RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 ARSDP51689 593 aa6.66□□□□□ -1.34
PRPF3-204ENST00000470824 ATP2B2Q01814 1243 aa6.66□□□□□ -1.34
PRPF3-204ENST00000470824 LRRC69Q6ZNQ3 347 aa6.66□□□□□ -1.34
PRPF3-204ENST00000470824 ZFP42Q96MM3 310 aa6.66□□□□□ -1.34
PRPF3-204ENST00000470824 FNDC3AQ9Y2H6 1198 aaKnown RBP6.66□□□□□ -1.34
PRPF3-204ENST00000470824 A0A1W2PNR3 127 aa6.65□□□□□ -1.34
PRPF3-204ENST00000470824 PRPF40AO75400 957 aaKnown RBP6.65□□□□□ -1.34
PRPF3-204ENST00000470824 INPP5BP32019 993 aa6.65□□□□□ -1.34
PRPF3-204ENST00000470824 ITGAEP38570 1179 aa6.65□□□□□ -1.34
PRPF3-204ENST00000470824 XPCQ01831 940 aaPredicted RBP6.65□□□□□ -1.34
PRPF3-204ENST00000470824 BTLAQ7Z6A9 289 aa6.65□□□□□ -1.34
PRPF3-204ENST00000470824 CRIPAKQ8N1N5 446 aa6.65□□□□□ -1.34
PRPF3-204ENST00000470824 KLRG1Q96E93 195 aa6.65□□□□□ -1.34
PRPF3-204ENST00000470824 GGNBP2Q9H3C7 697 aa6.65□□□□□ -1.34
PRPF3-204ENST00000470824 DYRK1BQ9Y463 629 aa6.65□□□□□ -1.34
PRPF3-204ENST00000470824 WFS1O76024 890 aa6.64□□□□□ -1.35
PRPF3-204ENST00000470824 F11P03951 625 aa6.64□□□□□ -1.35
PRPF3-204ENST00000470824 EPB42P16452 691 aa6.64□□□□□ -1.35
PRPF3-204ENST00000470824 ENOX2Q16206 610 aaKnown RBP6.64□□□□□ -1.35
PRPF3-204ENST00000470824 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.64□□□□□ -1.35
PRPF3-204ENST00000470824 PGBD3Q8N328 593 aa6.64□□□□□ -1.35
PRPF3-204ENST00000470824 CRISPLD1Q9H336 500 aa6.64□□□□□ -1.35
PRPF3-204ENST00000470824 RTCBQ9Y3I0 505 aaKnown RBP6.64□□□□□ -1.35
PRPF3-204ENST00000470824 PNMA6FA0A0J9YX94 578 aa6.63□□□□□ -1.35
PRPF3-204ENST00000470824 LCE2AQ5TA79 106 aaPredicted RBP6.63□□□□□ -1.35
PRPF3-204ENST00000470824 ALG1LQ6GMV1 187 aa6.63□□□□□ -1.35
PRPF3-204ENST00000470824 NLRP8Q86W28 1048 aa6.63□□□□□ -1.35
PRPF3-204ENST00000470824 CMTR1Q8N1G2 835 aaKnown RBP6.63□□□□□ -1.35
PRPF3-204ENST00000470824 CEP63Q96MT8 703 aa6.63□□□□□ -1.35
PRPF3-204ENST00000470824 CSRNP1Q96S65 589 aa6.63□□□□□ -1.35
PRPF3-204ENST00000470824 DUSP9Q99956 384 aaKnown RBP6.63□□□□□ -1.35
PRPF3-204ENST00000470824 GPAMQ9HCL2 828 aa6.63□□□□□ -1.35
PRPF3-204ENST00000470824 DNMT3LQ9UJW3 386 aa6.63□□□□□ -1.35
PRPF3-204ENST00000470824 UBAP1LF5GYI3 381 aa6.62□□□□□ -1.35
PRPF3-204ENST00000470824 MAN1A2O60476 641 aa6.62□□□□□ -1.35
PRPF3-204ENST00000470824 EFHC2Q5JST6 749 aa6.62□□□□□ -1.35
PRPF3-204ENST00000470824 XKR5Q6UX68 686 aa6.62□□□□□ -1.35
PRPF3-204ENST00000470824 GAS2L1Q99501 681 aaPredicted RBP6.62□□□□□ -1.35
PRPF3-204ENST00000470824 DNAJC25Q9H1X3 360 aa6.62□□□□□ -1.35
PRPF3-204ENST00000470824 RUBCNLQ9H714 662 aa6.62□□□□□ -1.35
PRPF3-204ENST00000470824 IGSF5Q9NSI5 407 aa6.62□□□□□ -1.35
PRPF3-204ENST00000470824 PARP2Q9UGN5 583 aa6.62□□□□□ -1.35
PRPF3-204ENST00000470824 WWC3Q9ULE0 1092 aa6.62□□□□□ -1.35
PRPF3-204ENST00000470824 A6NHS1 94 aa6.61□□□□□ -1.35
PRPF3-204ENST00000470824 EIF1AYO14602 144 aaKnown RBP6.61□□□□□ -1.35
PRPF3-204ENST00000470824 TYRO3Q06418 890 aa6.61□□□□□ -1.35
PRPF3-204ENST00000470824 PDE12Q6L8Q7 609 aaKnown RBP6.61□□□□□ -1.35
PRPF3-204ENST00000470824 FBF1Q8TES7 1133 aa6.61□□□□□ -1.35
PRPF3-204ENST00000470824 MRS2Q9HD23 443 aa6.61□□□□□ -1.35
PRPF3-204ENST00000470824 C11orf16Q9NQ32 467 aa6.61□□□□□ -1.35
PRPF3-204ENST00000470824 USP20Q9Y2K6 914 aa6.61□□□□□ -1.35
PRPF3-204ENST00000470824 CPNE3O75131 537 aaKnown RBP6.6□□□□□ -1.35
PRPF3-204ENST00000470824 TCF3P15923 654 aa6.6□□□□□ -1.35
PRPF3-204ENST00000470824 PSMD2Q13200 908 aa6.6□□□□□ -1.35
PRPF3-204ENST00000470824 ORC1Q13415 861 aa6.6□□□□□ -1.35
PRPF3-204ENST00000470824 MRPL58Q14197 206 aaKnown RBP6.6□□□□□ -1.35
PRPF3-204ENST00000470824 LBRQ14739 615 aaKnown RBP6.6□□□□□ -1.35
PRPF3-204ENST00000470824 SAMD5Q5TGI4 173 aa6.6□□□□□ -1.35
PRPF3-204ENST00000470824 TMC4Q7Z404 712 aa6.6□□□□□ -1.35
PRPF3-204ENST00000470824 ZNF438Q7Z4V0 828 aa6.6□□□□□ -1.35
PRPF3-204ENST00000470824 ATP13A2Q9NQ11 1180 aa6.6□□□□□ -1.35
PRPF3-204ENST00000470824 KCNMB2Q9Y691 235 aa6.6□□□□□ -1.35
PRPF3-204ENST00000470824 SORBS3O60504 671 aa6.59□□□□□ -1.35
PRPF3-204ENST00000470824 XYLBO75191 536 aa6.59□□□□□ -1.35
PRPF3-204ENST00000470824 TNFRSF21O75509 655 aa6.59□□□□□ -1.35
PRPF3-204ENST00000470824 DAB2P98082 770 aa6.59□□□□□ -1.35
PRPF3-204ENST00000470824 TSNAXIP1Q2TAA8 658 aa6.59□□□□□ -1.35
PRPF3-204ENST00000470824 FIGNL1Q6PIW4 674 aa6.59□□□□□ -1.35
PRPF3-204ENST00000470824 SNX29Q8TEQ0 813 aa6.59□□□□□ -1.35
PRPF3-204ENST00000470824 FRMD6Q96NE9 622 aa6.59□□□□□ -1.35
PRPF3-204ENST00000470824 SETDB2Q96T68 719 aa6.59□□□□□ -1.35
PRPF3-204ENST00000470824 ELP3Q9H9T3 547 aa6.59□□□□□ -1.35
PRPF3-204ENST00000470824 BRD7Q9NPI1 651 aa6.59□□□□□ -1.35
PRPF3-204ENST00000470824 RECKO95980 971 aa6.58□□□□□ -1.36
PRPF3-204ENST00000470824 EGFRP00533 1210 aa6.58□□□□□ -1.36
PRPF3-204ENST00000470824 GNA15P30679 374 aa6.58□□□□□ -1.36
PRPF3-204ENST00000470824 TRIP4Q15650 581 aaPredicted RBP6.58□□□□□ -1.36
PRPF3-204ENST00000470824 RIPOR1Q6ZS17 1223 aa6.58□□□□□ -1.36
PRPF3-204ENST00000470824 FAM161BQ96MY7 647 aa6.58□□□□□ -1.36
PRPF3-204ENST00000470824 BACH2Q9BYV9 841 aa6.58□□□□□ -1.36
PRPF3-204ENST00000470824 ZCCHC2Q9C0B9 1178 aaKnown RBP6.58□□□□□ -1.36
PRPF3-204ENST00000470824 SENP3-EIF4A1A0A087X0R7 540 aa6.57□□□□□ -1.36
PRPF3-204ENST00000470824 H7C1W4 665 aa6.57□□□□□ -1.36
PRPF3-204ENST00000470824 ATXN7O15265 892 aaPredicted RBP6.57□□□□□ -1.36
PRPF3-204ENST00000470824 PHACTR2O75167 634 aa6.57□□□□□ -1.36
PRPF3-204ENST00000470824 NFX1Q12986 1120 aaKnown RBP6.57□□□□□ -1.36
PRPF3-204ENST00000470824 CFHR5Q9BXR6 569 aa6.57□□□□□ -1.36
PRPF3-204ENST00000470824 ZFYVE28Q9HCC9 887 aa6.57□□□□□ -1.36
PRPF3-204ENST00000470824 VTI1BQ9UEU0 232 aa6.57□□□□□ -1.36
PRPF3-204ENST00000470824 FOXD3Q9UJU5 478 aaPredicted RBP6.57□□□□□ -1.36
PRPF3-204ENST00000470824 KCNH4Q9UQ05 1017 aa6.57□□□□□ -1.36
PRPF3-204ENST00000470824 SPG7Q9UQ90 795 aa6.57□□□□□ -1.36
PRPF3-204ENST00000470824 PCDHGC4Q9Y5F7 938 aa6.57□□□□□ -1.36
PRPF3-204ENST00000470824 FAM157BP0CG42 384 aa6.56□□□□□ -1.36
PRPF3-204ENST00000470824 SNRPBP14678 240 aaKnown RBP6.56□□□□□ -1.36
PRPF3-204ENST00000470824 GRNP28799 593 aaKnown RBP6.56□□□□□ -1.36
PRPF3-204ENST00000470824 KCNQ4P56696 695 aa6.56□□□□□ -1.36
PRPF3-204ENST00000470824 PTSQ03393 145 aa6.56□□□□□ -1.36
PRPF3-204ENST00000470824 TTC39BQ5VTQ0 682 aaPredicted RBP6.56□□□□□ -1.36
PRPF3-204ENST00000470824 NLRP13Q86W25 1043 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms