RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 PPM1GO15355 546 aaPredicted RBP7.98□□□□□ -1.13
SMNDC1-204ENST00000471297 GPR37L1O60883 481 aa7.98□□□□□ -1.13
SMNDC1-204ENST00000471297 IRF5Q13568 498 aa7.98□□□□□ -1.13
SMNDC1-204ENST00000471297 RC3H1Q5TC82 1133 aaKnown RBP7.98□□□□□ -1.13
SMNDC1-204ENST00000471297 ZNF697Q5TEC3 545 aa7.98□□□□□ -1.13
SMNDC1-204ENST00000471297 BPHLQ86WA6 291 aaPredicted RBP7.98□□□□□ -1.13
SMNDC1-204ENST00000471297 CCDC146Q8IYE0 955 aa7.98□□□□□ -1.13
SMNDC1-204ENST00000471297 ABTB2Q8N961 1025 aa7.98□□□□□ -1.13
SMNDC1-204ENST00000471297 C1orf167Q5SNV9 1468 aa7.98□□□□□ -1.13
SMNDC1-204ENST00000471297 STRCQ7RTU9 1775 aa7.97□□□□□ -1.13
SMNDC1-204ENST00000471297 A6NJR5 290 aa7.97□□□□□ -1.13
SMNDC1-204ENST00000471297 U2SURPO15042 1029 aaKnown RBP7.97□□□□□ -1.13
SMNDC1-204ENST00000471297 NEFLP07196 543 aa7.97□□□□□ -1.13
SMNDC1-204ENST00000471297 NEFMP07197 916 aa7.97□□□□□ -1.13
SMNDC1-204ENST00000471297 IL13P35225 146 aa7.97□□□□□ -1.13
SMNDC1-204ENST00000471297 SH3BP5LQ7L8J4 393 aa7.97□□□□□ -1.13
SMNDC1-204ENST00000471297 ORAI2Q96SN7 254 aa7.97□□□□□ -1.13
SMNDC1-204ENST00000471297 ARHGAP9Q9BRR9 750 aa7.97□□□□□ -1.13
SMNDC1-204ENST00000471297 GPSM3Q9Y4H4 160 aa7.97□□□□□ -1.13
SMNDC1-204ENST00000471297 EMILIN1Q9Y6C2 1016 aa7.97□□□□□ -1.13
SMNDC1-204ENST00000471297 COL3A1P02461 1466 aaPredicted RBP7.97□□□□□ -1.13
SMNDC1-204ENST00000471297 CDK12Q9NYV4 1490 aaPredicted RBP7.97□□□□□ -1.13
SMNDC1-204ENST00000471297 RGPD8O14715 1765 aaPredicted RBP7.97□□□□□ -1.13
SMNDC1-204ENST00000471297 KIF24Q5T7B8 1368 aa7.97□□□□□ -1.13
SMNDC1-204ENST00000471297 SHPRHQ149N8 1683 aa7.96□□□□□ -1.13
SMNDC1-204ENST00000471297 ZBBXA8MT70 800 aa7.96□□□□□ -1.14
SMNDC1-204ENST00000471297 FOXO3O43524 673 aa7.96□□□□□ -1.14
SMNDC1-204ENST00000471297 FBLN1P23142 703 aa7.96□□□□□ -1.14
SMNDC1-204ENST00000471297 RRS1Q15050 365 aaKnown RBP7.96□□□□□ -1.14
SMNDC1-204ENST00000471297 CCDC27Q2M243 656 aa7.96□□□□□ -1.14
SMNDC1-204ENST00000471297 C4orf48Q5BLP8 95 aa7.96□□□□□ -1.14
SMNDC1-204ENST00000471297 KRT28Q7Z3Y7 464 aa7.96□□□□□ -1.14
SMNDC1-204ENST00000471297 SH3RF1Q7Z6J0 888 aa7.96□□□□□ -1.14
SMNDC1-204ENST00000471297 ZBTB33Q86T24 672 aa7.96□□□□□ -1.14
SMNDC1-204ENST00000471297 WWC1Q8IX03 1113 aa7.96□□□□□ -1.14
SMNDC1-204ENST00000471297 KCNH5Q8NCM2 988 aa7.96□□□□□ -1.14
SMNDC1-204ENST00000471297 PLEKHF1Q96S99 279 aa7.96□□□□□ -1.14
SMNDC1-204ENST00000471297 OCSTAMPQ9BR26 566 aa7.96□□□□□ -1.14
SMNDC1-204ENST00000471297 ZNF521Q96K83 1311 aa7.96□□□□□ -1.14
SMNDC1-204ENST00000471297 MST1RQ04912 1400 aa7.95□□□□□ -1.14
SMNDC1-204ENST00000471297 LRRC7Q96NW7 1537 aa7.95□□□□□ -1.14
SMNDC1-204ENST00000471297 MAGEB6P1A0A0J9YX57 407 aa7.95□□□□□ -1.14
SMNDC1-204ENST00000471297 FBXO45P0C2W1 286 aa7.95□□□□□ -1.14
SMNDC1-204ENST00000471297 VARSP26640 1264 aaKnown RBP7.95□□□□□ -1.14
SMNDC1-204ENST00000471297 AMPHP49418 695 aa7.95□□□□□ -1.14
SMNDC1-204ENST00000471297 FOXC1Q12948 553 aa7.95□□□□□ -1.14
SMNDC1-204ENST00000471297 NR1H3Q13133 447 aa7.95□□□□□ -1.14
SMNDC1-204ENST00000471297 WASHC4Q2M389 1173 aa7.95□□□□□ -1.14
SMNDC1-204ENST00000471297 WDR63Q8IWG1 891 aa7.95□□□□□ -1.14
SMNDC1-204ENST00000471297 TCP11L2Q8N4U5 519 aa7.95□□□□□ -1.14
SMNDC1-204ENST00000471297 EHBP1Q8NDI1 1231 aa7.95□□□□□ -1.14
SMNDC1-204ENST00000471297 SUPT16HQ9Y5B9 1047 aaKnown RBP7.95□□□□□ -1.14
SMNDC1-204ENST00000471297 ZNF335Q9H4Z2 1342 aaPredicted RBP7.95□□□□□ -1.14
SMNDC1-204ENST00000471297 MAPK8IP3Q9UPT6 1336 aa7.95□□□□□ -1.14
SMNDC1-204ENST00000471297 KIF1AQ12756 1690 aa7.95□□□□□ -1.14
SMNDC1-204ENST00000471297 SBNO1A3KN83 1393 aa7.95□□□□□ -1.14
SMNDC1-204ENST00000471297 STRCP1A6NGW2 1772 aa7.94□□□□□ -1.14
SMNDC1-204ENST00000471297 E9PSI1 815 aa7.94□□□□□ -1.14
SMNDC1-204ENST00000471297 WNT7AO00755 349 aa7.94□□□□□ -1.14
SMNDC1-204ENST00000471297 VAC14Q08AM6 782 aa7.94□□□□□ -1.14
SMNDC1-204ENST00000471297 ERICH6BQ5W0A0 696 aa7.94□□□□□ -1.14
SMNDC1-204ENST00000471297 FNBP4Q8N3X1 1017 aaPredicted RBP7.94□□□□□ -1.14
SMNDC1-204ENST00000471297 ZNF330Q9Y3S2 320 aaPredicted RBP7.94□□□□□ -1.14
SMNDC1-204ENST00000471297 NPHP3Q7Z494 1330 aa7.94□□□□□ -1.14
SMNDC1-204ENST00000471297 MAP2P11137 1827 aaKnown RBP7.94□□□□□ -1.14
SMNDC1-204ENST00000471297 USP54Q70EL1 1684 aa7.93□□□□□ -1.14
SMNDC1-204ENST00000471297 SENP3-EIF4A1A0A087X0R7 540 aa7.93□□□□□ -1.14
SMNDC1-204ENST00000471297 TMPOP42166 694 aaKnown RBP7.93□□□□□ -1.14
SMNDC1-204ENST00000471297 SLFN5Q08AF3 891 aa7.93□□□□□ -1.14
SMNDC1-204ENST00000471297 EIF4A2Q14240 407 aaKnown RBP7.93□□□□□ -1.14
SMNDC1-204ENST00000471297 NUTM2GQ5VZR2 741 aa7.93□□□□□ -1.14
SMNDC1-204ENST00000471297 TRMT2AQ8IZ69 625 aaKnown RBP7.93□□□□□ -1.14
SMNDC1-204ENST00000471297 ADAM32Q8TC27 787 aa7.93□□□□□ -1.14
SMNDC1-204ENST00000471297 MRGPRX2Q96LB1 330 aa7.93□□□□□ -1.14
SMNDC1-204ENST00000471297 PKD2L1Q9P0L9 805 aa7.93□□□□□ -1.14
SMNDC1-204ENST00000471297 SLAIN2Q9P270 581 aa7.93□□□□□ -1.14
SMNDC1-204ENST00000471297 MAP3K19Q56UN5 1328 aa7.93□□□□□ -1.14
SMNDC1-204ENST00000471297 FLT4P35916 1363 aa7.93□□□□□ -1.14
SMNDC1-204ENST00000471297 PIK3C2AO00443 1686 aa7.92□□□□□ -1.14
SMNDC1-204ENST00000471297 SIAH2O43255 324 aa7.92□□□□□ -1.14
SMNDC1-204ENST00000471297 TRAK2O60296 914 aa7.92□□□□□ -1.14
SMNDC1-204ENST00000471297 GDF9O60383 454 aa7.92□□□□□ -1.14
SMNDC1-204ENST00000471297 PRKAR2BP31323 418 aa7.92□□□□□ -1.14
SMNDC1-204ENST00000471297 DUSP27Q5VZP5 1158 aa7.92□□□□□ -1.14
SMNDC1-204ENST00000471297 FAM174AQ8TBP5 190 aa7.92□□□□□ -1.14
SMNDC1-204ENST00000471297 RTL1A6NKG5 1358 aa7.92□□□□□ -1.14
SMNDC1-204ENST00000471297 IQSEC2Q5JU85 1478 aa7.92□□□□□ -1.14
SMNDC1-204ENST00000471297 GCP02774 474 aa7.91□□□□□ -1.14
SMNDC1-204ENST00000471297 HOXC9P31274 260 aa7.91□□□□□ -1.14
SMNDC1-204ENST00000471297 RIPK4P57078 832 aa7.91□□□□□ -1.14
SMNDC1-204ENST00000471297 LMOD3Q0VAK6 560 aa7.91□□□□□ -1.14
SMNDC1-204ENST00000471297 ERFEQ4G0M1 354 aa7.91□□□□□ -1.14
SMNDC1-204ENST00000471297 HSP90AB2PQ58FF8 381 aa7.91□□□□□ -1.14
SMNDC1-204ENST00000471297 IP6K1Q92551 441 aa7.91□□□□□ -1.14
SMNDC1-204ENST00000471297 RCAN3Q9UKA8 241 aa7.91□□□□□ -1.14
SMNDC1-204ENST00000471297 USP19O94966 1318 aa7.91□□□□□ -1.14
SMNDC1-204ENST00000471297 RNF123Q5XPI4 1314 aa7.91□□□□□ -1.14
SMNDC1-204ENST00000471297 ARHGEF10O15013 1369 aa7.9□□□□□ -1.14
SMNDC1-204ENST00000471297 IL16Q14005 1332 aa7.9□□□□□ -1.14
SMNDC1-204ENST00000471297 TNFRSF10AO00220 468 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 432.4 ms