RNA–Protein interactions for RNA: ENST00000471572.6

NF1-208, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 2,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-208ENST00000471572 GPR152Q8TDT2 470 aa8.38□□□□□ -1.07
NF1-208ENST00000471572 SPON2Q9BUD6 331 aa8.38□□□□□ -1.07
NF1-208ENST00000471572 CDV3Q9UKY7 258 aaKnown RBP8.38□□□□□ -1.07
NF1-208ENST00000471572 LILRB2Q8N423 598 aa8.37□□□□□ -1.07
NF1-208ENST00000471572 MRPL50Q8N5N7 158 aaKnown RBP8.37□□□□□ -1.07
NF1-208ENST00000471572 JDP2Q8WYK2 163 aa8.37□□□□□ -1.07
NF1-208ENST00000471572 EFR3BQ9Y2G0 817 aa8.37□□□□□ -1.07
NF1-208ENST00000471572 CCDC85CA6NKD9 419 aa8.37□□□□□ -1.07
NF1-208ENST00000471572 F6X3S4 739 aa8.37□□□□□ -1.07
NF1-208ENST00000471572 EML1O00423 815 aa8.37□□□□□ -1.07
NF1-208ENST00000471572 CPNE3O75131 537 aaKnown RBP8.37□□□□□ -1.07
NF1-208ENST00000471572 BCAMP50895 628 aa8.37□□□□□ -1.07
NF1-208ENST00000471572 TBX4P57082 545 aa8.37□□□□□ -1.07
NF1-208ENST00000471572 COPS2P61201 443 aa8.37□□□□□ -1.07
NF1-208ENST00000471572 C8orf34Q49A92 452 aa8.37□□□□□ -1.07
NF1-208ENST00000471572 TRIM55Q9BYV6 548 aa8.37□□□□□ -1.07
NF1-208ENST00000471572 TMPRSS4Q9NRS4 437 aa8.37□□□□□ -1.07
NF1-208ENST00000471572 SMTNP53814 917 aa8.36□□□□□ -1.07
NF1-208ENST00000471572 CCDC146Q8IYE0 955 aa8.36□□□□□ -1.07
NF1-208ENST00000471572 SP7Q8TDD2 431 aaPredicted RBP8.36□□□□□ -1.07
NF1-208ENST00000471572 CCDC74AQ96AQ1 378 aa8.36□□□□□ -1.07
NF1-208ENST00000471572 IER2Q9BTL4 223 aa8.36□□□□□ -1.07
NF1-208ENST00000471572 GINM1Q9NU53 330 aa8.36□□□□□ -1.07
NF1-208ENST00000471572 FAM8A1Q9UBU6 413 aa8.36□□□□□ -1.07
NF1-208ENST00000471572 ESYT3A0FGR9 886 aa8.36□□□□□ -1.07
NF1-208ENST00000471572 SH3BP2P78314 561 aa8.36□□□□□ -1.07
NF1-208ENST00000471572 KIAA0907Q7Z7F0 614 aaPredicted RBP8.36□□□□□ -1.07
NF1-208ENST00000471572 KIAA0825Q8IV33 1275 aa8.36□□□□□ -1.07
NF1-208ENST00000471572 RAB6BQ9NRW1 208 aa8.36□□□□□ -1.07
NF1-208ENST00000471572 IRX6P78412 446 aaPredicted RBP8.35□□□□□ -1.07
NF1-208ENST00000471572 C11orf91Q3C1V1 193 aa8.35□□□□□ -1.07
NF1-208ENST00000471572 ALDH16A1Q8IZ83 802 aa8.35□□□□□ -1.07
NF1-208ENST00000471572 ZDHHC1Q8WTX9 485 aa8.35□□□□□ -1.07
NF1-208ENST00000471572 IFT43Q96FT9 208 aa8.35□□□□□ -1.07
NF1-208ENST00000471572 FOXD3Q9UJU5 478 aaPredicted RBP8.35□□□□□ -1.07
NF1-208ENST00000471572 TTF2Q9UNY4 1162 aaKnown RBP8.35□□□□□ -1.07
NF1-208ENST00000471572 SOWAHBA6NEL2 793 aa8.34□□□□□ -1.07
NF1-208ENST00000471572 PPP1R12AO14974 1030 aaPredicted RBP8.34□□□□□ -1.07
NF1-208ENST00000471572 GYS2P54840 703 aa8.34□□□□□ -1.07
NF1-208ENST00000471572 CHMP4BP1P59074 171 aa8.34□□□□□ -1.07
NF1-208ENST00000471572 EAF1Q96JC9 268 aaPredicted RBP8.34□□□□□ -1.07
NF1-208ENST00000471572 THRAP3Q9Y2W1 955 aaKnown RBP8.34□□□□□ -1.07
NF1-208ENST00000471572 POTEB2H3BUK9 544 aa8.34□□□□□ -1.07
NF1-208ENST00000471572 VARS2Q5ST30 1063 aaKnown RBP8.34□□□□□ -1.07
NF1-208ENST00000471572 NXPE4Q6UWF7 544 aa8.34□□□□□ -1.07
NF1-208ENST00000471572 SMC5Q8IY18 1101 aa8.34□□□□□ -1.07
NF1-208ENST00000471572 ESF1Q9H501 851 aaKnown RBP8.34□□□□□ -1.07
NF1-208ENST00000471572 SOX9P48436 509 aa8.33□□□□□ -1.08
NF1-208ENST00000471572 ODR4Q5SWX8 454 aa8.33□□□□□ -1.08
NF1-208ENST00000471572 TREML1Q86YW5 311 aa8.33□□□□□ -1.08
NF1-208ENST00000471572 DNAJC7Q99615 494 aa8.33□□□□□ -1.08
NF1-208ENST00000471572 GIPC1O14908 333 aa8.32□□□□□ -1.08
NF1-208ENST00000471572 ADH1BP00325 375 aa8.32□□□□□ -1.08
NF1-208ENST00000471572 HIRAP54198 1017 aaPredicted RBP8.32□□□□□ -1.08
NF1-208ENST00000471572 RTN1Q16799 776 aa8.32□□□□□ -1.08
NF1-208ENST00000471572 ZNF295-AS1Q8N0V1 137 aa8.32□□□□□ -1.08
NF1-208ENST00000471572 ZNF784Q8NCA9 323 aaPredicted RBP8.32□□□□□ -1.08
NF1-208ENST00000471572 EVI5LQ96CN4 794 aa8.32□□□□□ -1.08
NF1-208ENST00000471572 TRIM56Q9BRZ2 755 aaKnown RBP8.32□□□□□ -1.08
NF1-208ENST00000471572 TYW1Q9NV66 732 aaKnown RBP8.32□□□□□ -1.08
NF1-208ENST00000471572 TSR3Q9UJK0 312 aaKnown RBP8.32□□□□□ -1.08
NF1-208ENST00000471572 HCN4Q9Y3Q4 1203 aa8.32□□□□□ -1.08
NF1-208ENST00000471572 TKFCQ3LXA3 575 aa8.32□□□□□ -1.08
NF1-208ENST00000471572 RAVER1Q8IY67 606 aaKnown RBP8.32□□□□□ -1.08
NF1-208ENST00000471572 CELF2-AS1Q8N7Q2 184 aa8.32□□□□□ -1.08
NF1-208ENST00000471572 APPBP2Q92624 585 aa8.32□□□□□ -1.08
NF1-208ENST00000471572 EMID1Q96A84 441 aaPredicted RBP8.32□□□□□ -1.08
NF1-208ENST00000471572 SGSM3Q96HU1 749 aa8.32□□□□□ -1.08
NF1-208ENST00000471572 SLKQ9H2G2 1235 aaPredicted RBP8.32□□□□□ -1.08
NF1-208ENST00000471572 BCS1LQ9Y276 419 aa8.32□□□□□ -1.08
NF1-208ENST00000471572 MSRB2Q9Y3D2 182 aa8.32□□□□□ -1.08
NF1-208ENST00000471572 LILRA1O75019 489 aa8.31□□□□□ -1.08
NF1-208ENST00000471572 TNFRSF21O75509 655 aa8.31□□□□□ -1.08
NF1-208ENST00000471572 MASP1P48740 699 aa8.31□□□□□ -1.08
NF1-208ENST00000471572 PGBD3Q8N328 593 aa8.31□□□□□ -1.08
NF1-208ENST00000471572 NPHS2Q9NP85 383 aa8.31□□□□□ -1.08
NF1-208ENST00000471572 WNT7BP56706 349 aa8.3□□□□□ -1.08
NF1-208ENST00000471572 MAP3K10Q02779 954 aa8.3□□□□□ -1.08
NF1-208ENST00000471572 SQSTM1Q13501 440 aa8.3□□□□□ -1.08
NF1-208ENST00000471572 VASH1Q7L8A9 365 aaPredicted RBP8.3□□□□□ -1.08
NF1-208ENST00000471572 LRP10Q7Z4F1 713 aa8.3□□□□□ -1.08
NF1-208ENST00000471572 CNTN3Q9P232 1028 aa8.3□□□□□ -1.08
NF1-208ENST00000471572 SERTM1A2A2V5 107 aa8.3□□□□□ -1.08
NF1-208ENST00000471572 GNRH1P01148 92 aa8.3□□□□□ -1.08
NF1-208ENST00000471572 IL2RAP01589 272 aa8.3□□□□□ -1.08
NF1-208ENST00000471572 HCLS1P14317 486 aaPredicted RBP8.3□□□□□ -1.08
NF1-208ENST00000471572 PCSK2P16519 638 aa8.3□□□□□ -1.08
NF1-208ENST00000471572 SPOCK3Q9BQ16 436 aa8.3□□□□□ -1.08
NF1-208ENST00000471572 BCO2Q9BYV7 579 aa8.3□□□□□ -1.08
NF1-208ENST00000471572 ARHGEF10LQ9HCE6 1279 aa8.3□□□□□ -1.08
NF1-208ENST00000471572 MAP4K5Q9Y4K4 846 aa8.3□□□□□ -1.08
NF1-208ENST00000471572 MINDY4BA8MYZ0 360 aa8.29□□□□□ -1.08
NF1-208ENST00000471572 ARSHQ5FYA8 562 aa8.29□□□□□ -1.08
NF1-208ENST00000471572 ANKK1Q8NFD2 765 aa8.29□□□□□ -1.08
NF1-208ENST00000471572 ANAPC16Q96DE5 110 aa8.29□□□□□ -1.08
NF1-208ENST00000471572 RSRP1Q9BUV0 290 aa8.29□□□□□ -1.08
NF1-208ENST00000471572 NOC4LQ9BVI4 516 aaKnown RBP8.29□□□□□ -1.08
NF1-208ENST00000471572 FAM126AQ9BYI3 521 aaPredicted RBP8.29□□□□□ -1.08
NF1-208ENST00000471572 TMEM260Q9NX78 707 aa8.29□□□□□ -1.08
NF1-208ENST00000471572 PRKAG3Q9UGI9 489 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms