RNA–Protein interactions for RNA: ENST00000471459.1

HOXB3-206, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-206ENST00000471459 CRY2Q49AN0 593 aa19.27■□□□□ 0.68
HOXB3-206ENST00000471459 RRAGCQ9HB90 399 aa19.27■□□□□ 0.68
HOXB3-206ENST00000471459 GLTPD2A6NH11 291 aa19.26■□□□□ 0.67
HOXB3-206ENST00000471459 GRIPAP1Q4V328 841 aa19.26■□□□□ 0.67
HOXB3-206ENST00000471459 NCBP3Q53F19 620 aaKnown RBP19.26■□□□□ 0.67
HOXB3-206ENST00000471459 CCDC30Q5VVM6 783 aa19.26■□□□□ 0.67
HOXB3-206ENST00000471459 CC2D2BQ6DHV5 1058 aa19.26■□□□□ 0.67
HOXB3-206ENST00000471459 C7orf43Q8WVR3 580 aa19.26■□□□□ 0.67
HOXB3-206ENST00000471459 TRMT112Q9UI30 125 aaKnown RBP19.26■□□□□ 0.67
HOXB3-206ENST00000471459 ANKRD31Q8N7Z5 1873 aa19.25■□□□□ 0.67
HOXB3-206ENST00000471459 DLEC1Q9Y238 1755 aa19.25■□□□□ 0.67
HOXB3-206ENST00000471459 HOXA10P31260 410 aaPredicted RBP19.25■□□□□ 0.67
HOXB3-206ENST00000471459 GOLGA2Q08379 1002 aa19.25■□□□□ 0.67
HOXB3-206ENST00000471459 SLC10A5Q5PT55 438 aa19.25■□□□□ 0.67
HOXB3-206ENST00000471459 NLRP10Q86W26 655 aa19.25■□□□□ 0.67
HOXB3-206ENST00000471459 CRAMP1Q96RY5 1269 aa19.25■□□□□ 0.67
HOXB3-206ENST00000471459 VEGFAP15692 232 aaPredicted RBP19.24■□□□□ 0.67
HOXB3-206ENST00000471459 FKBP4Q02790 459 aaKnown RBP eCLIP19.24■□□□□ 0.67
HOXB3-206ENST00000471459 RIC3Q7Z5B4 369 aa19.24■□□□□ 0.67
HOXB3-206ENST00000471459 WWC1Q8IX03 1113 aa19.24■□□□□ 0.67
HOXB3-206ENST00000471459 ABCC12Q96J65 1359 aa19.23■□□□□ 0.67
HOXB3-206ENST00000471459 PRELPP51888 382 aa19.23■□□□□ 0.67
HOXB3-206ENST00000471459 SH3TC1Q8TE82 1336 aa19.23■□□□□ 0.67
HOXB3-206ENST00000471459 DDX58O95786 925 aaKnown RBP19.22■□□□□ 0.67
HOXB3-206ENST00000471459 HSPA6P17066 643 aa19.22■□□□□ 0.67
HOXB3-206ENST00000471459 C8orf58Q8NAV2 365 aa19.22■□□□□ 0.67
HOXB3-206ENST00000471459 RBM46Q8TBY0 533 aaKnown RBP19.22■□□□□ 0.67
HOXB3-206ENST00000471459 STK31Q9BXU1 1019 aa19.22■□□□□ 0.67
HOXB3-206ENST00000471459 RIC1Q4ADV7 1423 aa19.22■□□□□ 0.67
HOXB3-206ENST00000471459 IL16Q14005 1332 aa19.22■□□□□ 0.67
HOXB3-206ENST00000471459 HSP90B1P14625 803 aaKnown RBP19.21■□□□□ 0.67
HOXB3-206ENST00000471459 FAM9BQ8IZU0 186 aa19.21■□□□□ 0.67
HOXB3-206ENST00000471459 NUP98P52948 1817 aa19.21■□□□□ 0.67
HOXB3-206ENST00000471459 DDX46Q7L014 1031 aaKnown RBP19.2■□□□□ 0.66
HOXB3-206ENST00000471459 SYNE4Q8N205 404 aa19.2■□□□□ 0.66
HOXB3-206ENST00000471459 SALL2Q9Y467 1007 aaPredicted RBP19.2■□□□□ 0.66
HOXB3-206ENST00000471459 PPEF1O14829 653 aaPredicted RBP19.19■□□□□ 0.66
HOXB3-206ENST00000471459 BBOX1O75936 387 aa19.19■□□□□ 0.66
HOXB3-206ENST00000471459 HCLS1P14317 486 aaPredicted RBP19.19■□□□□ 0.66
HOXB3-206ENST00000471459 FSTL1Q12841 308 aa19.19■□□□□ 0.66
HOXB3-206ENST00000471459 WDR63Q8IWG1 891 aa19.19■□□□□ 0.66
HOXB3-206ENST00000471459 JDP2Q8WYK2 163 aa19.19■□□□□ 0.66
HOXB3-206ENST00000471459 TSR2Q969E8 191 aaKnown RBP19.19■□□□□ 0.66
HOXB3-206ENST00000471459 PSMD1Q99460 953 aa19.19■□□□□ 0.66
HOXB3-206ENST00000471459 ZNF277Q9NRM2 450 aaPredicted RBP19.19■□□□□ 0.66
HOXB3-206ENST00000471459 COL11A2P13942 1736 aaPredicted RBP19.19■□□□□ 0.66
HOXB3-206ENST00000471459 SLX4Q8IY92 1834 aa19.18■□□□□ 0.66
HOXB3-206ENST00000471459 ATP5J2-PTCD1G3V325 749 aa19.18■□□□□ 0.66
HOXB3-206ENST00000471459 TCERG1O14776 1098 aaKnown RBP19.18■□□□□ 0.66
HOXB3-206ENST00000471459 TRIM28Q13263 835 aaKnown RBP19.18■□□□□ 0.66
HOXB3-206ENST00000471459 ISCA1Q9BUE6 129 aa19.18■□□□□ 0.66
HOXB3-206ENST00000471459 PHAXQ9H814 394 aaKnown RBP19.18■□□□□ 0.66
HOXB3-206ENST00000471459 IARSP41252 1262 aaKnown RBP19.17■□□□□ 0.66
HOXB3-206ENST00000471459 OLFM4Q6UX06 510 aa19.17■□□□□ 0.66
HOXB3-206ENST00000471459 SMC1BQ8NDV3 1235 aa19.17■□□□□ 0.66
HOXB3-206ENST00000471459 SBF1O95248 1867 aa19.17■□□□□ 0.66
HOXB3-206ENST00000471459 APLP1P51693 650 aa19.16■□□□□ 0.66
HOXB3-206ENST00000471459 TWISTNBQ3B726 338 aaPredicted RBP19.16■□□□□ 0.66
HOXB3-206ENST00000471459 FAM89AQ96GI7 184 aa19.16■□□□□ 0.66
HOXB3-206ENST00000471459 C3orf67Q6ZVT6 689 aa19.15■□□□□ 0.66
HOXB3-206ENST00000471459 TMC4Q7Z404 712 aa19.15■□□□□ 0.66
HOXB3-206ENST00000471459 TSPYL6Q8N831 410 aa19.15■□□□□ 0.66
HOXB3-206ENST00000471459 SUPT20HQ8NEM7 779 aa19.15■□□□□ 0.66
HOXB3-206ENST00000471459 ATP6V0A2Q9Y487 856 aa19.15■□□□□ 0.66
HOXB3-206ENST00000471459 IQCA1LA6NCM1 817 aa19.14■□□□□ 0.65
HOXB3-206ENST00000471459 DDNO94850 711 aaPredicted RBP19.14■□□□□ 0.65
HOXB3-206ENST00000471459 NEXNQ0ZGT2 675 aa19.14■□□□□ 0.65
HOXB3-206ENST00000471459 MYD88Q99836 296 aa19.14■□□□□ 0.65
HOXB3-206ENST00000471459 EIF6P56537 245 aaKnown RBP19.13■□□□□ 0.65
HOXB3-206ENST00000471459 SP8Q8IXZ3 490 aa19.13■□□□□ 0.65
HOXB3-206ENST00000471459 LARGE2Q8N3Y3 721 aa19.13■□□□□ 0.65
HOXB3-206ENST00000471459 ZBTB38Q8NAP3 1195 aaPredicted RBP19.13■□□□□ 0.65
HOXB3-206ENST00000471459 CCDC191Q8NCU4 936 aa19.13■□□□□ 0.65
HOXB3-206ENST00000471459 ZNF428Q96B54 188 aa19.13■□□□□ 0.65
HOXB3-206ENST00000471459 VPS33BQ9H267 617 aa19.13■□□□□ 0.65
HOXB3-206ENST00000471459 MYH16Q9H6N6 1097 aa19.13■□□□□ 0.65
HOXB3-206ENST00000471459 ABCC4O15439 1325 aa19.13■□□□□ 0.65
HOXB3-206ENST00000471459 FER1L6Q2WGJ9 1857 aa19.12■□□□□ 0.65
HOXB3-206ENST00000471459 IRS4O14654 1257 aaPredicted RBP19.12■□□□□ 0.65
HOXB3-206ENST00000471459 SLC4A2P04920 1241 aa19.12■□□□□ 0.65
HOXB3-206ENST00000471459 GRAPQ13588 217 aa19.12■□□□□ 0.65
HOXB3-206ENST00000471459 RTL5Q5HYW3 569 aaPredicted RBP19.12■□□□□ 0.65
HOXB3-206ENST00000471459 KSR2Q6VAB6 950 aa19.12■□□□□ 0.65
HOXB3-206ENST00000471459 GRAPLQ8TC17 118 aaPredicted RBP19.12■□□□□ 0.65
HOXB3-206ENST00000471459 METTL22Q9BUU2 404 aaPredicted RBP19.12■□□□□ 0.65
HOXB3-206ENST00000471459 CWC25Q9NXE8 425 aaPredicted RBP19.12■□□□□ 0.65
HOXB3-206ENST00000471459 SF3B3Q15393 1217 aaKnown RBP19.11■□□□□ 0.65
HOXB3-206ENST00000471459 DPP8Q6V1X1 898 aaPredicted RBP19.11■□□□□ 0.65
HOXB3-206ENST00000471459 MPNDQ8N594 471 aa19.11■□□□□ 0.65
HOXB3-206ENST00000471459 MAP3K2Q9Y2U5 619 aa19.11■□□□□ 0.65
HOXB3-206ENST00000471459 PI4KAP2A4QPH2 592 aa19.1■□□□□ 0.65
HOXB3-206ENST00000471459 PI4KAP1Q8N8J0 262 aa19.1■□□□□ 0.65
HOXB3-206ENST00000471459 ARFGEF2Q9Y6D5 1785 aa19.1■□□□□ 0.65
HOXB3-206ENST00000471459 FANCIQ9NVI1 1328 aa19.09■□□□□ 0.65
HOXB3-206ENST00000471459 TNRC6CQ9HCJ0 1690 aaKnown RBP19.09■□□□□ 0.65
HOXB3-206ENST00000471459 FZD9O00144 591 aa19.09■□□□□ 0.65
HOXB3-206ENST00000471459 PPIP5K2O43314 1243 aa19.09■□□□□ 0.65
HOXB3-206ENST00000471459 PCCAP05165 728 aaPredicted RBP19.09■□□□□ 0.65
HOXB3-206ENST00000471459 NIM1KQ8IY84 436 aa19.09■□□□□ 0.65
HOXB3-206ENST00000471459 CACNA1SQ13698 1873 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms