RNA–Protein interactions for RNA: ENST00000471494.5

RNF220-208, Transcript of ring finger protein 220, humanhuman

TSL 5

Gene RNF220, Length 720 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-208ENST00000471494 CCDC93Q567U6 631 aa30.38■■■□□ 2.45
RNF220-208ENST00000471494 C7orf43Q8WVR3 580 aa30.37■■■□□ 2.45
RNF220-208ENST00000471494 RPGRQ92834 1020 aaKnown RBP30.37■■■□□ 2.45
RNF220-208ENST00000471494 TOMM70O94826 608 aa30.36■■■□□ 2.45
RNF220-208ENST00000471494 C16orf71Q8IYS4 520 aaPredicted RBP30.36■■■□□ 2.45
RNF220-208ENST00000471494 UTP14AQ9BVJ6 771 aaKnown RBP30.36■■■□□ 2.45
RNF220-208ENST00000471494 RNF123Q5XPI4 1314 aa30.34■■■□□ 2.45
RNF220-208ENST00000471494 HYPKQ9NX55 129 aa30.34■■■□□ 2.45
RNF220-208ENST00000471494 LAMB2P55268 1798 aa30.33■■■□□ 2.45
RNF220-208ENST00000471494 GLTPD2A6NH11 291 aa30.33■■■□□ 2.45
RNF220-208ENST00000471494 RRAGCQ9HB90 399 aa30.33■■■□□ 2.45
RNF220-208ENST00000471494 TCIRG1Q13488 830 aa30.32■■■□□ 2.44
RNF220-208ENST00000471494 NLRP10Q86W26 655 aa30.32■■■□□ 2.44
RNF220-208ENST00000471494 PLBD2Q8NHP8 589 aa30.32■■■□□ 2.44
RNF220-208ENST00000471494 ELL2O00472 640 aaPredicted RBP30.31■■■□□ 2.44
RNF220-208ENST00000471494 HSPA6P17066 643 aa30.31■■■□□ 2.44
RNF220-208ENST00000471494 HOXA10P31260 410 aaPredicted RBP30.31■■■□□ 2.44
RNF220-208ENST00000471494 CCDC27Q2M243 656 aa30.31■■■□□ 2.44
RNF220-208ENST00000471494 FKBP4Q02790 459 aaKnown RBP eCLIP30.3■■■□□ 2.44
RNF220-208ENST00000471494 OLFM4Q6UX06 510 aa30.3■■■□□ 2.44
RNF220-208ENST00000471494 ANKRD13DQ6ZTN6 518 aa30.3■■■□□ 2.44
RNF220-208ENST00000471494 RTKN2Q8IZC4 609 aa30.3■■■□□ 2.44
RNF220-208ENST00000471494 NLRP3Q96P20 1036 aa30.3■■■□□ 2.44
RNF220-208ENST00000471494 DPY19L2Q6NUT2 758 aa30.29■■■□□ 2.44
RNF220-208ENST00000471494 RBM17Q96I25 401 aaKnown RBP30.29■■■□□ 2.44
RNF220-208ENST00000471494 RBM46Q8TBY0 533 aaKnown RBP30.28■■■□□ 2.44
RNF220-208ENST00000471494 WDR90Q96KV7 1748 aa30.27■■■□□ 2.44
RNF220-208ENST00000471494 SLC10A5Q5PT55 438 aa30.27■■■□□ 2.44
RNF220-208ENST00000471494 C3orf67Q6ZVT6 689 aa30.27■■■□□ 2.44
RNF220-208ENST00000471494 WWC1Q8IX03 1113 aa30.27■■■□□ 2.44
RNF220-208ENST00000471494 C8orf58Q8NAV2 365 aa30.27■■■□□ 2.44
RNF220-208ENST00000471494 CRAMP1Q96RY5 1269 aa30.27■■■□□ 2.44
RNF220-208ENST00000471494 CHMP4AQ9BY43 222 aa30.27■■■□□ 2.44
RNF220-208ENST00000471494 TRMT112Q9UI30 125 aaKnown RBP30.27■■■□□ 2.44
RNF220-208ENST00000471494 SH3TC1Q8TE82 1336 aa30.26■■■□□ 2.44
RNF220-208ENST00000471494 CC2D2BQ6DHV5 1058 aa30.25■■■□□ 2.43
RNF220-208ENST00000471494 ZNF277Q9NRM2 450 aaPredicted RBP30.25■■■□□ 2.43
RNF220-208ENST00000471494 DDX60Q8IY21 1712 aaKnown RBP30.25■■■□□ 2.43
RNF220-208ENST00000471494 VEGFAP15692 232 aaPredicted RBP30.24■■■□□ 2.43
RNF220-208ENST00000471494 GOLGA2Q08379 1002 aa30.24■■■□□ 2.43
RNF220-208ENST00000471494 TSR2Q969E8 191 aaKnown RBP30.24■■■□□ 2.43
RNF220-208ENST00000471494 PPEF1O14829 653 aaPredicted RBP30.23■■■□□ 2.43
RNF220-208ENST00000471494 NCBP3Q53F19 620 aaKnown RBP30.23■■■□□ 2.43
RNF220-208ENST00000471494 SNED1Q8TER0 1413 aa30.22■■■□□ 2.43
RNF220-208ENST00000471494 HCLS1P14317 486 aaPredicted RBP30.22■■■□□ 2.43
RNF220-208ENST00000471494 CCDC30Q5VVM6 783 aa30.22■■■□□ 2.43
RNF220-208ENST00000471494 ISCA1Q9BUE6 129 aa30.22■■■□□ 2.43
RNF220-208ENST00000471494 IL16Q14005 1332 aa30.22■■■□□ 2.43
RNF220-208ENST00000471494 CEP350Q5VT06 3117 aa30.21■■■□□ 2.43
RNF220-208ENST00000471494 ATP5J2-PTCD1G3V325 749 aa30.21■■■□□ 2.43
RNF220-208ENST00000471494 RIC3Q7Z5B4 369 aa30.21■■■□□ 2.43
RNF220-208ENST00000471494 SYNE4Q8N205 404 aa30.21■■■□□ 2.43
RNF220-208ENST00000471494 PHAXQ9H814 394 aaKnown RBP30.21■■■□□ 2.43
RNF220-208ENST00000471494 GRIPAP1Q4V328 841 aa30.2■■■□□ 2.43
RNF220-208ENST00000471494 ZNF428Q96B54 188 aa30.2■■■□□ 2.43
RNF220-208ENST00000471494 PSMD1Q99460 953 aa30.2■■■□□ 2.43
RNF220-208ENST00000471494 TCERG1O14776 1098 aaKnown RBP30.19■■■□□ 2.42
RNF220-208ENST00000471494 IARSP41252 1262 aaKnown RBP30.19■■■□□ 2.42
RNF220-208ENST00000471494 FSTL1Q12841 308 aa30.19■■■□□ 2.42
RNF220-208ENST00000471494 TSPYL6Q8N831 410 aa30.19■■■□□ 2.42
RNF220-208ENST00000471494 TMX4Q9H1E5 349 aaPredicted RBP30.19■■■□□ 2.42
RNF220-208ENST00000471494 ABCC4O15439 1325 aa30.19■■■□□ 2.42
RNF220-208ENST00000471494 TAF1P21675 1872 aa30.18■■■□□ 2.42
RNF220-208ENST00000471494 SALL2Q9Y467 1007 aaPredicted RBP30.17■■■□□ 2.42
RNF220-208ENST00000471494 DDNO94850 711 aaPredicted RBP30.16■■■□□ 2.42
RNF220-208ENST00000471494 APLP1P51693 650 aa30.16■■■□□ 2.42
RNF220-208ENST00000471494 SMC1BQ8NDV3 1235 aa30.16■■■□□ 2.42
RNF220-208ENST00000471494 SCN4AP35499 1836 aa30.15■■■□□ 2.42
RNF220-208ENST00000471494 DDX58O95786 925 aaKnown RBP30.15■■■□□ 2.42
RNF220-208ENST00000471494 TRIM28Q13263 835 aaKnown RBP30.15■■■□□ 2.42
RNF220-208ENST00000471494 DDX46Q7L014 1031 aaKnown RBP30.15■■■□□ 2.42
RNF220-208ENST00000471494 FAM9BQ8IZU0 186 aa30.15■■■□□ 2.42
RNF220-208ENST00000471494 FAM89AQ96GI7 184 aa30.15■■■□□ 2.42
RNF220-208ENST00000471494 STK31Q9BXU1 1019 aa30.15■■■□□ 2.42
RNF220-208ENST00000471494 CACNA1FO60840 1977 aa30.14■■■□□ 2.42
RNF220-208ENST00000471494 TWISTNBQ3B726 338 aaPredicted RBP30.14■■■□□ 2.42
RNF220-208ENST00000471494 ATP6V0A2Q9Y487 856 aa30.14■■■□□ 2.42
RNF220-208ENST00000471494 POTECB2RU33 542 aa30.13■■■□□ 2.41
RNF220-208ENST00000471494 SLC51AQ86UW1 340 aa30.13■■■□□ 2.41
RNF220-208ENST00000471494 JDP2Q8WYK2 163 aa30.13■■■□□ 2.41
RNF220-208ENST00000471494 BBOX1O75936 387 aa30.12■■■□□ 2.41
RNF220-208ENST00000471494 RTL5Q5HYW3 569 aaPredicted RBP30.12■■■□□ 2.41
RNF220-208ENST00000471494 MYD88Q99836 296 aa30.12■■■□□ 2.41
RNF220-208ENST00000471494 ZNF541Q9H0D2 1346 aa30.12■■■□□ 2.41
RNF220-208ENST00000471494 FANCIQ9NVI1 1328 aa30.12■■■□□ 2.41
RNF220-208ENST00000471494 WDR63Q8IWG1 891 aa30.11■■■□□ 2.41
RNF220-208ENST00000471494 GRAPQ13588 217 aa30.1■■■□□ 2.41
RNF220-208ENST00000471494 GRAPLQ8TC17 118 aaPredicted RBP30.1■■■□□ 2.41
RNF220-208ENST00000471494 IQCA1LA6NCM1 817 aa30.09■■■□□ 2.41
RNF220-208ENST00000471494 LRRC37AA6NMS7 1700 aa30.09■■■□□ 2.41
RNF220-208ENST00000471494 COL4A5P29400 1685 aa30.09■■■□□ 2.41
RNF220-208ENST00000471494 LARGE2Q8N3Y3 721 aa30.09■■■□□ 2.41
RNF220-208ENST00000471494 L3MBTL3Q96JM7 780 aaPredicted RBP30.09■■■□□ 2.41
RNF220-208ENST00000471494 FZD9O00144 591 aa30.08■■■□□ 2.41
RNF220-208ENST00000471494 IRS4O14654 1257 aaPredicted RBP30.08■■■□□ 2.41
RNF220-208ENST00000471494 ZBTB38Q8NAP3 1195 aaPredicted RBP30.08■■■□□ 2.41
RNF220-208ENST00000471494 CCDC191Q8NCU4 936 aa30.08■■■□□ 2.41
RNF220-208ENST00000471494 METTL22Q9BUU2 404 aaPredicted RBP30.08■■■□□ 2.41
RNF220-208ENST00000471494 SP8Q8IXZ3 490 aa30.07■■■□□ 2.4
RNF220-208ENST00000471494 MAP3K2Q9Y2U5 619 aa30.07■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms