBF4Q9UBU7 674 aaPredicted RBP14.99□□□□□ -0.01
COL4A3-205ENST00000471862 POTECB2RU33 542 aa14.98□□□□□ -0.01
COL4A3-205ENST00000471862 UTP14AQ9BVJ6 771 aaKnown RBP14.98□□□□□ -0.01
COL4A3-205ENST00000471862 CCDC27Q2M243 656 aa14.97□□□□□ -0.01
COL4A3-205ENST00000471862 C16orf71Q8IYS4 520 aaPredicted RBP14.97□□□□□ -0.01
COL4A3-205ENST00000471862 RTKN2Q8IZC4 609 aa14.97□□□□□ -0.01
COL4A3-205ENST00000471862 PLBD2Q8NHP8 589 aa14.97□□□□□ -0.01
COL4A3-205ENST00000471862 CRAMP1Q96RY5 1269 aa14.97□□□□□ -0.01
COL4A3-205ENST00000471862 DDX60Q8IY21 1712 aaKnown RBP14.97□□□□□ -0.01
COL4A3-205ENST00000471862 VEGFAP15692 232 aaPredicted RBP14.96□□□□□ -0.01
COL4A3-205ENST00000471862 FSTL1Q12841 308 aa14.96□□□□□ -0.01
COL4A3-205ENST00000471862 NCBP3Q53F19 620 aaKnown RBP14.96□□□□□ -0.01
COL4A3-205ENST00000471862 RPGRQ92834 1020 aaKnown RBP14.96□□□□□ -0.01
COL4A3-205ENST00000471862 NLRP3Q96P20 1036 aa14.96□□□□□ -0.01
COL4A3-205ENST00000471862 ISCA1Q9BUE6 129 aa14.96□□□□□ -0.01
COL4A3-205ENST00000471862 HYPKQ9NX55 129 aa14.96□□□□□ -0.01
COL4A3-205ENST00000471862 ANP32CO43423 234 aa14.95□□□□□ -0.02
COL4A3-205ENST00000471862 CC2D2BQ6DHV5 1058 aa14.95□□□□□ -0.02
COL4A3-205ENST00000471862 DPY19L2Q6NUT2 758 aa14.95□□□□□ -0.02
COL4A3-205ENST00000471862 ANKRD13DQ6ZTN6 518 aa14.95□□□□□ -0.02
COL4A3-205ENST00000471862 SLC51AQ86UW1 340 aa14.95□□□□□ -0.02
COL4A3-205ENST00000471862 C8orf58Q8NAV2 365 aa14.95□□□□□ -0.02
COL4A3-205ENST00000471862 RBM17Q96I25 401 aaKnown RBP14.95□□□□□ -0.02
COL4A3-205ENST00000471862 PSMD1Q99460 953 aa14.95□□□□□ -0.02
COL4A3-205ENST00000471862 MRS2Q9HD23 443 aa14.95□□□□□ -0.02
COL4A3-205ENST00000471862 ZNF277Q9NRM2 450 aaPredicted RBP14.95□□□□□ -0.02
COL4A3-205ENST00000471862 WWC1Q8IX03 1113 aa14.94□□□□□ -0.02
COL4A3-205ENST00000471862 SYNE4Q8N205 404 aa14.94□□□□□ -0.02
COL4A3-205ENST00000471862 COL4A5P29400 1685 aa14.93□□□□□ -0.02
COL4A3-205ENST00000471862 SH3TC1Q8TE82 1336 aa14.93□□□□□ -0.02
COL4A3-205ENST00000471862 ELL2O00472 640 aaPredicted RBP14.93□□□□□ -0.02
COL4A3-205ENST00000471862 DDNO94850 711 aaPredicted RBP14.93□□□□□ -0.02
COL4A3-205ENST00000471862 IARSP41252 1262 aaKnown RBP14.93□□□□□ -0.02
COL4A3-205ENST00000471862 APLP1P51693 650 aa14.93□□□□□ -0.02
COL4A3-205ENST00000471862 PHAXQ9H814 394 aaKnown RBP14.93□□□□□ -0.02
COL4A3-205ENST00000471862 TRMT112Q9UI30 125 aaKnown RBP14.93□□□□□ -0.02
COL4A3-205ENST00000471862 SCN4AP35499 1836 aa14.93□□□□□ -0.02
COL4A3-205ENST00000471862 TAF1P21675 1872 aa14.93□□□□□ -0.02
COL4A3-205ENST00000471862 ABCC4O15439 1325 aa14.92□□□□□ -0.02
COL4A3-205ENST00000471862 PPEF1O14829 653 aaPredicted RBP14.92□□□□□ -0.02
COL4A3-205ENST00000471862 HCLS1P14317 486 aaPredicted RBP14.92□□□□□ -0.02
COL4A3-205ENST00000471862 TRIM28Q13263 835 aaKnown RBP14.92□□□□□ -0.02
COL4A3-205ENST00000471862 GRIPAP1Q4V328 841 aa14.92□□□□□ -0.02
COL4A3-205ENST00000471862 TSPYL6Q8N831 410 aa14.92□□□□□ -0.02
COL4A3-205ENST00000471862 SMC1BQ8NDV3 1235 aa14.92□□□□□ -0.02
COL4A3-205ENST00000471862 L3MBTL3Q96JM7 780 aaPredicted RBP14.92□□□□□ -0.02
COL4A3-205ENST00000471862 IL16Q14005 1332 aa14.92□□□□□ -0.02
COL4A3-205ENST00000471862 ZNF541Q9H0D2 1346 aa14.92□□□□□ -0.02
COL4A3-205ENST00000471862 FZD9O00144 591 aa14.91□□□□□ -0.02
COL4A3-205ENST00000471862 TSR2Q969E8 191 aaKnown RBP14.91□□□□□ -0.02
COL4A3-205ENST00000471862 LRRC37AA6NMS7 1700 aa14.91□□□□□ -0.02
COL4A3-205ENST00000471862 ATP5J2-PTCD1G3V325 749 aa14.9□□□□□ -0.02
COL4A3-205ENST00000471862 CCDC30Q5VVM6 783 aa14.9□□□□□ -0.02
COL4A3-205ENST00000471862 ATP6V0A2Q9Y487 856 aa14.9□□□□□ -0.02
COL4A3-205ENST00000471862 GOLGA2Q08379 1002 aa14.89□□□□□ -0.03
COL4A3-205ENST00000471862 DNAJC5GQ8N7S2 189 aa14.89□□□□□ -0.03
COL4A3-205ENST00000471862 FAM89AQ96GI7 184 aa14.89□□□□□ -0.03
COL4A3-205ENST00000471862 CHMP4AQ9BY43 222 aa14.89□□□□□ -0.03
COL4A3-205ENST00000471862 COL4A1P02462 1669 aa14.89□□□□□ -0.03
COL4A3-205ENST00000471862 CACNA1FO60840 1977 aa14.88□□□□□ -0.03
COL4A3-205ENST00000471862 TCERG1O14776 1098 aaKnown RBP14.88□□□□□ -0.03
COL4A3-205ENST00000471862 BBOX1O75936 387 aa14.88□□□□□ -0.03
COL4A3-205ENST00000471862 GRAPQ13588 217 aa14.88□□□□□ -0.03
COL4A3-205ENST00000471862 SF3B3Q15393 1217 aaKnown RBP14.88□□□□□ -0.03
COL4A3-205ENST00000471862 RIC3Q7Z5B4 369 aa14.88□□□□□ -0.03
COL4A3-205ENST00000471862 GRAPLQ8TC17 118 aaPredicted RBP14.88□□□□□ -0.03
COL4A3-205ENST00000471862 ZNF428Q96B54 188 aa14.88□□□□□ -0.03
COL4A3-205ENST00000471862 RTFDC1Q9BY42 306 aaPredicted RBP14.88□□□□□ -0.03
COL4A3-205ENST00000471862 ADAMTSL1Q8N6G6 1762 aa14.88□□□□□ -0.03
COL4A3-205ENST00000471862 DUOX1Q9NRD9 1551 aa14.87□□□□□ -0.03
COL4A3-205ENST00000471862 DDX46Q7L014 1031 aaKnown RBP14.87□□□□□ -0.03
COL4A3-205ENST00000471862 SP8Q8IXZ3 490 aa14.87□□□□□ -0.03
COL4A3-205ENST00000471862 IQCA1LA6NCM1 817 aa14.86□□□□□ -0.03
COL4A3-205ENST00000471862 POTEIP0CG38 1075 aa14.86□□□□□ -0.03
COL4A3-205ENST00000471862 POTEJP0CG39 1038 aa14.86□□□□□ -0.03
COL4A3-205ENST00000471862 HTRA3P83110 453 aa14.86□□□□□ -0.03
COL4A3-205ENST00000471862 TWISTNBQ3B726 338 aaPredicted RBP14.86□□□□□ -0.03
COL4A3-205ENST00000471862 WDR63Q8IWG1 891 aa14.86□□□□□ -0.03
COL4A3-205ENST00000471862 ZBTB38Q8NAP3 1195 aaPredicted RBP14.86□□□□□ -0.03
COL4A3-205ENST00000471862 CCDC191Q8NCU4 936 aa14.86□□□□□ -0.03
COL4A3-205ENST00000471862 JDP2Q8WYK2 163 aa14.86□□□□□ -0.03
COL4A3-205ENST00000471862 MYD88Q99836 296 aa14.86□□□□□ -0.03
COL4A3-205ENST00000471862 METTL22Q9BUU2 404 aaPredicted RBP14.86□□□□□ -0.03
COL4A3-205ENST00000471862 VPS33BQ9H267 617 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms