RNA–Protein interactions for RNA: ENST00000471226.5

ABCF3-208, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-208ENST00000471226 ERFEQ4G0M1 354 aa19.49■□□□□ 0.71
ABCF3-208ENST00000471226 G2E3Q7L622 706 aa19.49■□□□□ 0.71
ABCF3-208ENST00000471226 RIC3Q7Z5B4 369 aa19.49■□□□□ 0.71
ABCF3-208ENST00000471226 RNF123Q5XPI4 1314 aa19.49■□□□□ 0.71
ABCF3-208ENST00000471226 DDX58O95786 925 aaKnown RBP19.48■□□□□ 0.71
ABCF3-208ENST00000471226 SRGNP10124 158 aa19.48■□□□□ 0.71
ABCF3-208ENST00000471226 TRIM28Q13263 835 aaKnown RBP19.48■□□□□ 0.71
ABCF3-208ENST00000471226 TTLL6Q8N841 843 aa19.48■□□□□ 0.71
ABCF3-208ENST00000471226 UTP14AQ9BVJ6 771 aaKnown RBP19.48■□□□□ 0.71
ABCF3-208ENST00000471226 SLX4Q8IY92 1834 aa19.48■□□□□ 0.71
ABCF3-208ENST00000471226 LAMB2P55268 1798 aa19.47■□□□□ 0.71
ABCF3-208ENST00000471226 SLC10A5Q5PT55 438 aa19.47■□□□□ 0.71
ABCF3-208ENST00000471226 STYK1Q6J9G0 422 aa19.46■□□□□ 0.71
ABCF3-208ENST00000471226 KSR2Q6VAB6 950 aa19.46■□□□□ 0.71
ABCF3-208ENST00000471226 MASTLQ96GX5 879 aa19.46■□□□□ 0.71
ABCF3-208ENST00000471226 METTL22Q9BUU2 404 aaPredicted RBP19.46■□□□□ 0.71
ABCF3-208ENST00000471226 ADCY9O60503 1353 aa19.45■□□□□ 0.7
ABCF3-208ENST00000471226 DDX60Q8IY21 1712 aaKnown RBP19.45■□□□□ 0.7
ABCF3-208ENST00000471226 PI4KAP2A4QPH2 592 aa19.45■□□□□ 0.7
ABCF3-208ENST00000471226 ATP5J2-PTCD1G3V325 749 aa19.45■□□□□ 0.7
ABCF3-208ENST00000471226 FLIIQ13045 1269 aa19.45■□□□□ 0.7
ABCF3-208ENST00000471226 PI4KAP1Q8N8J0 262 aa19.45■□□□□ 0.7
ABCF3-208ENST00000471226 ZNF622Q969S3 477 aaKnown RBP eCLIP19.45■□□□□ 0.7
ABCF3-208ENST00000471226 MAP3K2Q9Y2U5 619 aa19.45■□□□□ 0.7
ABCF3-208ENST00000471226 SBF1O95248 1867 aa19.45■□□□□ 0.7
ABCF3-208ENST00000471226 NPR1P16066 1061 aa19.44■□□□□ 0.7
ABCF3-208ENST00000471226 CRY2Q49AN0 593 aa19.44■□□□□ 0.7
ABCF3-208ENST00000471226 CNKSR1Q969H4 720 aa19.44■□□□□ 0.7
ABCF3-208ENST00000471226 MYD88Q99836 296 aa19.44■□□□□ 0.7
ABCF3-208ENST00000471226 TRMT112Q9UI30 125 aaKnown RBP19.44■□□□□ 0.7
ABCF3-208ENST00000471226 YY1P25490 414 aa19.43■□□□□ 0.7
ABCF3-208ENST00000471226 FER1L6Q2WGJ9 1857 aa19.43■□□□□ 0.7
ABCF3-208ENST00000471226 CCDC88AQ3V6T2 1871 aa19.42■□□□□ 0.7
ABCF3-208ENST00000471226 HNRNPUQ00839 825 aaKnown RBP eCLIP19.42■□□□□ 0.7
ABCF3-208ENST00000471226 SYNE4Q8N205 404 aa19.42■□□□□ 0.7
ABCF3-208ENST00000471226 SH3TC1Q8TE82 1336 aa19.42■□□□□ 0.7
ABCF3-208ENST00000471226 ARHGAP27Q6ZUM4 889 aa19.41■□□□□ 0.7
ABCF3-208ENST00000471226 C3orf67Q6ZVT6 689 aa19.41■□□□□ 0.7
ABCF3-208ENST00000471226 CCDC191Q8NCU4 936 aa19.41■□□□□ 0.7
ABCF3-208ENST00000471226 ZNF428Q96B54 188 aa19.41■□□□□ 0.7
ABCF3-208ENST00000471226 NLRP3Q96P20 1036 aa19.41■□□□□ 0.7
ABCF3-208ENST00000471226 ALDH1B1P30837 517 aa19.4■□□□□ 0.7
ABCF3-208ENST00000471226 HOXA10P31260 410 aaPredicted RBP19.4■□□□□ 0.7
ABCF3-208ENST00000471226 FKBP5Q13451 457 aaPredicted RBP19.4■□□□□ 0.7
ABCF3-208ENST00000471226 PRPF40BQ6NWY9 871 aaKnown RBP19.4■□□□□ 0.7
ABCF3-208ENST00000471226 IGKV5-2P06315 115 aa19.39■□□□□ 0.69
ABCF3-208ENST00000471226 HCLS1P14317 486 aaPredicted RBP19.39■□□□□ 0.69
ABCF3-208ENST00000471226 FAM89AQ96GI7 184 aa19.39■□□□□ 0.69
ABCF3-208ENST00000471226 CT47B1P0C2W7 299 aaPredicted RBP19.38■□□□□ 0.69
ABCF3-208ENST00000471226 TAF1P21675 1872 aa19.38■□□□□ 0.69
ABCF3-208ENST00000471226 NEXNQ0ZGT2 675 aa19.38■□□□□ 0.69
ABCF3-208ENST00000471226 MRPL50Q8N5N7 158 aaKnown RBP19.38■□□□□ 0.69
ABCF3-208ENST00000471226 ZBTB38Q8NAP3 1195 aaPredicted RBP19.38■□□□□ 0.69
ABCF3-208ENST00000471226 C7orf43Q8WVR3 580 aa19.38■□□□□ 0.69
ABCF3-208ENST00000471226 DNAAF4Q8WXU2 420 aa19.38■□□□□ 0.69
ABCF3-208ENST00000471226 CWC25Q9NXE8 425 aaPredicted RBP19.38■□□□□ 0.69
ABCF3-208ENST00000471226 C21orf2O43822 256 aa19.37■□□□□ 0.69
ABCF3-208ENST00000471226 PCCAP05165 728 aaPredicted RBP19.37■□□□□ 0.69
ABCF3-208ENST00000471226 SSH1Q8WYL5 1049 aa19.37■□□□□ 0.69
ABCF3-208ENST00000471226 RPGRQ92834 1020 aaKnown RBP19.37■□□□□ 0.69
ABCF3-208ENST00000471226 CRAMP1Q96RY5 1269 aa19.37■□□□□ 0.69
ABCF3-208ENST00000471226 MYH3P11055 1940 aa19.37■□□□□ 0.69
ABCF3-208ENST00000471226 DICER1Q9UPY3 1922 aaKnown RBP19.36■□□□□ 0.69
ABCF3-208ENST00000471226 NEURL1BA8MQ27 555 aa19.36■□□□□ 0.69
ABCF3-208ENST00000471226 CWF19L2Q2TBE0 894 aaKnown RBP19.36■□□□□ 0.69
ABCF3-208ENST00000471226 ALDH1L2Q3SY69 923 aa19.36■□□□□ 0.69
ABCF3-208ENST00000471226 RBM17Q96I25 401 aaKnown RBP19.36■□□□□ 0.69
ABCF3-208ENST00000471226 IRS4O14654 1257 aaPredicted RBP19.35■□□□□ 0.69
ABCF3-208ENST00000471226 RTL5Q5HYW3 569 aaPredicted RBP19.35■□□□□ 0.69
ABCF3-208ENST00000471226 ZNF219Q9P2Y4 722 aaPredicted RBP19.35■□□□□ 0.69
ABCF3-208ENST00000471226 ZBED9Q6R2W3 1325 aa19.34■□□□□ 0.69
ABCF3-208ENST00000471226 F6X3S4 739 aa19.34■□□□□ 0.69
ABCF3-208ENST00000471226 NFKBIEO00221 500 aa19.34■□□□□ 0.69
ABCF3-208ENST00000471226 SF3B3Q15393 1217 aaKnown RBP19.34■□□□□ 0.69
ABCF3-208ENST00000471226 SOGA3Q5TF21 947 aa19.34■□□□□ 0.69
ABCF3-208ENST00000471226 LINS1Q8NG48 757 aa19.34■□□□□ 0.69
ABCF3-208ENST00000471226 CDHR2Q9BYE9 1310 aa19.33■□□□□ 0.69
ABCF3-208ENST00000471226 ABCC4O15439 1325 aa19.32■□□□□ 0.68
ABCF3-208ENST00000471226 H7C1W4 665 aa19.32■□□□□ 0.68
ABCF3-208ENST00000471226 HSP90B1P14625 803 aaKnown RBP19.32■□□□□ 0.68
ABCF3-208ENST00000471226 PRELPP51888 382 aa19.32■□□□□ 0.68
ABCF3-208ENST00000471226 RASSF7Q02833 373 aa19.32■□□□□ 0.68
ABCF3-208ENST00000471226 GCKRQ14397 625 aa19.32■□□□□ 0.68
ABCF3-208ENST00000471226 BEND3Q5T5X7 828 aa19.32■□□□□ 0.68
ABCF3-208ENST00000471226 JARID2Q92833 1246 aaPredicted RBP19.32■□□□□ 0.68
ABCF3-208ENST00000471226 SNED1Q8TER0 1413 aa19.32■□□□□ 0.68
ABCF3-208ENST00000471226 PTPRCP08575 1304 aa19.31■□□□□ 0.68
ABCF3-208ENST00000471226 LTBP3Q9NS15 1303 aa19.31■□□□□ 0.68
ABCF3-208ENST00000471226 CCDC93Q567U6 631 aa19.31■□□□□ 0.68
ABCF3-208ENST00000471226 PDE8AO60658 829 aa19.3■□□□□ 0.68
ABCF3-208ENST00000471226 LMNB1P20700 586 aa19.3■□□□□ 0.68
ABCF3-208ENST00000471226 BRPF1P55201 1214 aaPredicted RBP19.3■□□□□ 0.68
ABCF3-208ENST00000471226 C9orf131Q5VYM1 1079 aa19.3■□□□□ 0.68
ABCF3-208ENST00000471226 OLFM4Q6UX06 510 aa19.3■□□□□ 0.68
ABCF3-208ENST00000471226 DDX46Q7L014 1031 aaKnown RBP19.3■□□□□ 0.68
ABCF3-208ENST00000471226 BCL2L13Q9BXK5 485 aa19.3■□□□□ 0.68
ABCF3-208ENST00000471226 PPEF1O14829 653 aaPredicted RBP19.29■□□□□ 0.68
ABCF3-208ENST00000471226 BBOX1O75936 387 aa19.29■□□□□ 0.68
ABCF3-208ENST00000471226 RARSP54136 660 aaKnown RBP19.29■□□□□ 0.68
ABCF3-208ENST00000471226 CASP7P55210 303 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms