RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 TJP1Q07157 1748 aa8.26□□□□□ -1.09
VARS-222ENST00000470953 PTCD1O75127 700 aaKnown RBP8.26□□□□□ -1.09
VARS-222ENST00000470953 HIRAP54198 1017 aaPredicted RBP8.26□□□□□ -1.09
VARS-222ENST00000470953 STYK1Q6J9G0 422 aa8.26□□□□□ -1.09
VARS-222ENST00000470953 SYMPKQ92797 1274 aaKnown RBP8.26□□□□□ -1.09
VARS-222ENST00000470953 GUCD1Q96NT3 240 aa8.26□□□□□ -1.09
VARS-222ENST00000470953 GPRC5DQ9NZD1 345 aa8.26□□□□□ -1.09
VARS-222ENST00000470953 STAP2Q9UGK3 403 aa8.26□□□□□ -1.09
VARS-222ENST00000470953 PDZRN3Q9UPQ7 1066 aa8.26□□□□□ -1.09
VARS-222ENST00000470953 SPG7Q9UQ90 795 aa8.26□□□□□ -1.09
VARS-222ENST00000470953 PTPN22Q9Y2R2 807 aa8.26□□□□□ -1.09
VARS-222ENST00000470953 ZBTB7BO15156 539 aaPredicted RBP8.25□□□□□ -1.09
VARS-222ENST00000470953 C2orf69Q8N8R5 385 aa8.25□□□□□ -1.09
VARS-222ENST00000470953 JDP2Q8WYK2 163 aa8.25□□□□□ -1.09
VARS-222ENST00000470953 ZNF333Q96JL9 665 aa8.25□□□□□ -1.09
VARS-222ENST00000470953 TERF2IPQ9NYB0 399 aa8.25□□□□□ -1.09
VARS-222ENST00000470953 NCAPD2Q15021 1401 aa8.24□□□□□ -1.09
VARS-222ENST00000470953 MYCP01106 439 aaPredicted RBP8.24□□□□□ -1.09
VARS-222ENST00000470953 SRGNP10124 158 aa8.24□□□□□ -1.09
VARS-222ENST00000470953 PRR5LQ6MZQ0 368 aa8.24□□□□□ -1.09
VARS-222ENST00000470953 IFNL2Q8IZJ0 200 aa8.24□□□□□ -1.09
VARS-222ENST00000470953 TRPM4Q8TD43 1214 aa8.24□□□□□ -1.09
VARS-222ENST00000470953 GGNBP2Q9H3C7 697 aa8.24□□□□□ -1.09
VARS-222ENST00000470953 NARFQ9UHQ1 456 aa8.24□□□□□ -1.09
VARS-222ENST00000470953 MRC1P22897 1456 aa8.24□□□□□ -1.09
VARS-222ENST00000470953 FYB1O15117 783 aa8.23□□□□□ -1.09
VARS-222ENST00000470953 SLC4A8Q2Y0W8 1093 aa8.23□□□□□ -1.09
VARS-222ENST00000470953 MASTLQ96GX5 879 aa8.23□□□□□ -1.09
VARS-222ENST00000470953 SOS1Q07889 1333 aaPredicted RBP8.23□□□□□ -1.09
VARS-222ENST00000470953 ROCK2O75116 1388 aaKnown RBP8.22□□□□□ -1.09
VARS-222ENST00000470953 SNED1Q8TER0 1413 aa8.22□□□□□ -1.09
VARS-222ENST00000470953 ERVV-2B6SEH9 535 aa8.22□□□□□ -1.09
VARS-222ENST00000470953 ADM5C9JUS6 153 aa8.22□□□□□ -1.09
VARS-222ENST00000470953 ZC3H15Q8WU90 426 aaKnown RBP8.22□□□□□ -1.09
VARS-222ENST00000470953 L3MBTL2Q969R5 705 aa8.22□□□□□ -1.09
VARS-222ENST00000470953 EYA1Q99502 592 aa8.22□□□□□ -1.09
VARS-222ENST00000470953 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.22□□□□□ -1.09
VARS-222ENST00000470953 EMILIN1Q9Y6C2 1016 aa8.22□□□□□ -1.09
VARS-222ENST00000470953 FLT4P35916 1363 aa8.22□□□□□ -1.09
VARS-222ENST00000470953 TONSLQ96HA7 1378 aa8.22□□□□□ -1.09
VARS-222ENST00000470953 BCAMP50895 628 aa8.21□□□□□ -1.1
VARS-222ENST00000470953 TRIM26Q12899 539 aaPredicted RBP8.21□□□□□ -1.1
VARS-222ENST00000470953 DNAJC10Q8IXB1 793 aa8.21□□□□□ -1.1
VARS-222ENST00000470953 RTKN2Q8IZC4 609 aa8.21□□□□□ -1.1
VARS-222ENST00000470953 SHISA4Q96DD7 197 aa8.21□□□□□ -1.1
VARS-222ENST00000470953 P2RX7Q99572 595 aaKnown RBP8.21□□□□□ -1.1
VARS-222ENST00000470953 ARIH1Q9Y4X5 557 aaPredicted RBP8.21□□□□□ -1.1
VARS-222ENST00000470953 NR2E3Q9Y5X4 410 aa8.21□□□□□ -1.1
VARS-222ENST00000470953 IRS2Q9Y4H2 1338 aa8.21□□□□□ -1.1
VARS-222ENST00000470953 COL15A1P39059 1388 aa8.21□□□□□ -1.1
VARS-222ENST00000470953 ZNF609O15014 1411 aa8.2□□□□□ -1.1
VARS-222ENST00000470953 SHTN1A0MZ66 631 aa8.2□□□□□ -1.1
VARS-222ENST00000470953 TM4SF4P48230 202 aa8.2□□□□□ -1.1
VARS-222ENST00000470953 GMPSP49915 693 aaPredicted RBP8.2□□□□□ -1.1
VARS-222ENST00000470953 CAP1Q01518 475 aa8.2□□□□□ -1.1
VARS-222ENST00000470953 LRIT3Q3SXY7 679 aa8.2□□□□□ -1.1
VARS-222ENST00000470953 TBC1D9BQ66K14 1250 aa8.2□□□□□ -1.1
VARS-222ENST00000470953 FAM161BQ96MY7 647 aa8.2□□□□□ -1.1
VARS-222ENST00000470953 CFHR5Q9BXR6 569 aa8.2□□□□□ -1.1
VARS-222ENST00000470953 CDH23Q9H251 3354 aa8.19□□□□□ -1.1
VARS-222ENST00000470953 CABP4P57796 275 aa8.19□□□□□ -1.1
VARS-222ENST00000470953 NEUROD1Q13562 356 aa8.19□□□□□ -1.1
VARS-222ENST00000470953 KRT26Q7Z3Y9 468 aa8.19□□□□□ -1.1
VARS-222ENST00000470953 MAFAQ8NHW3 353 aaPredicted RBP8.19□□□□□ -1.1
VARS-222ENST00000470953 CD99L2Q8TCZ2 262 aa8.19□□□□□ -1.1
VARS-222ENST00000470953 HCN4Q9Y3Q4 1203 aa8.19□□□□□ -1.1
VARS-222ENST00000470953 POLR2AP24928 1970 aaKnown RBP8.19□□□□□ -1.1
VARS-222ENST00000470953 PPM1GO15355 546 aaPredicted RBP8.18□□□□□ -1.1
VARS-222ENST00000470953 CYP19A1P11511 503 aaPredicted RBP8.18□□□□□ -1.1
VARS-222ENST00000470953 TJAP1Q5JTD0 557 aa8.18□□□□□ -1.1
VARS-222ENST00000470953 LARGE2Q8N3Y3 721 aa8.18□□□□□ -1.1
VARS-222ENST00000470953 NFATC2IPQ8NCF5 419 aa8.18□□□□□ -1.1
VARS-222ENST00000470953 PSMD1Q99460 953 aa8.18□□□□□ -1.1
VARS-222ENST00000470953 HTATIP2Q9BUP3 242 aa8.18□□□□□ -1.1
VARS-222ENST00000470953 ZBTB1Q9Y2K1 713 aa8.18□□□□□ -1.1
VARS-222ENST00000470953 MUC6Q6W4X9 2439 aa8.17□□□□□ -1.1
VARS-222ENST00000470953 MKRN3Q13064 507 aaKnown RBP8.17□□□□□ -1.1
VARS-222ENST00000470953 SLC9C1Q4G0N8 1177 aa8.17□□□□□ -1.1
VARS-222ENST00000470953 UBE2Q1Q7Z7E8 422 aa8.17□□□□□ -1.1
VARS-222ENST00000470953 GDF15Q99988 308 aa8.17□□□□□ -1.1
VARS-222ENST00000470953 ZBTB12Q9Y330 459 aaPredicted RBP8.17□□□□□ -1.1
VARS-222ENST00000470953 NPC1L1Q9UHC9 1359 aa8.17□□□□□ -1.1
VARS-222ENST00000470953 CACNA1GO43497 2377 aa8.17□□□□□ -1.1
VARS-222ENST00000470953 BMP8BP34820 402 aa8.16□□□□□ -1.1
VARS-222ENST00000470953 MRE11P49959 708 aa8.16□□□□□ -1.1
VARS-222ENST00000470953 KIF24Q5T7B8 1368 aa8.16□□□□□ -1.1
VARS-222ENST00000470953 KDM3BQ7LBC6 1761 aa8.16□□□□□ -1.1
VARS-222ENST00000470953 PKD1L2Q7Z442 2459 aa8.16□□□□□ -1.1
VARS-222ENST00000470953 SLC51AQ86UW1 340 aa8.16□□□□□ -1.1
VARS-222ENST00000470953 CNBD1Q8NA66 436 aa8.16□□□□□ -1.1
VARS-222ENST00000470953 EFCC1Q9HA90 598 aa8.16□□□□□ -1.1
VARS-222ENST00000470953 PTCH2Q9Y6C5 1203 aa8.16□□□□□ -1.1
VARS-222ENST00000470953 BDP1A6H8Y1 2624 aa8.15□□□□□ -1.1
VARS-222ENST00000470953 NPR1P16066 1061 aa8.15□□□□□ -1.1
VARS-222ENST00000470953 CXCL9Q07325 125 aa8.15□□□□□ -1.1
VARS-222ENST00000470953 MOB2Q70IA6 237 aa8.15□□□□□ -1.1
VARS-222ENST00000470953 NBPF11Q86T75 865 aa8.15□□□□□ -1.1
VARS-222ENST00000470953 NIM1KQ8IY84 436 aa8.15□□□□□ -1.1
VARS-222ENST00000470953 ERO1AQ96HE7 468 aa8.15□□□□□ -1.1
VARS-222ENST00000470953 SCN7AQ01118 1682 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms